Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_P07
         (1178 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032654-2|CAA21718.1|  257|Caenorhabditis elegans Hypothetical ...   149   3e-36
AL032654-3|CAE54915.1|  101|Caenorhabditis elegans Hypothetical ...    81   1e-15
U13644-5|AAB52681.1|  451|Caenorhabditis elegans Hypothetical pr...    43   5e-04
U13644-1|AAB52683.1|  437|Caenorhabditis elegans Hypothetical pr...    43   5e-04
Z81453-6|CAH04639.1|  283|Caenorhabditis elegans Hypothetical pr...    29   4.8  
AF025454-8|AAK68370.1|  334|Caenorhabditis elegans Serpentine re...    29   4.8  
AL023847-4|CAA19550.1|  349|Caenorhabditis elegans Hypothetical ...    29   6.4  
AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical...    29   8.4  
AC006733-1|AAF60487.1|  610|Caenorhabditis elegans Hypothetical ...    29   8.4  

>AL032654-2|CAA21718.1|  257|Caenorhabditis elegans Hypothetical
           protein Y52B11A.2a protein.
          Length = 257

 Score =  149 bits (362), Expect = 3e-36
 Identities = 85/213 (39%), Positives = 125/213 (58%), Gaps = 5/213 (2%)
 Frame = +3

Query: 252 EIEALKSIYTE--ELTIDSEITRSYTIRIEENKKEVLLYVTLPEDYPSISPPKFELSAPW 425
           EIE+L SI+ +  E T D ++   +        +++ + + LPEDYPSISPP FELS P+
Sbjct: 10  EIESLASIFPDLLEETTDKQLVFKFD-------RDIGMTINLPEDYPSISPPIFELSGPY 62

Query: 426 MDRQTKTNLHKTLHEIYLDNVGETVIFQWVEMIREVLQTVCKVEKKIEVTEPEVDSLDLT 605
           + R+ K  LH +L+++Y++N+G  VIF W+ ++++ ++ + +     EV EP   + D+ 
Sbjct: 63  LRREQKEVLHNSLNDVYIENIGFPVIFNWISLVQDFIRDLPE-----EVAEPSHVADDVV 117

Query: 606 T---IEINCPEITHGEIIADRKSIFQGHAAEVHSIDDVKAVLNKLKQNRKILNATHNMYA 776
           T    EI+   I HGE++ DRKS FQ H AEV S +DV  V+  LK N KI  ATHN+ A
Sbjct: 118 TPMAEEIDDMNIRHGEVLTDRKSAFQAHLAEVRSKEDVDRVMRILKSNTKICRATHNITA 177

Query: 777 YRIXRKTAKGTNVLQDCDDDGEAHAGGXMLXLL 875
           YR   +         DC DDGE  A   ML L+
Sbjct: 178 YRYMTEINGKPIHHHDCVDDGEFGASSKMLELM 210



 Score = 31.5 bits (68), Expect = 1.2
 Identities = 14/25 (56%), Positives = 14/25 (56%)
 Frame = +2

Query: 893 NTXVVVSXWYGGXQLXXXXFRXIXN 967
           N  VVVS WYGG  L    FR I N
Sbjct: 217 NVMVVVSRWYGGIHLGPDRFRHINN 241


>AL032654-3|CAE54915.1|  101|Caenorhabditis elegans Hypothetical
           protein Y52B11A.2b protein.
          Length = 101

 Score = 81.4 bits (192), Expect = 1e-15
 Identities = 37/98 (37%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
 Frame = +3

Query: 252 EIEALKSIYTE--ELTIDSEITRSYTIRIEENKKEVLLYVTLPEDYPSISPPKFELSAPW 425
           EIE+L SI+ +  E T D ++   +        +++ + + LPEDYPSISPP FELS P+
Sbjct: 10  EIESLASIFPDLLEETTDKQLVFKFD-------RDIGMTINLPEDYPSISPPIFELSGPY 62

Query: 426 MDRQTKTNLHKTLHEIYLDNVGETVIFQWVEMIREVLQ 539
           + R+ K  LH +L+++Y++N+G  VIF W+ ++++ ++
Sbjct: 63  LRREQKEVLHNSLNDVYIENIGFPVIFNWISLVQDFIR 100


>U13644-5|AAB52681.1|  451|Caenorhabditis elegans Hypothetical
           protein F56D2.2 protein.
          Length = 451

 Score = 42.7 bits (96), Expect = 5e-04
 Identities = 20/52 (38%), Positives = 29/52 (55%)
 Frame = +3

Query: 369 LPEDYPSISPPKFELSAPWMDRQTKTNLHKTLHEIYLDNVGETVIFQWVEMI 524
           LP DYPS+S PK EL + WM+++  T+    L  I  +N    V+F   + I
Sbjct: 82  LPNDYPSVSSPKLELESYWMNQEQMTSCETELARICEENQMMEVLFMCYQTI 133


