Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_P09
         (1207 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0674 - 35449373-35449465,35449959-35450112,35450763-354508...    30   3.2  
01_01_0984 + 7779251-7779329,7779354-7780054                           29   7.3  
12_01_1095 + 11436012-11436053,11436322-11436595,11470730-114707...    29   9.7  
02_03_0146 + 15720790-15721194,15721350-15721446,15721663-157219...    29   9.7  

>03_06_0674 -
           35449373-35449465,35449959-35450112,35450763-35450860,
           35450947-35451234,35451313-35451503,35451789-35452006,
           35452314-35452653,35452726-35453167
          Length = 607

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = -1

Query: 766 YNTYFCNQQTRTGSFCAFYHSAIATPIH*SFWLIISDFTNEGQVGSQANGPDVAKFDQLV 587
           Y++ F    T +GSF  FY+S  A  IH       +D++  G+        D+AK D+ V
Sbjct: 293 YSSRFSFPSTESGSFSPFYYSFDAGGIHFIMLAAYADYSKSGKQYKWLE-KDLAKVDRSV 351


>01_01_0984 + 7779251-7779329,7779354-7780054
          Length = 259

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 20/76 (26%), Positives = 37/76 (48%)
 Frame = +2

Query: 107 LAKIISFNLRTASEKGGIKMLSFGLWYFVIAAASTAADTEVVVLRAVRGRNARLPCGQGK 286
           L ++   + R  S + G+   S G W+  +  +S+A DT++  L+ +  R+AR      K
Sbjct: 44  LLRLTMSSTRRCSPRSGVTPCSGG-WWGTLCKSSSAPDTQLEKLKCLVERSAR----HLK 98

Query: 287 VFLDGPDSYVLWVKNE 334
           +F    D Y+   + E
Sbjct: 99  IFFLVVDHYISLTRGE 114


>12_01_1095 +
           11436012-11436053,11436322-11436595,11470730-11470762,
           11470770-11471494
          Length = 357

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -3

Query: 290 TLYPGRKGDEHSYHVRLEGPQLPCQRPLKQQQSRN 186
           +LYP R  D++ YH+R  GP    +  L  + +R+
Sbjct: 26  SLYPFRSEDDNRYHLRFTGPAQESRCTLLSELARS 60


>02_03_0146 +
           15720790-15721194,15721350-15721446,15721663-15721928,
           15721997-15722437
          Length = 402

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -3

Query: 347 TRRLSRSSPTKR-KNRARQGTLYPGRKGDEHSYHVRLEGPQLPCQR 213
           T++     P KR KNR R+G L   +KG +H   +++  P L C R
Sbjct: 79  TQQYRPVQPRKRSKNRRRKGGLQNSQKGFKHQLQIQIRIP-LECFR 123


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,063,978
Number of Sequences: 37544
Number of extensions: 451953
Number of successful extensions: 1282
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1280
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3689769684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)