Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_O21
         (1162 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    24   2.2  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   2.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   2.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   6.8  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    22   9.0  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
 Frame = +1

Query: 652 LHLEKYQN----PKEADALTKIQNDLDETKIILHDTIKAVLERGEKLDDLVAKSDSLSMH 819
           L LEKY+     P +A + + +  D DE +  L      V       D      DS++  
Sbjct: 308 LDLEKYEGISSTPSQASSCSCL--DCDEIRESLDTQFLQVCRSRRHSDSCCLCLDSMNAV 365

Query: 820 SKAFYKTAAKTNSCCNF*TVYY 885
            + F ++  + NSC      YY
Sbjct: 366 IRNFNESENRRNSCLGSTETYY 387


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
 Frame = +1

Query: 247 RPSDKNYLTKMVKVYALL--VLYKGINNASILK--GAYDLRS--FSYFQRSSVQEFMTFV 408
           + +DK++L K  KVY LL  V    + N +      A+++ +   SY   ++V+EF++  
Sbjct: 27  KTADKDFLLKQKKVYNLLYRVAQPALANITWYNEGQAWNIEANIDSYTNAAAVKEFLSIY 86

Query: 409 SKTMVER 429
              M+ R
Sbjct: 87  KHGMLPR 93


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
 Frame = +1

Query: 247 RPSDKNYLTKMVKVYALL--VLYKGINNASILK--GAYDLRS--FSYFQRSSVQEFMTFV 408
           + +DK++L K  KVY LL  V    + N +      A+++ +   SY   ++V+EF++  
Sbjct: 27  KTADKDFLLKQKKVYNLLYRVAQPALANITWYNEGQAWNIEANIDSYTNAAAVKEFLSIY 86

Query: 409 SKTMVER 429
              M+ R
Sbjct: 87  KHGMLPR 93


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = +1

Query: 520 SDHEYPNRVAHTLITKTLDEFTAAVPSSTWATG--KESTI 633
           S    P  +  T  T T    TAA  ++T ATG  K+ T+
Sbjct: 99  SSTSLPATITTTTTTTTTTTATAAATATTTATGLIKQETL 138


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 366 TKTPKIISTFQNGC 325
           +K PKIIS+  N C
Sbjct: 298 SKEPKIISSLSNSC 311


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 262,437
Number of Sequences: 438
Number of extensions: 4991
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 39403827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)