Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_P19
         (1184 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC115039-1|AAI15040.1|  798|Homo sapiens MKL1 protein protein.         32   3.5  
AK128197-1|BAC87320.1|  161|Homo sapiens protein ( Homo sapiens ...    32   3.5  
M23618-1|AAA88076.1|   95|Homo sapiens high mobility group prote...    32   4.7  

>BC115039-1|AAI15040.1|  798|Homo sapiens MKL1 protein protein.
          Length = 798

 Score = 32.3 bits (70), Expect = 3.5
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = -1

Query: 266 SSSEDLAESF-VLVAAGGRPRFLSSFDSGCVPLAFGLPRPFFSTTVEPSSDIV 111
           SSS+ + + F +L+ +GG PR  S F    +P   G   P  S  V P S  +
Sbjct: 743 SSSQQMDDLFDILIQSGGNPRNFSRFQGAAIPAREGEAIPEDSLWVPPGSTAI 795


>AK128197-1|BAC87320.1|  161|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46325 fis, clone TESTI4043371. ).
          Length = 161

 Score = 32.3 bits (70), Expect = 3.5
 Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = -3

Query: 348 TFTLALDSRFFLGTFWSASTSFSYW-CLFIIRRLSRIFCSGGSWRPTSFFKFFRLRLCSI 172
           +F L L   FF   F S   SF ++   F+   L  +F S       SFF FFR+ LC  
Sbjct: 73  SFFLFLSFSFFFFPFLSFFLSFFFFPSFFLFSFLLSLFPSFFLSLSLSFFLFFRVSLCHP 132

Query: 171 GFWSTA 154
           G WS A
Sbjct: 133 G-WSGA 137


>M23618-1|AAA88076.1|   95|Homo sapiens high mobility group protein
           protein.
          Length = 95

 Score = 31.9 bits (69), Expect = 4.7
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +1

Query: 142 EKKGRGRPKANGTQPESKELKKRGR-PPAATRTKDSAKSSDDEQAP 276
           EK+GRGRP+    +P      KR R  P  ++ K +AK+      P
Sbjct: 22  EKRGRGRPRKQPPEPSEVPTPKRPRGRPKGSKNKGAAKTRKTTTTP 67


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,781,643
Number of Sequences: 237096
Number of extensions: 2018267
Number of successful extensions: 7685
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7685
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16623961460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)