Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_O15
         (1207 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0197 + 1554449-1555101,1555462-1555558                           34   0.26 
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    31   2.4  
02_05_0686 - 30900748-30902167,30903442-30904742                       30   3.2  
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863...    29   5.5  

>11_01_0197 + 1554449-1555101,1555462-1555558
          Length = 249

 Score = 33.9 bits (74), Expect = 0.26
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
 Frame = +2

Query: 212 IIRLQNLPWSANALDIRNFFRGLSIPEGGVHIV----GGELGDAFIAF 343
           +++L+ LP+SA   DI  FF    + E  VHI     G   G+AF+ F
Sbjct: 151 VLKLRGLPYSATTEDIIKFFVEYELTEENVHIAYRPDGKATGEAFVEF 198



 Score = 33.5 bits (73), Expect = 0.34
 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +2

Query: 215 IRLQNLPWSANALDIRNFFRGLSIPEG-GVHIVGGELGDAFIAF 343
           +RL+ LP+  + LDI  FF GL I +   VH  G   G+AF+ F
Sbjct: 35  VRLRGLPFDCDDLDIFKFFVGLDIVDCLLVHKNGRFTGEAFVVF 78


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 22/85 (25%), Positives = 25/85 (29%), Gaps = 1/85 (1%)
 Frame = +2

Query: 926  PXIGGYXGKXXXXXAXXARTXKXPXXGVXX-RPPPXXXXXNXXXXXXGNPXGXXXPXVPP 1102
            P +GG  G          R    P        PPP     +        P G   P +PP
Sbjct: 1152 PPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPP 1211

Query: 1103 ETPXXPPXPXXXXXKPXXXXPXGXG 1177
              P  PP P      P    P G G
Sbjct: 1212 GVPGGPPPPPGGRGLP--APPGGRG 1234


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 13/36 (36%), Positives = 13/36 (36%)
 Frame = +2

Query: 1097 PPETPXXPPXPXXXXXKPXXXXPXGXGGXXXXPPGG 1204
            PP  P  PP P      P    P G       PPGG
Sbjct: 337  PPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGG 372


>03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,
            8631332-8631397,8631891-8631967,8632659-8633070
          Length = 351

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 2/47 (4%)
 Frame = +2

Query: 1064 GNPXGXXXPXVPPETPX--XPPXPXXXXXKPXXXXPXGXGGXXXXPP 1198
            G P     P VPP  P    PP P      P    P   GG    PP
Sbjct: 262  GGPPRPPPPQVPPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPPP 308


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,970,257
Number of Sequences: 37544
Number of extensions: 366331
Number of successful extensions: 848
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3689769684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)