Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_P05
         (1223 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0218 + 18219956-18220555                                         33   0.46 
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    31   2.4  
06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    31   2.4  
07_03_1769 + 29377784-29377878,29377993-29378180,29378340-293784...    30   4.3  
03_06_0149 - 31987183-31987630,31987813-31987874                       29   9.8  

>06_03_0218 + 18219956-18220555
          Length = 199

 Score = 33.1 bits (72), Expect = 0.46
 Identities = 22/63 (34%), Positives = 27/63 (42%)
 Frame = -3

Query: 792 NGGFVHTAQLGANDXHRTEIPTA*AMRKRHASRREKXGQVSGKRQGRNRRAHEGASRGKR 613
           NGG     ++ A    +T  P     R R   R E  G  + KR+GR R    G  RGKR
Sbjct: 81  NGGLTEGEEVAARPREKTARPDG--ARARRERRLEAAG--AEKREGRRRGGSSGGLRGKR 136

Query: 612 LVS 604
             S
Sbjct: 137 RAS 139


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
 Frame = +1

Query: 292 NESAN---ARGEAVCVLGALPLPRSLTRCARSFGCLRAVSAHSKAVIRLSTES 441
           +ESAN   AR EAV  +G +P+   L RC+R      A S  +KA+  LS  +
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSRE----SAQSEAAKAIANLSVNA 482


>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +2

Query: 512 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 670
           CWR  +        T  D Q    +    +KD    P + PSC L+F P   P
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQP 335


>07_03_1769 +
           29377784-29377878,29377993-29378180,29378340-29378472,
           29378580-29378715,29378996-29379072,29379162-29380830,
           29380935-29381018,29381120-29381224,29381302-29381358
          Length = 847

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -2

Query: 178 ITNFTNKAFFSLHSSCGLSKLINVSYHVWKQ 86
           +  +TN +FF+ HS+C  +KLI+   H+ KQ
Sbjct: 149 LKRYTNPSFFTSHSACS-TKLIHQRIHMAKQ 178


>03_06_0149 - 31987183-31987630,31987813-31987874
          Length = 169

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 720 AMRKRHASRREKXGQVSGKRQGRNRRAHEGASRG 619
           A+ + H   R +   +  +R+GR R AHEG   G
Sbjct: 76  AVARGHGLERLQEAGIEAERRGRRRNAHEGIKIG 109


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,690,202
Number of Sequences: 37544
Number of extensions: 505731
Number of successful extensions: 1377
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1377
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3759607596
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)