Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_O21
(1162 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1457 + 37508187-37508421,37509012-37509109,37509791-375099... 144 1e-34
01_07_0284 - 42472309-42472359,42472778-42472864,42473384-424734... 115 6e-26
03_06_0257 - 32697469-32697520,32698183-32698301,32698536-326985... 50 4e-06
03_06_0347 + 33293915-33294104,33295143-33295284,33295365-332954... 48 1e-05
03_01_0459 + 3533718-3533916,3535009-3535150,3535290-3535410,353... 47 2e-05
06_01_0521 - 3773749-3773931,3774295-3774485,3775115-3775334 45 1e-04
07_01_0680 + 5128023-5128212,5128629-5128667,5129496-5129637,512... 43 5e-04
01_01_0945 - 7439776-7440026,7440109-7440269,7440824-7441011 41 0.002
12_01_0405 - 3207977-3208018,3208097-3208215,3208303-3208429,320... 33 0.43
08_02_0127 + 12840738-12840913,12841475-12841635,12842123-128422... 33 0.43
04_01_0415 - 5491968-5492069,5492173-5492271,5492900-5492989,549... 33 0.57
12_02_1187 - 26793455-26793496,26793599-26793717,26793813-267939... 31 1.3
03_01_0346 - 2721667-2721768,2721853-2721951,2722868-2722957,272... 31 1.3
02_05_1125 + 34282559-34282796,34283247-34283437,34283540-342836... 29 5.3
02_01_0717 + 5351504-5351602,5353401-5353499,5353574-5353675,535... 29 9.3
>01_06_1457 +
37508187-37508421,37509012-37509109,37509791-37509904,
37510361-37510426,37510659-37510745,37510902-37511012
Length = 236
Score = 144 bits (349), Expect = 1e-34
Identities = 79/170 (46%), Positives = 106/170 (62%), Gaps = 3/170 (1%)
Frame = +1
Query: 325 ASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSVKEGEYMLQVYVRADNL 504
A +L A D+ F +FQR + +EF+ FV++T+ +RT P RQSV+ EY + + R + L
Sbjct: 32 AVVLANATDVSHFGFFQRGAAREFIVFVARTVAQRTQPGQRQSVQHEEYKVHSHNR-NGL 90
Query: 505 AGVLISDHEYPNRVAHTLITKTLDEFTAAVPSSTWATGKESTI---DFPSLALHLEKYQN 675
V D YP R A +L+ K LDE+ A S A K++T +P L L K+Q+
Sbjct: 91 CAVAFMDDHYPVRSAFSLLNKVLDEYQKAFGDSWKAATKDATDAAQQWPFLTDALTKFQD 150
Query: 676 PKEADALTKIQNDLDETKIILHDTIKAVLERGEKLDDLVAKSDSLSMHSK 825
P EAD L KIQ DLDETKIILH TI++VL+RGE+LD LV KS LS S+
Sbjct: 151 PAEADKLMKIQRDLDETKIILHKTIESVLQRGERLDSLVEKSSDLSAASQ 200
>01_07_0284 -
42472309-42472359,42472778-42472864,42473384-42473449,
42474608-42474712,42475129-42475200,42475421-42475543
Length = 167
Score = 115 bits (277), Expect = 6e-26
Identities = 62/124 (50%), Positives = 76/124 (61%), Gaps = 1/124 (0%)
Frame = +1
Query: 496 DNLAGVLISDHEYPNRVAHTLITKTLDEFTAAVPSSTWATGK-ESTIDFPSLALHLEKYQ 672
+ L + +D YP R A +L+ L+E+ W T K ++T + L L KYQ
Sbjct: 42 NGLCAIAFTDDHYPVRSAFSLLNTVLEEYHKTF-GERWRTAKTDNTQPWQYLDDALTKYQ 100
