Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_P09
(1207 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 33 0.007
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 33 0.007
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 24 2.3
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 5.4
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 7.1
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 9.4
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 32.7 bits (71), Expect = 0.007
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Frame = +2
Query: 446 LLLKHVSDEDAGTYRCRVHYQASPSVDHVVDLRLVDSPGAPKIYNENNELIKLGYVGPIS 625
LLL+HV ++ G Y C+ + VV L++ SP + + L+ +
Sbjct: 771 LLLQHVKEDREGFYLCQASNGIGSGIGKVVQLKVNSSP----YFAAPSRLV------TVK 820
Query: 626 LGANLTFVCKVADDQPKTLVYWRRNGAV-----------IKRAEAARSGLLVAEIRVVNA 772
G T C+V D P T V W + G + +KR E G ++A++++ +A
Sbjct: 821 KGDTATLHCEVHGDTPVT-VTWLKGGKIELNPSTNYRVTVKR-EVTPDG-VIAQLQISSA 877
Query: 773 XRNELDAHYECLAQN 817
++ A++ C A N
Sbjct: 878 EASDSGAYF-CQASN 891
Score = 27.1 bits (57), Expect = 0.33
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +2
Query: 446 LLLKHVSDEDAGTYRCRV-HYQASPSVDHVVDLRLVDSPGAPKIY--NENNELIKLGYVG 616
L+L ++ +D G Y C+V + Q + + + + +++ P AP +Y + + I L +
Sbjct: 1369 LMLSNLQSQDGGDYTCQVENAQGNDKLHYTLTVQV--PPSAPVLYVTSSTSSSILLHWKS 1426
Query: 617 PISLGANLT 643
+ GA+LT
Sbjct: 1427 GHNGGASLT 1435
Score = 25.0 bits (52), Expect = 1.3
Identities = 29/131 (22%), Positives = 56/131 (42%), Gaps = 3/131 (2%)
Frame = +2
Query: 440 TALLLKHVSDEDAGTYRCRVHYQASPSVDHVVDLRLVDSPGAPKIYNENNELIKLGYVGP 619
+ L L+ V+ ED G YRC ++P + ++RL+ + AP L+
Sbjct: 293 SVLALEAVTLEDNGIYRCSA---SNPGGEASAEIRLIVT--APLHVEVTPPLLS------ 341
Query: 620 ISLGANLTFVCKVADDQPKT---LVYWRRNGAVIKRAEAARSGLLVAEIRVVNAXRNELD 790
+ LG N F C+V+ P+ + W ++G + +E+ +N E
Sbjct: 342 VHLGGNAEFRCEVS-THPQAGPHFITWYKDGRQLPGTGRQ------SELLRLNGINREDR 394
Query: 791 AHYECLAQNAD 823
Y+C+ + ++
Sbjct: 395 GMYQCIVRRSE 405
Score = 23.8 bits (49), Expect = 3.1
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +2
Query: 452 LKHVSDEDAGTYRCRVHYQASPSVDHVVDLRLVDSP 559
+ HV ED G Y C +A V H L + P
Sbjct: 486 ISHVMVEDGGEYSCMAENRAG-KVTHAARLNVYGLP 520
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 32.7 bits (71), Expect = 0.007
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Frame = +2
Query: 446 LLLKHVSDEDAGTYRCRVHYQASPSVDHVVDLRLVDSPGAPKIYNENNELIKLGYVGPIS 625
LLL+HV ++ G Y C+ + VV L++ SP + + L+ +
Sbjct: 767 LLLQHVKEDREGFYLCQASNGIGSGIGKVVQLKVNSSP----YFAAPSRLV------TVK 816
Query: 626 LGANLTFVCKVADDQPKTLVYWRRNGAV-----------IKRAEAARSGLLVAEIRVVNA 772
G T C+V D P T V W + G + +KR E G ++A++++ +A
Sbjct: 817 KGDTATLHCEVHGDTPVT-VTWLKGGKIELNPSTNYRVTVKR-EVTPDG-VIAQLQISSA 873
Query: 773 XRNELDAHYECLAQN 817
++ A++ C A N
Sbjct: 874 EASDSGAYF-CQASN 887
Score = 27.1 bits (57), Expect = 0.33
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +2
Query: 446 LLLKHVSDEDAGTYRCRV-HYQASPSVDHVVDLRLVDSPGAPKIY--NENNELIKLGYVG 616
L+L ++ +D G Y C+V + Q + + + + +++ P AP +Y + + I L +
Sbjct: 1365 LMLSNLQSQDGGDYTCQVENAQGNDKLHYTLTVQV--PPSAPVLYVTSSTSSSILLHWKS 1422
Query: 617 PISLGANLT 643
+ GA+LT
Sbjct: 1423 GHNGGASLT 1431
Score = 25.0 bits (52), Expect = 1.3
Identities = 29/131 (22%), Positives = 56/131 (42%), Gaps = 3/131 (2%)
Frame = +2
Query: 440 TALLLKHVSDEDAGTYRCRVHYQASPSVDHVVDLRLVDSPGAPKIYNENNELIKLGYVGP 619
+ L L+ V+ ED G YRC ++P + ++RL+ + AP L+
Sbjct: 293 SVLALEAVTLEDNGIYRCSA---SNPGGEASAEIRLIVT--APLHVEVTPPLLS------ 341
Query: 620 ISLGANLTFVCKVADDQPKT---LVYWRRNGAVIKRAEAARSGLLVAEIRVVNAXRNELD 790
+ LG N F C+V+ P+ + W ++G + +E+ +N E
Sbjct: 342 VHLGGNAEFRCEVS-THPQAGPHFITWYKDGRQLPGTGRQ------SELLRLNGINREDR 394
Query: 791 AHYECLAQNAD 823
Y+C+ + ++
Sbjct: 395 GMYQCIVRRSE 405
Score = 23.8 bits (49), Expect = 3.1
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +2
Query: 452 LKHVSDEDAGTYRCRVHYQASPSVDHVVDLRLVDSP 559
+ HV ED G Y C +A V H L + P
Sbjct: 486 ISHVMVEDGGEYSCMAENRAG-KVTHAARLNVYGLP 520
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 24.2 bits (50), Expect = 2.3
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = -3
Query: 359 SGSDTRRLSRSSPTKRKNRARQGTLYPGRKGDEHSYHVRLEGPQLPCQRPLKQQQSR 189
+GS +R S TK +R+ ++ G + ++ PQ P Q+ +QQQ +
Sbjct: 1406 AGSRDEDSTRDS-TKLDRSSREREVHNGGQQEDRDRKTLTSAPQQPQQQQQQQQQQQ 1461
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.0 bits (47), Expect = 5.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 227 VVVLRAVRGRNARLPCGQG 283
V +L VR ARLP G+G
Sbjct: 656 VTILALVRDATARLPNGEG 674
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 22.6 bits (46), Expect = 7.1
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 440 TALLLKHVSDEDAGTYRCR 496
T L++K+V D G Y C+
Sbjct: 457 TKLIIKNVDYADTGAYMCQ 475
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.2 bits (45), Expect = 9.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 443 ALLLKHVSDEDAGTYRCRV 499
+L +K V DAG Y C V
Sbjct: 1330 SLFIKEVDRTDAGEYSCYV 1348
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,522
Number of Sequences: 438
Number of extensions: 4832
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 41211342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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