Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_O15
(1207 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB018308-1|BAA34485.2| 952|Homo sapiens KIAA0765 protein protein. 75 4e-13
BC013981-1|AAH13981.1| 932|Homo sapiens RNA binding motif prote... 75 7e-13
BC012787-1|AAH12787.1| 932|Homo sapiens RNA binding motif prote... 75 7e-13
AL109827-26|CAO72113.1| 134|Homo sapiens RNA binding motif prot... 75 7e-13
AL109827-25|CAO72112.1| 143|Homo sapiens RNA binding motif prot... 75 7e-13
AL109827-24|CAI20134.1| 291|Homo sapiens RNA binding motif prot... 75 7e-13
AL109827-23|CAB87611.1| 932|Homo sapiens RNA binding motif prot... 75 7e-13
AJ289772-1|CAC20441.1| 932|Homo sapiens RNA binding motif prote... 75 7e-13
AF393214-1|AAM73682.1| 932|Homo sapiens swan protein. 75 7e-13
AF345335-1|AAL83755.1| 932|Homo sapiens SWAN protein. 75 7e-13
AF345332-1|AAL83752.1| 932|Homo sapiens SWAN protein. 75 7e-13
BC039260-1|AAH39260.1| 765|Homo sapiens RBM12B protein protein. 71 8e-12
BC030146-1|AAH30146.1| 717|Homo sapiens RNA binding motif prote... 39 0.042
AK025571-1|BAB15173.1| 727|Homo sapiens osaminidase mRNA. prot... 39 0.042
BC112043-1|AAI12044.1| 392|Homo sapiens RBM35A protein protein. 38 0.055
BC099916-1|AAH99916.2| 677|Homo sapiens RNA binding motif prote... 38 0.055
BC067098-1|AAH67098.2| 681|Homo sapiens RNA binding motif prote... 38 0.055
BC019932-1|AAH19932.1| 656|Homo sapiens RBM35A protein protein. 38 0.055
AK000178-1|BAA90992.1| 358|Homo sapiens protein ( Homo sapiens ... 38 0.055
L28010-1|AAC37584.1| 415|Homo sapiens HnRNP F protein protein. 38 0.096
BC106008-1|AAI06009.1| 415|Homo sapiens HNRPF protein protein. 38 0.096
BC016736-1|AAH16736.1| 415|Homo sapiens HNRPF protein protein. 38 0.096
BC015580-1|AAH15580.1| 415|Homo sapiens HNRPF protein protein. 38 0.096
BC004254-1|AAH04254.1| 415|Homo sapiens heterogeneous nuclear r... 38 0.096
BC001432-1|AAH01432.1| 415|Homo sapiens heterogeneous nuclear r... 38 0.096
AL512654-2|CAI17066.1| 415|Homo sapiens heterogeneous nuclear r... 38 0.096
U07231-1|AAC95399.1| 424|Homo sapiens G-rich sequence factor-1 ... 36 0.29
BC040485-1|AAH40485.1| 435|Homo sapiens GRSF1 protein protein. 36 0.29
AK127161-1|BAC86863.1| 447|Homo sapiens protein ( Homo sapiens ... 36 0.29
AK090755-1|BAC03513.1| 415|Homo sapiens protein ( Homo sapiens ... 36 0.29
AC021989-1|AAY40942.1| 435|Homo sapiens unknown protein. 36 0.29
BC096212-1|AAH96212.1| 162|Homo sapiens PRB3 protein protein. 33 2.1
BC096211-1|AAH96211.1| 309|Homo sapiens PRB3 protein protein. 33 2.1
BC096210-1|AAH96210.1| 309|Homo sapiens PRB3 protein protein. 33 2.1
BC096209-1|AAH96209.1| 309|Homo sapiens PRB3 protein protein. 33 2.1
L32610-1|AAD45179.1| 346|Homo sapiens ribonucleoprotein protein. 32 3.6
BC039824-1|AAH39824.1| 331|Homo sapiens heterogeneous nuclear r... 32 3.6
AK223441-1|BAD97161.1| 346|Homo sapiens heterogeneous nuclear r... 32 3.6
AF132361-1|AAF68849.1| 331|Homo sapiens hnRNP 2H9A protein. 32 3.6
AF132360-2|AAF68847.1| 331|Homo sapiens hnRNP 2H9A protein. 32 3.6
AF132360-1|AAF68843.1| 346|Homo sapiens hnRNP 2H9 protein. 32 3.6
U78027-1|AAB64202.1| 449|Homo sapiens FTP3 protein. 31 6.3
L22009-1|AAA91346.1| 449|Homo sapiens hnRNP H protein. 31 6.3
CR456778-1|CAG33059.1| 449|Homo sapiens HNRPH1 protein. 31 6.3
BC130345-1|AAI30346.1| 449|Homo sapiens heterogeneous nuclear r... 31 6.3
BC130343-1|AAI30344.1| 449|Homo sapiens heterogeneous nuclear r... 31 6.3
BC001348-1|AAH01348.1| 449|Homo sapiens HNRPH1 protein protein. 31 6.3
AL035422-7|CAB55879.2| 449|Homo sapiens heterogeneous nuclear r... 31 6.3
>AB018308-1|BAA34485.2| 952|Homo sapiens KIAA0765 protein protein.