Query: 673 NPKEADALTKIQNDLDETKIILHDTIKAVLERGEKLDDLVAKSDSLSMHSKAFYKTAAKT 852
+P EAD L KIQ DLDETKIILH TI +VL RGE+LD LV KS LS S+ FYK A KT
Sbjct: 101 DPAEADKLLKIQRDLDETKIILHKTIDSVLSRGERLDSLVEKSSDLSAASQMFYKQAKKT 160
Query: 853 NSCC 864
NSCC
Sbjct: 161 NSCC 164
>03_06_0257 -
32697469-32697520,32698183-32698301,32698536-32698556,
32698903-32698979,32699331-32699477,32699561-32699721,
32700320-32700522
Length = 259
Score = 50.0 bits (114), Expect = 4e-06
Identities = 45/199 (22%), Positives = 85/199 (42%), Gaps = 6/199 (3%)
Frame = +1
Query: 277 MVKVYALLVLYKGINNASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSV 456
MVK+ + + G+ A L D + ++++ + F K + + H ASR S+
Sbjct: 1 MVKLTMVARVTDGLPLAEGLDDGRDQKDADFYKQQAKLLF-----KNLSKGQHEASRMSI 55
Query: 457 KEGEYMLQ----VYVRADNLAGVLISDHEYPNRVAHTLITKTLDEFTAAVPSSTWATGKE 624
+ G Y Q +Y+ + + + D YP ++A + +EF S +
Sbjct: 56 ETGPYFFQYPYVLYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGSQIETAARP 115
Query: 625 -STIDFPSLALHLEK-YQNPKEADALTKIQNDLDETKIILHDTIKAVLERGEKLDDLVAK 798
+ I F + +K Y + + L K+ ++L E I+ ++ VL GEKLD +
Sbjct: 116 YAFIKFDTFIQKTKKLYLDTRTQRNLAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVTEM 175
Query: 799 SDSLSMHSKAFYKTAAKTN 855
S L+ ++ + A N
Sbjct: 176 STRLTSDTRMYADKAKDLN 194
>03_06_0347 +
33293915-33294104,33295143-33295284,33295365-33295485,
33295590-33295652,33296524-33296553,33297411-33297905
Length = 346
Score = 48.0 bits (109), Expect = 1e-05
Identities = 30/120 (25%), Positives = 61/120 (50%), Gaps = 4/120 (3%)
Frame = +1
Query: 484 YVRADNLAGVLISDHEYPNRVAHTLITKTLDEFTAAVPSSTWATGKESTI--DFPS-LAL 654
Y+ D +++ ++ + + D+FT AT +++ DF S L
Sbjct: 57 YLVEDGFTYCVVAVESVGRQIPIAFLDRVKDDFTKRYAGGKAATAAANSLNRDFGSKLKE 116
Query: 655 HLEK-YQNPKEADALTKIQNDLDETKIILHDTIKAVLERGEKLDDLVAKSDSLSMHSKAF 831
H++ +P+E L K++ + E K ++ + I+ VL+RGEK++ LV K+++L ++ F
Sbjct: 117 HMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDF 176
>03_01_0459 +
3533718-3533916,3535009-3535150,3535290-3535410,
3535513-3535575,3535677-3535823
Length = 223
Score = 47.2 bits (107), Expect = 2e-05
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +1
Query: 640 PSLALHLEKY--QNPKEADALTKIQNDLDETKIILHDTIKAVLERGEKLDDLVAKSDSLS 813
P L H+ KY +P+E D L K++ + E K ++ I+ VL+RGEK++ LV K++ L
Sbjct: 115 PKLKEHM-KYCDAHPEEIDKLAKVKAQVTEVKGVMMQNIEKVLDRGEKIELLVDKTEDLR 173
Query: 814 MHSKAFYKTAAK 849
++ F K K
Sbjct: 174 SQAQDFRKAGTK 185
>06_01_0521 - 3773749-3773931,3774295-3774485,3775115-3775334
Length = 197
Score = 44.8 bits (101), Expect = 1e-04
