Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_O18
(1223 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 35 0.10
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 33 0.31
Z49907-2|CAA90084.1| 324|Caenorhabditis elegans Hypothetical pr... 32 0.72
J03146-1|AAA65468.1| 324|Caenorhabditis elegans collagen protein. 32 0.72
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 31 2.2
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 30 3.8
U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule abnor... 30 3.8
U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule abnor... 30 3.8
AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein. 30 3.8
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 29 5.1
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 29 6.7
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 29 6.7
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 29 6.7
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 29 8.8
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 8.8
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 29 8.8
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 35.1 bits (77), Expect = 0.10
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = +1
Query: 340 GXGXGGEGFXXXXXGGGGGERGGXXXXXTGEXGGXXG 450
G G GG G GGGGG RGG G GG G
Sbjct: 91 GGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGG 127
Score = 33.1 bits (72), Expect = 0.41
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +1
Query: 340 GXGXGGEGFXXXXXGGGGGERGGXXXXXTGEXGGXXG 450
G G GG G GGGGG GG G GG G
Sbjct: 98 GGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGGRG 134
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +1
Query: 340 GXGXGGEGFXXXXXGGGG-GERGGXXXXXTGEXGGXXG 450
G G GG G GGGG G RGG G GG G
Sbjct: 83 GNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGG 120
Score = 29.1 bits (62), Expect = 6.7
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +1
Query: 337 KGXGXGGEGFXXXXXGGGGGERGGXXXXXTGEXGGXXG 450
+G G G G G GGG GG G GG G
Sbjct: 68 RGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRG 105
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 33.5 bits (73), Expect = 0.31
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +1
Query: 340 GXGXGGEGFXXXXXGGGGGERGGXXXXXTGEXGGXXGXP 456
G G GG G+ GGGG GG G GG G P
Sbjct: 106 GGGMGGGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGP 144
>Z49907-2|CAA90084.1| 324|Caenorhabditis elegans Hypothetical
protein B0491.2 protein.
Length = 324
Score = 32.3 bits (70), Expect = 0.72
Identities = 28/111 (25%), Positives = 36/111 (32%)
Frame = +3
Query: 450 GPXXPPXEXGIXPPKGGKXXGXKXGKXGXKXFXKRREXXXXXXXXXXXXXAXXPNPPKKG 629
GP PP G P+G G + G+ G + P PP +
Sbjct: 172 GPVGPPGALGRPGPRG--LPGPR-GQNGNPGRDGQPGHPGEQGSSGQIGKIGEPGPPGEK 228
Query: 630 SXKXXXPPRXXNPKKXXQXKGGXXXXGXGGXGXPPGKXPGXXXPXKPXGKR 782
P PK +G G G PPG+ PG P P GK+
Sbjct: 229 GRDAEHPIGRPGPKGPRGDQGPTGPAGQNGLHGPPGE-PGTVGPEGPSGKQ 278
>J03146-1|AAA65468.1| 324|Caenorhabditis elegans collagen protein.
Length = 324
Score = 32.3 bits (70), Expect = 0.72
Identities = 28/111 (25%), Positives = 36/111 (32%)
Frame = +3
Query: 450 GPXXPPXEXGIXPPKGGKXXGXKXGKXGXKXFXKRREXXXXXXXXXXXXXAXXPNPPKKG 629
GP PP G P+G G + G+ G + P PP +
Sbjct: 172 GPVGPPGALGRPGPRG--LPGPR-GQNGNPGRDGQPGHPGEQGSSGQIGKIGEPGPPGEK 228
Query: 630 SXKXXXPPRXXNPKKXXQXKGGXXXXGXGGXGXPPGKXPGXXXPXKPXGKR 782
P PK +G G G PPG+ PG P P GK+
Sbjct: 229 GRDAEHPIGGPGPKGPRGDQGPTGPAGQNGLHGPPGE-PGTVGPEGPSGKQ 278
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +1
Query: 337 KGXGXGGEGFXXXXXGG-GGGERGGXXXXXTGEXGG 441
+G G GG G GG GGG RGG G GG
Sbjct: 40 RGGGYGGGGGGGYGGGGYGGGGRGGGRGGSNGSAGG 75
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 30.3 bits (65), Expect = 2.9
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +1
Query: 346 GXGGEGFXXXXXGGGGGERGGXXXXXT-GEXGGXXG 450
G GG G GGGGG RGG G+ GG G
Sbjct: 327 GGGGRGGFDGGRGGGGGFRGGDRGGFRGGDRGGFRG 362
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 29.9 bits (64), Expect = 3.8
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +1
Query: 340 GXGXGGEGFXXXXXGGGGGERGGXXXXXTGEXGGXXG 450
G G GG G GGGGG GG + G G
Sbjct: 788 GGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGG 824
Score = 29.9 bits (64), Expect = 3.8
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +1
Query: 340 GXGXGGEGFXXXXXGGG-GGERGGXXXXXTGEXGGXXG 450
G G GG G GGG GG GG +G GG G
Sbjct: 791 GGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGG 828
>U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule
abnormality protein 1,isoform a protein.
