Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_O22
(1163 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC005943-1|AAH05943.1| 221|Homo sapiens recombination activatin... 53 2e-06
AL691442-8|CAI15323.1| 221|Homo sapiens recombination activatin... 53 2e-06
AF126023-1|AAF17232.1| 221|Homo sapiens stromal cell protein pr... 53 2e-06
CR457148-1|CAG33429.1| 221|Homo sapiens LOC55974 protein. 50 1e-05
BC009621-1|AAH09621.1| 167|Homo sapiens RAG1AP1 protein protein. 44 0.001
AL691442-7|CAI15322.1| 167|Homo sapiens recombination activatin... 44 0.001
BC036522-1|AAH36522.1| 780|Homo sapiens cation channel, sperm a... 34 1.1
BC032950-1|AAH32950.1| 780|Homo sapiens cation channel, sperm a... 34 1.1
AF407333-1|AAL14105.1| 780|Homo sapiens sperm ion channel protein. 34 1.1
>BC005943-1|AAH05943.1| 221|Homo sapiens recombination activating
gene 1 activating protein 1 protein.
Length = 221
Score = 52.8 bits (121), Expect = 2e-06
Identities = 43/176 (24%), Positives = 68/176 (38%), Gaps = 4/176 (2%)
Frame = +1
Query: 232 IVGSIAAFVTIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTM 411
I G+ F T+G +G + S + +PFL V + L YG + D +
Sbjct: 11 IYGACVVF-TLGMFSAGLSDLRHMRMTRSVDNVQFLPFLTTEVNNLGWLSYGALKGDGIL 69
Query: 412 IQVNMFGLALNIIYVMIYFNYSQQKVKVWAQIGLAGAVSAALIGYAQ----TEDPKLVET 579
I VN G AL +Y++ Y +Y +K V Q A + L+GY +P+
Sbjct: 70 IVVNTVGAALQTLYILAYLHYCPRKRVVLLQ--TATLLGVLLLGYGYFWLLVPNPEARLQ 127
Query: 580 XFGTIITAFMXYLIAXPXXGLKXIIXNXSTXXMPXPIILXGTXXTXXWXXXGXXXR 747
G + F + P L +I ST + P+ + + W G R
Sbjct: 128 QLGLFCSVFTISMYLSPLADLAKVIQTKSTQCLSYPLTIATLLTSASWCLYGFRLR 183
>AL691442-8|CAI15323.1| 221|Homo sapiens recombination activating
gene 1 activating protein 1 protein.
Length = 221
Score = 52.8 bits (121), Expect = 2e-06
Identities = 43/176 (24%), Positives = 68/176 (38%), Gaps = 4/176 (2%)
Frame = +1
Query: 232 IVGSIAAFVTIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTM 411
I G+ F T+G +G + S + +PFL V + L YG + D +
Sbjct: 11 IYGACVVF-TLGMFSAGLSDLRHMRMTRSVDNVQFLPFLTTEVNNLGWLSYGALKGDGIL 69
Query: 412 IQVNMFGLALNIIYVMIYFNYSQQKVKVWAQIGLAGAVSAALIGYAQ----TEDPKLVET 579
I VN G AL +Y++ Y +Y +K V Q A + L+GY +P+
Sbjct: 70 IVVNTVGAALQTLYILAYLHYCPRKRVVLLQ--TATLLGVLLLGYGYFWLLVPNPEARLQ 127
Query: 580 XFGTIITAFMXYLIAXPXXGLKXIIXNXSTXXMPXPIILXGTXXTXXWXXXGXXXR 747
G + F + P L +I ST + P+ + + W G R
Sbjct: 128 QLGLFCSVFTISMYLSPLADLAKVIQTKSTQCLSYPLTIATLLTSASWCLYGFRLR 183
>AF126023-1|AAF17232.1| 221|Homo sapiens stromal cell protein
protein.
Length = 221
Score = 52.8 bits (121), Expect = 2e-06
Identities = 43/176 (24%), Positives = 68/176 (38%), Gaps = 4/176 (2%)
Frame = +1
Query: 232 IVGSIAAFVTIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTM 411
I G+ F T+G +G + S + +PFL V + L YG + D +
Sbjct: 11 IYGACVVF-TLGMFSAGLSDLRHMRMTRSVDNVRFLPFLTTEVNNLGWLSYGALKGDGIL 69
Query: 412 IQVNMFGLALNIIYVMIYFNYSQQKVKVWAQIGLAGAVSAALIGYAQ----TEDPKLVET 579
I VN G AL +Y++ Y +Y +K V Q A + L+GY +P+
Sbjct: 70 IVVNTVGAALQTLYILAYLHYCPRKRVVLLQ--TATLLGVLLLGYGYFWLLVPNPEARLQ 127
Query: 580 XFGTIITAFMXYLIAXPXXGLKXIIXNXSTXXMPXPIILXGTXXTXXWXXXGXXXR 747
G + F + P L +I ST + P+ + + W G R
Sbjct: 128 QLGLFCSVFTISMYLSPLADLAKVIQTKSTQCLSYPLTIATLLTSASWCLYGFRLR 183
>CR457148-1|CAG33429.1| 221|Homo sapiens LOC55974 protein.