Identities = 19/68 (27%), Positives = 41/68 (60%)
Frame = +1
Query: 646 LALHLEKYQNPKEADALTKIQNDLDETKIILHDTIKAVLERGEKLDDLVAKSDSLSMHSK 825
L+ ++ Y N AD + +++ ++ + + ++ D I VLERG++LD LV K+ ++ ++
Sbjct: 112 LSQQMDYYSNDPNADRINRMRGEISQVRTVMIDNIDKVLERGDRLDMLVDKTANMQGNTI 171
Query: 826 AFYKTAAK 849
F + A +
Sbjct: 172 RFKRQARR 179
>07_01_0680 +
5128023-5128212,5128629-5128667,5129496-5129637,
5129727-5129847,5129951-5130013,5130114-5130203,
5130572-5130619,5131114-5131260
Length = 279
Score = 42.7 bits (96), Expect = 5e-04
Identities = 27/115 (23%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Frame = +1
Query: 502 LAGVLISDHEYPNRVAHTLITKTLDEFTAAVPSSTWATGKESTI--DFPS-LALHLEK-Y 669
LA +++ ++ + + ++FT AT +++ +F S L H++
Sbjct: 76 LAYCVVAVESVGRQIPIAFLDRVKEDFTKRYGGGKAATAAANSLNREFGSKLKEHMQYCV 135
Query: 670 QNPKEADALTKIQNDLDETKIILHDTIKAVLERGEKLDDLVAKSDSLSMHSKAFY 834
+P+E L K++ + E K ++ + I+ VL+RGEK++ LV K+++L + +
Sbjct: 136 DHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQNSGIF 190
>01_01_0945 - 7439776-7440026,7440109-7440269,7440824-7441011
Length = 199
Score = 41.1 bits (92), Expect = 0.002
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Frame = +1
Query: 412 KTMVERTHPASRQSVKEGEYMLQVYVRADNLAGVLISDHEYPNRVAHTLITKTLDEFTAA 591
K + + H ASR S++ G Y+ Y+ + + + D YP ++A + +EF
Sbjct: 41 KNLSKGQHEASRMSIETGPYLFH-YIIEGRVCYLTMCDCSYPKKLAFQYLEDLKNEFERV 99
Query: 592 VPSSTWATGKE-STIDFPSLALHLEK-YQNPKEADALTKIQNDLDETKIILHDTIKAVLE 765
+ + + I F + +K Y + + L K+ ++L E I+ + VL
Sbjct: 100 NGNQIETAARPYAFIKFDTFIQKTKKLYLDTRTQRNLAKLNDELYEVHQIMTRNFQEVLG 159
Query: 766 RGEKLD 783
GEKLD
Sbjct: 160 VGEKLD 165
>12_01_0405 -
3207977-3208018,3208097-3208215,3208303-3208429,
3208776-3208914,3209001-3209227,3209389-3209522,
3209659-3209779
Length = 302
Score = 33.1 bits (72), Expect = 0.43
Identities = 22/86 (25%), Positives = 41/86 (47%)
Frame = +1
Query: 502 LAGVLISDHEYPNRVAHTLITKTLDEFTAAVPSSTWATGKESTIDFPSLALHLEKYQNPK 681
L +L+++ E L D AAV + A G +S + +A L + QN
Sbjct: 160 LREILLNEQESMYERYAALFALRNDSRDAAVSAIVAALGAKSALLKHEVAYVLGQLQNKA 219
Query: 682 EADALTKIQNDLDETKIILHDTIKAV 759
+DAL+ + ++DE ++ H+ +A+
Sbjct: 220 ASDALSTVLKNVDEHPMVRHEAAEAL 245
>08_02_0127 +
12840738-12840913,12841475-12841635,12842123-12842202,
12842435-12842550,12842570-12842705,12842738-12842872
Length = 267
Score = 33.1 bits (72), Expect = 0.43
Identities = 23/102 (22%), Positives = 47/102 (46%)
Frame = +1
Query: 277 MVKVYALLVLYKGINNASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSV 456
MVK+ + + G+ L DL+ ++++ + F K + + H ASR S+
