Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_P06
(1157 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical pr... 326 2e-89
D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1 pr... 321 7e-88
U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical p... 293 2e-79
D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2 pr... 293 2e-79
U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical p... 291 6e-79
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 32 0.67
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 32 0.67
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 29 6.2
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 29 8.2
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 29 8.2
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 29 8.2
AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical ... 29 8.2
>Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical
protein T05D4.1 protein.
Length = 365
Score = 326 bits (801), Expect = 2e-89
Identities = 157/239 (65%), Positives = 186/239 (77%)
Frame = +3
Query: 183 MSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYR 362
M++Y Q+ T ++EL+ IA AIV P KGILAADESTG+M KRL IG+ENTEENRR+YR
Sbjct: 1 MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYR 60
Query: 363 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 542
QLLF++ A L++ ISGVI+FHET YQK DDG P +LL+++GIIPGIKVDKGVVP+ G+
Sbjct: 61 QLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTI 120
Query: 543 DECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQS 722
E TTQGLDDL RCAQYKKDG FAKWRCV KI TPS A++E A+ LARYASICQ
Sbjct: 121 GEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIASNLARYASICQQ 180
Query: 723 QRIVPIVEPEVLPDGEHDLXRAXKVTXVVLAXVYKALNDHXVYLEGTLLXPXMVXXGXS 899
+VPIVEPE+LPDGEH L R K+T VL+ VY ALN+H V+LEGTLL P MV G S
Sbjct: 181 NGLVPIVEPEILPDGEHCLARGQKITETVLSYVYHALNEHHVFLEGTLLKPNMVTSGQS 239
>D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1
protein.
Length = 366
Score = 321 bits (788), Expect = 7e-88
Identities = 156/240 (65%), Positives = 186/240 (77%), Gaps = 1/240 (0%)
Frame = +3
Query: 183 MSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYR 362
M++Y Q+ T ++EL+ IA AIV P KGILAADESTG+M KRL IG+ENTEENRR+YR
Sbjct: 1 MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYR 60
Query: 363 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 542
QLLF++ A L++ ISGVI+FHET YQK DDG P +LL+++GIIPGIKVDKGVVP+ G+
Sbjct: 61 QLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTI 120
Query: 543 DECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENA-NVLARYASICQ 719
E TTQGLDDL RCAQYKKDG FAKWRCV KI TPS A++E A N+ +RYASICQ
Sbjct: 121 GEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIASNLGSRYASICQ 180
Query: 720 SQRIVPIVEPEVLPDGEHDLXRAXKVTXVVLAXVYKALNDHXVYLEGTLLXPXMVXXGXS 899
+VPIVEPE+LPDGEH L R K+T VL+ VY ALN+H V+LEGTLL P MV G S
Sbjct: 181 QNGLVPIVEPEILPDGEHCLARGQKITETVLSYVYHALNEHHVFLEGTLLKPNMVTSGQS 240
>U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical
protein F01F1.12a protein.
Length = 366
Score = 293 bits (718), Expect = 2e-79
Identities = 152/247 (61%), Positives = 177/247 (71%)
Frame = +3
Query: 207 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 386
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 387 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 566
L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGL
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 567 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVE 746
D LA+R A +KK GC FAKWRCVL IG +TPS+ + ENANVLARYASICQ+ +VPIVE
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENANVLARYASICQANGLVPIVE 191
Query: 747 PEVLPDGEHDLXRAXKVTXVVLAXVYKALNDHXVYLEGTLLXPXMVXXGXSCXXXXXPXX 926
PEVL DGEHDL RA KVT VLA VYKAL DH VYLEGTLL P MV G S
Sbjct: 192 PEVLCDGEHDLARAQKVTEQVLAFVYKALADHHVYLEGTLLKPNMVTPGQSSASKASHEA 251
Query: 927 XXRATVT 947
ATVT
Sbjct: 252 IGLATVT 258
>D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2
protein.
Length = 366
Score = 293 bits (718), Expect = 2e-79
Identities = 152/247 (61%), Positives = 177/247 (71%)
Frame = +3
Query: 207 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 386
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 387 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 566
L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGL
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 567 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVE 746
D LA+R A +KK GC FAKWRCVL IG +TPS+ + ENANVLARYASICQ+ +VPIVE
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENANVLARYASICQANGLVPIVE 191
Query: 747 PEVLPDGEHDLXRAXKVTXVVLAXVYKALNDHXVYLEGTLLXPXMVXXGXSCXXXXXPXX 926
PEVL DGEHDL RA KVT VLA VYKAL DH VYLEGTLL P MV G S
Sbjct: 192 PEVLCDGEHDLARAQKVTEQVLAFVYKALADHHVYLEGTLLKPNMVTPGQSSASKASHEA 251
Query: 927 XXRATVT 947
ATVT
Sbjct: 252 IGLATVT 258
>U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical
protein F01F1.12b protein.
