Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_P16
         (1195 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    26   2.5  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    26   2.5  

>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 25.8 bits (54), Expect = 2.5
 Identities = 13/53 (24%), Positives = 25/53 (47%)
 Frame = +2

Query: 296 RTEQEYSSXEDAGIDMTNDNYSETSGQSDLKSIHDEGENDSQXKLEEKVXEII 454
           R + + SS   +  D ++ + S +S +SD    +   E+DS     E+  + I
Sbjct: 444 RKQNDTSSDSSSSDDSSSSSSSSSSSESDEHDFYSSSESDSDSLSSEEFYQPI 496


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 25.8 bits (54), Expect = 2.5
 Identities = 13/53 (24%), Positives = 25/53 (47%)
 Frame = +2

Query: 296 RTEQEYSSXEDAGIDMTNDNYSETSGQSDLKSIHDEGENDSQXKLEEKVXEII 454
           R + + SS   +  D ++ + S +S +SD    +   E+DS     E+  + I
Sbjct: 444 RKQNDTSSDSSSSDDSSSSSSSSSSSESDEHDFYSSSESDSDSLSSEEFYQPI 496


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 443,090
Number of Sequences: 2352
Number of extensions: 6412
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 135295257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)