Sbjct: 1 MVKLTMIARVTDGLPLVEGLDDGRDLKDADFYKQQAKLLF-----KNLSKGQHEASRMSI 55
Query: 457 KEGEYMLQVYVRADNLAGVLISDHEYPNRVAHTLITKTLDEF 582
+ G Y+++ + + + DH YP ++A + +EF
Sbjct: 56 ETGPYIIE-----GRVCYLTMCDHSYPKKLAFQYLEDLKNEF 92
>04_01_0415 -
5491968-5492069,5492173-5492271,5492900-5492989,
5493074-5493188,5494928-5494995
Length = 157
Score = 32.7 bits (71), Expect = 0.57
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = -2
Query: 777 LLTSLKYSFYCIM*NNFRFIQIILNFRQCISFFGILVFF 661
++T + Y FY + +F+Q+ + F Q ++ FG L+FF
Sbjct: 97 VITPVVYDFYNYEMESSQFVQLFVKFSQNLALFGALLFF 135
>12_02_1187 -
26793455-26793496,26793599-26793717,26793813-26793939,
26794382-26794520,26794565-26794833,26794923-26795056,
26795630-26795750
Length = 316
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1
Query: 574 DEFTAAVPSSTWATGKESTIDFPSLALHLEKYQNPKEADALTKIQNDLDETKIILHDTIK 753
D AAV + A G +S + +A L + QN +DAL+ + ++DE ++ H+ +
Sbjct: 198 DSGDAAVSAIVAALGVKSALLRHEVAYVLGQLQNKAASDALSTVLKNVDEHPMVRHEAAE 257
Query: 754 AV 759
A+
Sbjct: 258 AL 259
>03_01_0346 -
2721667-2721768,2721853-2721951,2722868-2722957,
2723037-2723151,2724720-2724787
Length = 157
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -2
Query: 774 LTSLKYSFYCIM*NNFRFIQIILNFRQCISFFGILVFF 661
+T + Y FY F+Q+ + F Q ++ FG L+FF
Sbjct: 98 ITPVVYDFYNYDMEKSEFVQLFMKFTQNLALFGALLFF 135
>02_05_1125 +
34282559-34282796,34283247-34283437,34283540-34283629,
34283630-34283793,34284139-34284352
Length = 298
Score = 29.5 bits (63), Expect = 5.3
Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Frame = +1
Query: 706 QNDLDETKI----ILHDTIKAVLERGEKLDDLVAKSDSLSMHSKAFYKTAAK 849
+ND++E + ++ D I VLERG++L+ LV K+ ++ ++ F + A +
Sbjct: 164 KNDINENFLQVRNVMIDNIDKVLERGDRLELLVDKTATMQGNTMRFKRQARR 215
>02_01_0717 +
5351504-5351602,5353401-5353499,5353574-5353675,
5353756-5353815,5353900-5354006,5354114-5354196,
5354372-5354462,5354561-5354768
Length = 282
Score = 28.7 bits (61), Expect = 9.3
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +1
Query: 610 ATGKESTIDFPSLALHLEKYQNPKEADALTKIQNDLDETKIILHDTIKAVL--ERGEKLD 783
A+ +E + LAL L +NP + +A K Q L + IL D K L E G D
Sbjct: 41 ASQQEIKKAYHKLALRLHPDKNPGDEEAKEKFQ-QLQKVISILGDEEKRALYDETGIADD 99
Query: 784 D-LVAK-SDSLSMHSKAFYKTAAKTN 855
D LV + +D+L + +A YK + +
Sbjct: 100 DALVGEAADNLQEYFRAVYKKVTEAD 125
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,133,729
Number of Sequences: 37544
Number of extensions: 409008
Number of successful extensions: 817
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3538190388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -