Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_P18
         (1176 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    78   2e-16
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    43   6e-06
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                31   0.026
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    30   0.034
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    30   0.034
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   3.9  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    23   3.9  

>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 77.8 bits (183), Expect = 2e-16
 Identities = 40/74 (54%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
 Frame = +1

Query: 724 VLSREKGTGKLCAMKILKKHLIIQKDEVAHTITXNRVLK-KTKHPFLTALRYSFQTADRV 900
           +L+  KGT +L A+KILKK +IIQ D+V  T+   RVL   TK PFL  L   FQT DR+
Sbjct: 1   MLAERKGTDELYAIKILKKDIIIQDDDVECTMVEKRVLALSTKPPFLVQLHSCFQTMDRL 60

Query: 901 CFVMEYANGGELFF 942
            FVMEY NGG+L +
Sbjct: 61  YFVMEYVNGGDLMY 74



 Score = 41.9 bits (94), Expect = 1e-05
 Identities = 20/45 (44%), Positives = 25/45 (55%)
 Frame = +2

Query: 965  FTEDRTRFYGXEIXSALGYLHSXGIIYRDLKLXNXXXXKNGXXKL 1099
            F E    FY  EI   L +LH  GI+YRDLKL N    ++G  K+
Sbjct: 82   FKEPVAVFYASEIAIGLFFLHGRGIVYRDLKLDNVLLDQDGHIKI 126


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
            kinase foraging protein.
          Length = 678

 Score = 42.7 bits (96), Expect = 6e-06
 Identities = 22/52 (42%), Positives = 26/52 (50%)
 Frame = +2

Query: 944  ILSRERSFTEDRTRFYGXEIXSALGYLHSXGIIYRDLKLXNXXXXKNGXXKL 1099
            +L  +  F +  TRFY   +  A  YLHS  IIYRDLK  N      G  KL
Sbjct: 456  VLRDKGHFDDGTTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLDSQGYVKL 507



 Score = 23.0 bits (47), Expect = 5.2
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 1027 VQVPESRXYFGSVEPGXVLGE*TLAGQNERT 935
            V+V     Y  ++ PG VLGE  +    +RT
Sbjct: 147  VEVSRDGKYLSTLAPGKVLGELAILYNCKRT 177


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 30.7 bits (66), Expect = 0.026
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +2

Query: 1001 IXSALGYLHSXGIIYRDLKLXNXXXXKNGXXKL 1099
            I  AL + H+ GI++ D+K  N    KNG  KL
Sbjct: 164  ITCALQFCHNAGIVHADVKPKNILMSKNGQPKL 196


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
            isoform B protein.
          Length = 931

 Score = 30.3 bits (65), Expect = 0.034
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +2

Query: 998  EIXSALGYLHSXGIIYRDLKLXN 1066
            ++   + YLHS G+++RD+KL N
Sbjct: 705  DVLEGIRYLHSQGLVHRDVKLKN 727


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
            isoform A protein.
          Length = 969

 Score = 30.3 bits (65), Expect = 0.034
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +2

Query: 998  EIXSALGYLHSXGIIYRDLKLXN 1066
            ++   + YLHS G+++RD+KL N
Sbjct: 743  DVLEGIRYLHSQGLVHRDVKLKN 765


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +3

Query: 57  CKEKPNSFALSDLHSRKCFILVLCVRTSIGENCAAARSKQTCG 185
           CK+K  +  L DL     F +V+       E C A ++   CG
Sbjct: 170 CKDKNMAPILKDLMETSYFKVVVVEDVDSVECCGALKNIVACG 212


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
            protein.
          Length = 190

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 998  EIXSALGYLHSXGIIYRDLKLXN 1066
            +I  ++ + H  G+++RDLK  N
Sbjct: 17   QILESVHHCHHNGVVHRDLKPEN 39


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 309,824
Number of Sequences: 438
Number of extensions: 6812
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 40006332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)