Length = 730
Score = 29.9 bits (64), Expect = 3.8
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +1
Query: 340 GXGXGGEGFXXXXXGGG-GGERGGXXXXXTGEXGGXXG 450
G G GG G GG GG+RGG G+ GG G
Sbjct: 674 GGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRGGRGG 711
>U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule
abnormality protein 1,isoform b protein.
Length = 771
Score = 29.9 bits (64), Expect = 3.8
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +1
Query: 340 GXGXGGEGFXXXXXGGG-GGERGGXXXXXTGEXGGXXG 450
G G GG G GG GG+RGG G+ GG G
Sbjct: 715 GGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRGGRGG 752
>AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein.
Length = 730
Score = 29.9 bits (64), Expect = 3.8
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +1
Query: 340 GXGXGGEGFXXXXXGGG-GGERGGXXXXXTGEXGGXXG 450
G G GG G GG GG+RGG G+ GG G
Sbjct: 674 GGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRGGRGG 711
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.5 bits (63), Expect = 5.1
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = +1
Query: 340 GXGXGGEGFXXXXXGGGGGERGGXXXXXTGEXGGXXGXPXXRXXKXESXPPKXEXGXGKX 519
G G GG G GGGGG GG G G G PP G G
Sbjct: 66 GGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGG 125
Query: 520 XG 525
G
Sbjct: 126 GG 127
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 29.5 bits (63), Expect = 5.1
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 346 GXGGEGFXXXXXGGGGGERGGXXXXXTGEXGG 441
G GG GF G GG RGG G GG
Sbjct: 9 GGGGGGFRGGRGGDRGGSRGGFGGGGRGGYGG 40
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.5 bits (63), Expect = 5.1
Identities = 28/104 (26%), Positives = 34/104 (32%)
Frame = -1
Query: 737 PGGXXXPPXAPPXXPPFXLXXLFGVXXPGXGXXFX*PLFGGVGXXGXXRXFAFFXFXXFF 558
PGG PP PP P G PG G P F G G + ++
Sbjct: 440 PGGSGAPPPGPPGAYP-------GNGAPG-GPPGGPPQFPG--HPGMDPNYHYYQQHGMM 489
Query: 557 PPFXKXFXPPFPXFXPXPLSXFGGXDSXFXXRXXGXPXXPPXSP 426
PP P P + P ++ F R G P PP P
Sbjct: 490 PPH-----PGHPGYPPQHMNAFSPGQYPGHQRPPGGPGGPPPGP 528
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical protein
T07D4.3 protein.
Length = 1301
Score = 29.1 bits (62), Expect = 6.7
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +1
Query: 352 GGEGFXXXXXGGGGGERGGXXXXXTGEXGGXXG 450
G G GGGGG RGG G GG G
Sbjct: 1263 GNVGSGYRGAGGGGGYRGGRGGRGGGRGGGGRG 1295
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 29.1 bits (62), Expect = 6.7
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +1
Query: 340 GXGXGGEG-FXXXXXGGGGGERGGXXXXXTGEXGGXXG 450
G G GG G + GGGG RGG G GG G
Sbjct: 526 GGGYGGPGAYGDFGAYGGGGFRGGMRGSPRGGMGGGGG 563
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 29.1 bits (62), Expect = 6.7
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +1
Query: 337 KGXGXGGEGFXXXXXGGGGGERGGXXXXXTGEXGGXXG 450
+G GG G GGGGG RGG G GG G
Sbjct: 167 RGSDRGGRG--GFGRGGGGGFRGGDRGGFGGGRGGFRG 202
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 28.7 bits (61), Expect = 8.8
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +1
Query: 337 KGXGXGGEGFXXXXXGGGGGERGGXXXXXTGEXGGXXGXPXXR 465
+G G GG G GGGGG+R G G GG G P R
Sbjct: 204 RGGGGGGGG---DRYGGGGGDRYGGDRY--GGGGGRRGSPDRR 241
Score = 28.7 bits (61), Expect = 8.8
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +1
Query: 346 GXGGEGFXXXXXGGGGGERGGXXXXXTGEXGGXXG 450
G GG+ + GGGGG RG GG G
Sbjct: 217 GGGGDRYGGDRYGGGGGRRGSPDRRGGFRSGGGGG 251
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 28.7 bits (61), Expect = 8.8
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Frame = +1
Query: 340 GXGXGGEGFXXXXXGGG--GGERGGXXXXXTGEXGGXXGXPXXRXXKXESXPP 492
G G GG G GGG GG GG +G GG P PP
Sbjct: 107 GCGGGGGGGCGGGGGGGCGGGGGGGGGGYASGGSGGFASAPVSLPAPSYGGPP 159
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 28.7 bits (61), Expect = 8.8
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +1
Query: 340 GXGXGGEGFXXXXXGGGGGERGGXXXXXTGEXGGXXG 450
G GG+G GG GG +GG G+ G G
Sbjct: 184 GQNGGGQGGNQGGGGGRGGNQGGEQGGWGGQGGSQGG 220
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.309 0.141 0.430
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,442,556
Number of Sequences: 27780
Number of extensions: 149082
Number of successful extensions: 558
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 501
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3380764392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
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