Length = 259
Score = 291 bits (714), Expect = 6e-79
Identities = 148/231 (64%), Positives = 173/231 (74%)
Frame = +3
Query: 207 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 386
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 387 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 566
L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGL
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 567 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVE 746
D LA+R A +KK GC FAKWRCVL IG +TPS+ + ENANVLARYASICQ+ +VPIVE
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENANVLARYASICQANGLVPIVE 191
Query: 747 PEVLPDGEHDLXRAXKVTXVVLAXVYKALNDHXVYLEGTLLXPXMVXXGXS 899
PEVL DGEHDL RA KVT VLA VYKAL DH VYLEGTLL P MV G S
Sbjct: 192 PEVLCDGEHDLARAQKVTEQVLAFVYKALADHHVYLEGTLLKPNMVTPGQS 242
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 32.3 bits (70), Expect = 0.67
Identities = 37/151 (24%), Positives = 60/151 (39%)
Frame = +2
Query: 326 RGEHRGEPSSLSPTAIQL*RCALREHLWCDPVPRDPLPEG*RWNPSGLPAGEEGHHPRHQ 505
+G R + ++ PTA Q+ + + + VPR P P +PS + G HP Q
Sbjct: 140 QGASREQGNAHQPTAGQIPQSSNQPAQQTHNVPRMPQPLQQVPHPSPV----RGSHPAAQ 195
Query: 506 GRQGCRPAVRIGRRMHHPGSGRPRPALRPVQEGRLPLRQVALRAEDWPQHPLVPSYPGKR 685
Q RI + + P P ++ V+ + Q+ +A P + P R
Sbjct: 196 QVQNAPQ--RIPQHVPMPQGVAPHQVIQQVRAPNIGASQMVQQA---PSRGHTGAAPASR 250
Query: 686 QCSRPLRLHLSEPTHRANCRARSLT*WRARP 778
+P+ LH H+A + T R RP
Sbjct: 251 MAQQPVPLHQGVAPHQAAPQTIQQTPARGRP 281
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 32.3 bits (70), Expect = 0.67
Identities = 37/151 (24%), Positives = 60/151 (39%)
Frame = +2
Query: 326 RGEHRGEPSSLSPTAIQL*RCALREHLWCDPVPRDPLPEG*RWNPSGLPAGEEGHHPRHQ 505
+G R + ++ PTA Q+ + + + VPR P P +PS + G HP Q
Sbjct: 140 QGASREQGNAHQPTAGQIPQSSNQPAQQTHNVPRMPQPLQQVPHPSPV----RGSHPAAQ 195
Query: 506 GRQGCRPAVRIGRRMHHPGSGRPRPALRPVQEGRLPLRQVALRAEDWPQHPLVPSYPGKR 685
Q RI + + P P ++ V+ + Q+ +A P + P R
Sbjct: 196 QVQNAPQ--RIPQHVPMPQGVAPHQVIQQVRAPNIGASQMVQQA---PSRGHTGAAPASR 250
Query: 686 QCSRPLRLHLSEPTHRANCRARSLT*WRARP 778
+P+ LH H+A + T R RP
Sbjct: 251 MAQQPVPLHQGVAPHQAAPQTIQQTPARGRP 281
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 29.1 bits (62), Expect = 6.2
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +2
Query: 443 G*RWNPSGLPAGEEGHH--PRHQGRQGCRPAVRIGRRMHHPGSGRPRP 580
G R P P G GHH P H G P+ R G HH RP P
Sbjct: 382 GGRHGPPHCP-GRHGHHGPPHHHHHDGRSPS-RHGHHHHHHHGCRPFP 427
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 28.7 bits (61), Expect = 8.2
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +3
Query: 213 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 356
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 747 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 806
Query: 357 YRQLLFSSDA 386
Y QL+ SD+
Sbjct: 807 YEQLVSESDS 816
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 28.7 bits (61), Expect = 8.2
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +3
Query: 213 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 356
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 733 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 792
Query: 357 YRQLLFSSDA 386
Y QL+ SD+
Sbjct: 793 YEQLVSESDS 802
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 28.7 bits (61), Expect = 8.2
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +3
Query: 213 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 356
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 733 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 792
Query: 357 YRQLLFSSDA 386
Y QL+ SD+
Sbjct: 793 YEQLVSESDS 802
>AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical
protein C02B10.5 protein.
Length = 698
Score = 28.7 bits (61), Expect = 8.2
Identities = 24/85 (28%), Positives = 32/85 (37%), Gaps = 3/85 (3%)
Frame = +2
Query: 419 VPRDPLPEG*RWNPSGLPAGEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRPALRP-- 592
+P +P G P G+ G G P H G QG P + M G P+P P
Sbjct: 587 MPPGMMPPG--MMPPGMHPGMAGMPPMHPGMQGMPPMHPGMQGMPGMPHGPPQPPQNPAL 644
Query: 593 -VQEGRLPLRQVALRAEDWPQHPLV 664
V R + A P HP++
Sbjct: 645 MVAGNRAGSAEAAAAQMGNPHHPMM 669
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,982,839
Number of Sequences: 27780
Number of extensions: 471374
Number of successful extensions: 1561
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1557
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3151206316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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