Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_P02
(1128 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 194 3e-48
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 123 1e-26
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 95 3e-18
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 62 2e-08
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 62 3e-08
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 62 3e-08
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 57 1e-06
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 54 5e-06
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 54 9e-06
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 51 6e-05
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 46 0.001
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 45 0.004
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 41 0.051
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.067
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 40 0.12
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.12
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 7.7
UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase... 34 7.7
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 194 bits (474), Expect = 3e-48
Identities = 93/122 (76%), Positives = 94/122 (77%)
Frame = +3
Query: 474 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLXAPSCALLFRP 653
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL APSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 654 XRLPDTCPXFSLREAWXFLIXHAVXISXRCXSFXPXWXVCTNPPFXPXXXPYXVXXVLSX 833
RLPDTCP FSLREAW FLI HAV IS RC SF P W VCTNPPF P PY V VLS
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSP 121
Query: 834 XR 839
R
Sbjct: 122 TR 123
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 123 bits (296), Expect = 1e-26
Identities = 72/120 (60%), Positives = 77/120 (64%)
Frame = +3
Query: 306 RGEAVCVLGALPLPRSLTRCARSFGCCERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 485
R +C G +PLPRSLTR ARSFGC ERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 486 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLXAPSCALLFRPXRLP 665
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P LP
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 95.1 bits (226), Expect = 3e-18
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +3
Query: 492 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLXAPSCALLFRP 653
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 62.5 bits (145), Expect = 2e-08
Identities = 29/38 (76%), Positives = 29/38 (76%)
Frame = -2
Query: 482 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLATXERP 369
P LLTCSF YPLILWITVLPPLSEL PLA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 62.1 bits (144), Expect = 3e-08
Identities = 30/53 (56%), Positives = 32/53 (60%)
Frame = -2
Query: 839 PXXTQXXXYRIRXXXRXERGVXAHXPXWXERXTPX*DTYSVXYEKAPRFPKGE 681
P TQ YR R ERGV A+ P W ER P DT SV YEKAPRFPKG+
Sbjct: 8 PGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGK 60
Score = 45.2 bits (102), Expect = 0.003
Identities = 24/40 (60%), Positives = 25/40 (62%)
Frame = -3
Query: 685 EKXGQVSGXRQGRNRRAHEGAXRGKRLVSL*SCRVSPPLT 566
+K QVSG RQGRNRRAHEGA K SL PPLT
Sbjct: 60 KKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 61.7 bits (143), Expect = 3e-08
Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +3
Query: 381 CCERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 554
CC R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 555 IDAQVRGGETRQDYKDTRRFPLXAPSCALLFRP 653
I Q + +T+ +YK T FPL +PS +LLF P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 56.8 bits (131), Expect = 1e-06
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = +2
Query: 371 VVRXLRAVSAHSKAVIRLSTESGDNAGKNM 460
VVR RAVSAHSKAVIRLSTESGDNAGKNM
Sbjct: 30 VVRLRRAVSAHSKAVIRLSTESGDNAGKNM 59
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 54.4 bits (125), Expect = 5e-06
Identities = 31/57 (54%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +3
Query: 282 CINESANARGEAVCVLGALPLPRSLTRCARSFGCCERYQL-TQRR*YGYPQNQGITQ 449
CI + A AR EAV VL ALPL RS TRC RS GC + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 53.6 bits (123), Expect = 9e-06
Identities = 35/91 (38%), Positives = 36/91 (39%)
Frame = +3
Query: 567 VRGGETRQDYKDTRRFPLXAPSCALLFRPXRLPDTCPXFSLREAWXFLIXHAVXISXRCX 746
VR GETRQD K P P P FSL + IS RC
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 747 SFXPXWXVCTNPPFXPXXXPYXVXXVLSXXR 839
SF P W V NPPF P PY V LS R
Sbjct: 83 SFAPSWAVSKNPPFSPTAAPYPVTVHLSPTR 113
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 50.8 bits (116), Expect = 6e-05
Identities = 24/31 (77%), Positives = 24/31 (77%)
Frame = +2
Query: 650 TLXXTGYLSXFLPSGSVXLSHXSRCXYLXSV 742
TL TGYLS FLPSGSV LSH SRC YL SV
Sbjct: 7 TLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 46.4 bits (105), Expect = 0.001
Identities = 21/35 (60%), Positives = 21/35 (60%)
Frame = -2
Query: 842 LPXXTQXXXYRIRXXXRXERGVXAHXPXWXERXTP 738
LP TQ YRIR R ERGV AH P W ER TP
Sbjct: 7 LPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTP 41
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 44.8 bits (101), Expect = 0.004
Identities = 21/38 (55%), Positives = 22/38 (57%)
Frame = -2
Query: 839 PXXTQXXXYRIRXXXRXERGVXAHXPXWXERXTPX*DT 726
P TQ YRIR R ERGV A+ P W ER TP DT
Sbjct: 8 PGWTQVNSYRIRRSSRAERGVLAYSPAWSERPTPSRDT 45
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 41.1 bits (92), Expect = 0.051
Identities = 21/55 (38%), Positives = 22/55 (40%)
Frame = +2
Query: 770 VHXPPVXXXRXXLXGXYXXESXPVRXXLXXXXXXXGXXIXXXXYVXXXXXXLXWW 934
+H PPV R L G Y ES PVR L G I YV L WW
Sbjct: 1 MHEPPVQPDRCALSGNYRLESNPVRHDLSPLAAATGNRISRARYVGGATEFLKWW 55
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.067
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 280 SALMNRPTRGERRFAYW 330
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 39.9 bits (89), Expect = 0.12
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 91 DMIRYIDEFGQTTTRMQ 141
DMIRYIDEFGQTTTRMQ
Sbjct: 348 DMIRYIDEFGQTTTRMQ 364
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.12
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 352 ERGSGRAPNTQTASPRALADSLMQ 281
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 7.7
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 163 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 330
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase
kinase 10; n=21; Euteleostomi|Rep: Mitogen-activated
protein kinase kinase kinase 10 - Homo sapiens (Human)
Length = 954
Score = 33.9 bits (74), Expect = 7.7
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = -2
Query: 653 GSEQESARGSXQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWP 480
GS+Q S+ G++P + GFA+ + +F +A GG + +P + P Y S P
Sbjct: 582 GSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPSYLSVP 639
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,796,698
Number of Sequences: 1657284
Number of extensions: 11216238
Number of successful extensions: 27653
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 26804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27647
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 111000173739
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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