Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_P05
(1223 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 222 2e-56
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 95 3e-18
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 93 1e-17
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 79 2e-13
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 77 9e-13
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 76 2e-12
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 66 1e-09
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 62 2e-08
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 59 2e-07
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 1e-06
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 56 2e-06
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 54 6e-06
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 49 3e-04
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 43 0.019
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.075
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.13
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 8.6
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 222 bits (542), Expect = 2e-56
Identities = 103/117 (88%), Positives = 104/117 (88%)
Frame = +2
Query: 479 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 658
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 659 CRLPDTCPXFSLREAWRFLIAHAVGISVRCXSFAPSWAVCTNPPFXPTXXPYPVTIV 829
CRLPDTCP FSLREAWRFLIAHAVGISVRC SFAPSWAVCTNPPF PT PYPVTIV
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIV 118
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 95.1 bits (226), Expect = 3e-18
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +2
Query: 497 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 658
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 93.5 bits (222), Expect = 1e-17
Identities = 45/56 (80%), Positives = 46/56 (82%)
Frame = +2
Query: 503 RPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 670
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P LP
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
Score = 39.5 bits (88), Expect = 0.17
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +1
Query: 310 RGEAVCVLGALPLPRSLTRCARSFGC 387
R +C G +PLPRSLTR ARSFGC
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGC 51
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 79.0 bits (186), Expect = 2e-13
Identities = 45/103 (43%), Positives = 49/103 (47%)
Frame = +2
Query: 572 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPXFSLREAWRFLIAHAVGISVRCX 751
VR GETRQD K P P P FSL + + GIS RC
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 752 SFAPSWAVCTNPPFXPTXXPYPVTIV*VQPGKTXXIATGXXHW 880
SFAPSWAV NPPF PT PYPVT+ K+ ATG HW
Sbjct: 83 SFAPSWAVSKNPPFSPTAAPYPVTVHLSPTRKSTQNATGSSHW 125
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 77.0 bits (181), Expect = 9e-13
Identities = 40/74 (54%), Positives = 47/74 (63%)
Frame = -2
Query: 841 GLDSDDSYRIRXXGRXERGVRAHSPAWSERXTPN*DTYSVSYEKAPRFPKGEXRTGIR*A 662
G DDSYR R ERGVRA+SPAWSER P+ DT SVSYEKAPRFPKG+ +
Sbjct: 9 GWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQV--- 65
Query: 661 AGSEQESARGSFQG 620
+G Q R + +G
Sbjct: 66 SGKRQGRNRRAHEG 79
Score = 48.4 bits (110), Expect = 4e-04
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = -3
Query: 690 EKXGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 571
+K QVSGKRQGRNRRAHEGA+ K SL PPLT
Sbjct: 60 KKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 75.8 bits (178), Expect = 2e-12
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +1
Query: 637 VRSPVPTLPLTGYLSXFLPSGSVALSHSSRCRYLSSV 747
+RSPVPTLPLTGYLS FLPSGSVALSHSSRCRYLSSV
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein -
Escherichia coli
Length = 84
Score = 66.5 bits (155), Expect = 1e-09
Identities = 32/61 (52%), Positives = 34/61 (55%)
Frame = +3
Query: 831 ESNPVRHXLSPLAXXTGNRIXXXRYVXGXTXX*XWWPXXGXXKXXXFGXXXLXKXXTXXK 1010
ESNPVRH LSPLA TGNRI RYV G T WWP G + FG L K T K
Sbjct: 20 ESNPVRHDLSPLAAATGNRISRARYVGGATEFLKWWPNYGYTRRTVFGICALLKPVTFGK 79
Query: 1011 K 1013
+
Sbjct: 80 R 80
Score = 37.1 bits (82), Expect = 0.93
Identities = 18/27 (66%), Positives = 20/27 (74%), Gaps = 2/27 (7%)
Frame = +1
Query: 775 VHEPPVXXDRXALSGNYRL--SPTR*D 849
+HEPPV DR ALSGNYRL +P R D
Sbjct: 1 MHEPPVQPDRCALSGNYRLESNPVRHD 27
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 62.5 bits (145), Expect = 2e-08
Identities = 28/36 (77%), Positives = 28/36 (77%)
Frame = -2
Query: 847 LTGLDSDDSYRIRXXGRXERGVRAHSPAWSERXTPN 740
L G DDSYRIR GR ERGVRAHSPAWSER TPN
Sbjct: 7 LPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTPN 42
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 59.3 bits (137), Expect = 2e-07
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = +2
Query: 389 CERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKI 562
C R Q R G +P+N I +R + + + P T F S PLT+ITKI
Sbjct: 23 CHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKI 82
Query: 563 DAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 658
Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 83 YPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 56.4 bits (130), Expect = 1e-06
Identities = 29/42 (69%), Positives = 30/42 (71%)
Frame = +1
Query: 286 CINESANARGEAVCVLGALPLPRSLTRCARSFGCLRAVSAHS 411
CI + A AR EAV VL ALPL RS TRC RS GC AVSAHS
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHS 307
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 56.0 bits (129), Expect = 2e-06
Identities = 26/33 (78%), Positives = 26/33 (78%)
Frame = -2
Query: 487 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLA 389
P LLTCSF YPLILWITVLPPLSEL PLA
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLA 51
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 54.4 bits (125), Expect = 6e-06
Identities = 31/38 (81%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Frame = +1
Query: 355 SLTRCARSFGCLR-AVSAHSKAVIRLSTESGDNAGKNM 465
SLT RS LR AVSAHSKAVIRLSTESGDNAGKNM
Sbjct: 22 SLTDSLRSVVRLRRAVSAHSKAVIRLSTESGDNAGKNM 59
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 48.8 bits (111), Expect = 3e-04
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = -2
Query: 826 DSYRIRXXGRXERGVRAHSPAWSERXTPN*DT 731
+SYRIR R ERGV A+SPAWSER TP+ DT
Sbjct: 14 NSYRIRRSSRAERGVLAYSPAWSERPTPSRDT 45
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 42.7 bits (96), Expect = 0.019
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2
Query: 92 PDMIRYIDEFGQTTTRMQ 145
PDMIRYIDEFGQTTTRMQ
Sbjct: 347 PDMIRYIDEFGQTTTRMQ 364
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.075
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 284 SALMNRPTRGERRFAYW 334
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.13
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 356 ERGSGRAPNTQTASPRALADSLMQ 285
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 8.6
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 167 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 334
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 884,234,635
Number of Sequences: 1657284
Number of extensions: 16957556
Number of successful extensions: 44103
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 42035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44079
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 124011183115
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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