>U13644-1|AAB52683.1|  437|Caenorhabditis elegans Hypothetical
           protein F56D2.5 protein.
          Length = 437

 Score = 42.7 bits (96), Expect = 5e-04
 Identities = 19/56 (33%), Positives = 33/56 (58%)
 Frame = +3

Query: 369 LPEDYPSISPPKFELSAPWMDRQTKTNLHKTLHEIYLDNVGETVIFQWVEMIREVL 536
           LP DYP++S PK EL + WM+++  T+    L +I  +N    V+F   + I +++
Sbjct: 80  LPNDYPTVSSPKLELESYWMNQEQMTSCETELAKICEENQMMEVLFMCYQTIIDLM 135


>Z81453-6|CAH04639.1|  283|Caenorhabditis elegans Hypothetical
           protein B0250.10 protein.
          Length = 283

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
 Frame = -2

Query: 808 VPLAVFLXILYAYILCVAFRIFLFCFNLFSTAFTS-SILCTSAACPWNMLFLSAMISPCV 632
           +P  VFL I+    L   + IF FC N+  T     +  C   +C +   F +  I  C 
Sbjct: 123 LPNFVFLLIILTSELFNQYMIFGFCGNVLETPVDCLNFFCAVNSCYYRYWFSNQQI-VCF 181

Query: 631 ISGQF-ISIVVR 599
           ++G F +++V R
Sbjct: 182 LNGAFSVALVFR 193


>AF025454-8|AAK68370.1|  334|Caenorhabditis elegans Serpentine
           receptor, class i protein62 protein.
          Length = 334

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
 Frame = -2

Query: 808 VPLAVFLXILYAYILCVAFRIFLFCFNLFSTAFTSSILCTSAACPWNMLFLSAMISPCVI 629
           V  AV   I+  +ILC+         +L  +  ++S      A  W++L   A  S CV+
Sbjct: 195 VVFAVTCGIISFFILCIILANIFRMLSLLKSQISASNYRKHRAAIWSLLAQFATSSVCVV 254

Query: 628 SGQFISIVVRSKLSTSGSVTS--IFFSTLHTVCSTSLIIST 512
              F   VV   +  +  +    +  + LH+  + ++++ T
Sbjct: 255 PPIFFVFVVLIGIDGAQVIVEFLLVIACLHSSFNVTVLVFT 295


>AL023847-4|CAA19550.1|  349|Caenorhabditis elegans Hypothetical
           protein Y57A10C.8 protein.
          Length = 349

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = -2

Query: 748 IFLFCFNLFSTAFTSSILCTSAACPWNMLFLSAMISPCVISGQFISIV 605
           +F F F +FS+ +     C + AC  N +FL  +     +S  F++I+
Sbjct: 165 LFDFLFQIFSSEYQRVPNCATMACFVNKIFLKYLSYSNTLSSFFVAIM 212


>AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical
            protein Y47G6A.17 protein.
          Length = 1736

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 18/89 (20%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = +3

Query: 492  ETVIFQWVEMIREVLQTVCKVEKKIEVTEPEVDSLDLTTIE-INCPEITHGEIIADRKSI 668
            E  I ++ +++RE +    ++ +K+E+   EV+  D +T E +   E+   E+ ++ + +
Sbjct: 1161 EIAIDRYKKLLREKIDEGVQIIEKVEIVHQEVEIPDRSTEEQLRKTEVKLKELESEMRKL 1220

Query: 669  FQGHAAEVHSIDDVKAVLNKLKQNRKILN 755
                A  V + D+   V  ++++ ++ L+
Sbjct: 1221 KAKRAEIVKNDDEQDDVSERIERFKEFLD 1249


>AC006733-1|AAF60487.1|  610|Caenorhabditis elegans Hypothetical
           protein Y32H12A.2 protein.
          Length = 610

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
 Frame = +3

Query: 255 IEALKSIYTEELTIDSEITR-SYTIRIEE-NKKEVLLYVTLPEDYP------SISPPKFE 410
           I ++ +  T++++  +   R SY I   + N +++  Y+++P DYP       I+ P+  
Sbjct: 510 IASIPTSLTKKISNSAATDRFSYKIEASDGNGRKLTAYISIPADYPRHTALFGIAAPEDS 569

Query: 411 LSAPWMDRQTKTNLHKTLHEIYLDNV 488
            S+  + RQ +  L+   H  Y+D+V
Sbjct: 570 ESSTEVARQIEDRLNTEAH--YVDDV 593


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,087,206
Number of Sequences: 27780
Number of extensions: 345261
Number of successful extensions: 1161
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3224247522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)