Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_P19
(1184 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92775-3|CAB62778.2| 396|Caenorhabditis elegans Hypothetical pr... 35 0.098
AB070577-1|BAC66472.1| 396|Caenorhabditis elegans L-3,4-dihydro... 35 0.098
AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical ... 33 0.39
AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility... 33 0.39
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 31 2.1
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 29 4.9
>Z92775-3|CAB62778.2| 396|Caenorhabditis elegans Hypothetical
protein C06H5.7 protein.
Length = 396
Score = 35.1 bits (77), Expect = 0.098
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = -3
Query: 375 IFAWPSTTSTFTLALDSRFFLGTFWSASTSFSYWCLFIIRRLSRIFCSGGSWRPTSFFKF 196
+ W + ++S FF+G+FWSA S+ C + +L + W+P + K+
Sbjct: 98 VLTWHDINRDMVVVIES-FFIGSFWSAMVSY---CSLSVLKLFAV------WKPFHYRKW 147
Query: 195 FRLRLC 178
F +R C
Sbjct: 148 FTMRRC 153
>AB070577-1|BAC66472.1| 396|Caenorhabditis elegans
L-3,4-dihydroxyphenylalanine receptorprotein.
Length = 396
Score = 35.1 bits (77), Expect = 0.098
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = -3
Query: 375 IFAWPSTTSTFTLALDSRFFLGTFWSASTSFSYWCLFIIRRLSRIFCSGGSWRPTSFFKF 196
+ W + ++S FF+G+FWSA S+ C + +L + W+P + K+
Sbjct: 98 VLTWHDINRDMVVVIES-FFIGSFWSAMVSY---CSLSVLKLFAV------WKPFHYRKW 147
Query: 195 FRLRLC 178
F +R C
Sbjct: 148 FTMRRC 153
>AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical
protein Y17G7A.1 protein.
Length = 315
Score = 33.1 bits (72), Expect = 0.39
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +1
Query: 115 MSDDGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPV 279
++D GS+ V KKGRGRP N + L K+GR A + D +PV
Sbjct: 111 VNDTGSSPV-KKGRGRPIKNPSADAGSPLVKKGRGRRAQTPAADTDAIDTASSPV 164
Score = 31.1 bits (67), Expect = 1.6
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +1
Query: 121 DDGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPV 279
D S+ V KKGRGRP N + L K+GR A + D +PV
Sbjct: 158 DTASSPV-KKGRGRPAKNPSADAGSPLVKKGRGRQAKNLAADTDAIDTASSPV 209
>AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility
group protein I beta protein.
Length = 315
Score = 33.1 bits (72), Expect = 0.39
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +1
Query: 115 MSDDGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPV 279
++D GS+ V KKGRGRP N + L K+GR A + D +PV
Sbjct: 111 VNDTGSSPV-KKGRGRPIKNPSADAGSPLVKKGRGRRAQTPAADTDAIDTASSPV 164
Score = 31.1 bits (67), Expect = 1.6
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = +1
Query: 121 DDGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPV 279
D S+ V KKGRGRP N + L K+GR A + D +PV
Sbjct: 158 DTASSPV-KKGRGRPAKNPSADAGSPLVKKGRGRQAKNLAADTDAIDTASSPV 209
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 30.7 bits (66), Expect = 2.1
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 145 KKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQ 270
K+GRGRP++ T +++ + AA R+K + ++EQ
Sbjct: 572 KRGRGRPRSRSTMSITEDSEPSTSSTAAKRSKRAESDEEEEQ 613
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 30.3 bits (65), Expect = 2.8
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +1
Query: 142 EKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAPVA 282
+K + + + + E +E+K++ ++ TK +A D+E+ PVA
Sbjct: 190 KKSAKSKDDDSSDEEEEEEVKEKSPKKSSKSTKRAASDDDEEEEPVA 236
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 29.5 bits (63), Expect = 4.9
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 181 QPESKELKKRGRP-PAATRTKDSAKSSDDEQAPVA 282
+P +K + P P A + + S+ SSDDE+ PVA
Sbjct: 321 KPAAKPTPAKATPKPVAKKAESSSDSSDDEKKPVA 355
Score = 29.5 bits (63), Expect = 4.9
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 181 QPESKELKKRGRP-PAATRTKDSAKSSDDEQAPVA 282
+P +K + P P A + + S+ SSDDE+ PVA
Sbjct: 383 KPAAKPTPAKATPKPVAKKAESSSDSSDDEKKPVA 417
Score = 28.7 bits (61), Expect = 8.5
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 181 QPESKELKKRGRP-PAATRTKDSAKSSDDEQAPVA 282
+P +K P P A + + S+ SSDDE+ PVA
Sbjct: 505 KPAAKPTPANATPKPVAKKAESSSDSSDDEKKPVA 539
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,495,211
Number of Sequences: 27780
Number of extensions: 341761
Number of successful extensions: 977
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 973
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3245116438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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