Length = 221
Score = 50.4 bits (115), Expect = 1e-05
Identities = 42/176 (23%), Positives = 67/176 (38%), Gaps = 4/176 (2%)
Frame = +1
Query: 232 IVGSIAAFVTIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTM 411
I G+ F T+G +G + S + +PFL V + L YG + D +
Sbjct: 11 IYGACVVF-TLGMFSAGLSDLRHMRMTRSVDNVQFLPFLTTEVNNLGWLSYGALKGDGIL 69
Query: 412 IQVNMFGLALNIIYVMIYFNYSQQKVKVWAQIGLAGAVSAALIGYAQ----TEDPKLVET 579
I VN G AL +Y++ Y +Y +K V Q A + L+GY +P+
Sbjct: 70 IVVNTVGAALQTLYILAYLHYCPRKRVVLLQ--TATLLGVLLLGYGYFWLLVPNPEARLQ 127
Query: 580 XFGTIITAFMXYLIAXPXXGLKXIIXNXSTXXMPXPIILXGTXXTXXWXXXGXXXR 747
+ F + P L +I ST + P+ + + W G R
Sbjct: 128 QLALFCSVFTISMYLSPLADLAKVIQTKSTQCLSYPLTIATLLTSASWCLYGFRLR 183
>BC009621-1|AAH09621.1| 167|Homo sapiens RAG1AP1 protein protein.
Length = 167
Score = 44.0 bits (99), Expect = 0.001
Identities = 27/88 (30%), Positives = 41/88 (46%)
Frame = +1
Query: 232 IVGSIAAFVTIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTM 411
I G+ F T+G +G + S + +PFL V + L YG + D +
Sbjct: 11 IYGACVVF-TLGMFSAGLSDLRHMRMTRSVDNVQFLPFLTTEVNNLGWLSYGALKGDGIL 69
Query: 412 IQVNMFGLALNIIYVMIYFNYSQQKVKV 495
I VN G AL +Y++ Y +Y +K KV
Sbjct: 70 IVVNTVGAALQTLYILAYLHYCPRKAKV 97
>AL691442-7|CAI15322.1| 167|Homo sapiens recombination activating
gene 1 activating protein 1 protein.
Length = 167
Score = 44.0 bits (99), Expect = 0.001
Identities = 27/88 (30%), Positives = 41/88 (46%)
Frame = +1
Query: 232 IVGSIAAFVTIGQMFSGSFICWDIYKQGSTRGIGIMPFLGGVVMTILNLQYGYILRDDTM 411
I G+ F T+G +G + S + +PFL V + L YG + D +
Sbjct: 11 IYGACVVF-TLGMFSAGLSDLRHMRMTRSVDNVQFLPFLTTEVNNLGWLSYGALKGDGIL 69
Query: 412 IQVNMFGLALNIIYVMIYFNYSQQKVKV 495
I VN G AL +Y++ Y +Y +K KV
Sbjct: 70 IVVNTVGAALQTLYILAYLHYCPRKAKV 97
>BC036522-1|AAH36522.1| 780|Homo sapiens cation channel, sperm
associated 1 protein.
Length = 780
Score = 33.9 bits (74), Expect = 1.1
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 300 HIQAGQHSRDRHHAVPRRCCYDHPELAIWLHTP*RHHDSSQHVRS 434
H+ QH +HH VP R H + + H RHH++ QH +S
Sbjct: 198 HLSGLQHDESQHHQVPHRGWPHHHQ--VHHHGRSRHHEAHQHGKS 240
>BC032950-1|AAH32950.1| 780|Homo sapiens cation channel, sperm
associated 1 protein.
Length = 780
Score = 33.9 bits (74), Expect = 1.1
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 300 HIQAGQHSRDRHHAVPRRCCYDHPELAIWLHTP*RHHDSSQHVRS 434
H+ QH +HH VP R H + + H RHH++ QH +S
Sbjct: 198 HLSGLQHDESQHHQVPHRGWPHHHQ--VHHHGRSRHHEAHQHGKS 240
>AF407333-1|AAL14105.1| 780|Homo sapiens sperm ion channel protein.
Length = 780
Score = 33.9 bits (74), Expect = 1.1
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 300 HIQAGQHSRDRHHAVPRRCCYDHPELAIWLHTP*RHHDSSQHVRS 434
H+ QH +HH VP R H + + H RHH++ QH +S
Sbjct: 198 HLSGLQHDESQHHQVPHRGWPHHHQ--VHHHGRSRHHEAHQHGKS 240
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,860,708
Number of Sequences: 237096
Number of extensions: 1823990
Number of successful extensions: 3812
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3808
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16238637850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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