Length = 952
Score = 75.4 bits (177), Expect = 4e-13
Identities = 33/50 (66%), Positives = 42/50 (84%)
Frame = +2
Query: 194 ETTMSVIIRLQNLPWSANALDIRNFFRGLSIPEGGVHIVGGELGDAFIAF 343
+ +M+V+IRLQ LP A +DIR+FF GL+IP+GGVHIVGGELG+AFI F
Sbjct: 18 QRSMAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVF 67
Score = 34.3 bits (75), Expect = 0.90
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +2
Query: 209 VIIRLQNLPWSANALDIRNFFRGLSIPEGGVHIV----GGELGDAFIAFR 346
V + N+P+S +D+ F G+ + E VH++ G LG A + F+
Sbjct: 564 VCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFK 613
>BC013981-1|AAH13981.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 74.5 bits (175), Expect = 7e-13
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +2
Query: 203 MSVIIRLQNLPWSANALDIRNFFRGLSIPEGGVHIVGGELGDAFIAF 343
M+V+IRLQ LP A +DIR+FF GL+IP+GGVHIVGGELG+AFI F
Sbjct: 1 MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVF 47
Score = 34.3 bits (75), Expect = 0.90
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +2
Query: 209 VIIRLQNLPWSANALDIRNFFRGLSIPEGGVHIV----GGELGDAFIAFR 346
V + N+P+S +D+ F G+ + E VH++ G LG A + F+
Sbjct: 544 VCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFK 593
>BC012787-1|AAH12787.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 74.5 bits (175), Expect = 7e-13
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +2
Query: 203 MSVIIRLQNLPWSANALDIRNFFRGLSIPEGGVHIVGGELGDAFIAF 343
M+V+IRLQ LP A +DIR+FF GL+IP+GGVHIVGGELG+AFI F
Sbjct: 1 MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVF 47
Score = 34.3 bits (75), Expect = 0.90
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +2
Query: 209 VIIRLQNLPWSANALDIRNFFRGLSIPEGGVHIV----GGELGDAFIAFR 346
V + N+P+S +D+ F G+ + E VH++ G LG A + F+
Sbjct: 544 VCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFK 593
>AL109827-26|CAO72113.1| 134|Homo sapiens RNA binding motif protein
12 protein.
Length = 134
Score = 74.5 bits (175), Expect = 7e-13
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +2
Query: 203 MSVIIRLQNLPWSANALDIRNFFRGLSIPEGGVHIVGGELGDAFIAF 343
M+V+IRLQ LP A +DIR+FF GL+IP+GGVHIVGGELG+AFI F
Sbjct: 1 MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVF 47
>AL109827-25|CAO72112.1| 143|Homo sapiens RNA binding motif protein
12 protein.
Length = 143
Score = 74.5 bits (175), Expect = 7e-13
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +2
Query: 203 MSVIIRLQNLPWSANALDIRNFFRGLSIPEGGVHIVGGELGDAFIAF 343
M+V+IRLQ LP A +DIR+FF GL+IP+GGVHIVGGELG+AFI F
Sbjct: 1 MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVF 47
>AL109827-24|CAI20134.1| 291|Homo sapiens RNA binding motif protein
12 protein.
Length = 291
Score = 74.5 bits (175), Expect = 7e-13
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +2
Query: 203 MSVIIRLQNLPWSANALDIRNFFRGLSIPEGGVHIVGGELGDAFIAF 343
M+V+IRLQ LP A +DIR+FF GL+IP+GGVHIVGGELG+AFI F
Sbjct: 1 MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVF 47
>AL109827-23|CAB87611.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 74.5 bits (175), Expect = 7e-13
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +2
Query: 203 MSVIIRLQNLPWSANALDIRNFFRGLSIPEGGVHIVGGELGDAFIAF 343
M+V+IRLQ LP A +DIR+FF GL+IP+GGVHIVGGELG+AFI F
Sbjct: 1 MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVF 47
Score = 34.3 bits (75), Expect = 0.90
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +2
Query: 209 VIIRLQNLPWSANALDIRNFFRGLSIPEGGVHIV----GGELGDAFIAFR 346
V + N+P+S +D+ F G+ + E VH++ G LG A + F+
Sbjct: 544 VCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFK 593
>AJ289772-1|CAC20441.1| 932|Homo sapiens RNA binding motif protein
12 protein.
Length = 932
Score = 74.5 bits (175), Expect = 7e-13
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +2
Query: 203 MSVIIRLQNLPWSANALDIRNFFRGLSIPEGGVHIVGGELGDAFIAF 343
M+V+IRLQ LP A +DIR+FF GL+IP+GGVHIVGGELG+AFI F
Sbjct: 1 MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVF 47
Score = 34.3 bits (75), Expect = 0.90
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +2
Query: 209 VIIRLQNLPWSANALDIRNFFRGLSIPEGGVHIV----GGELGDAFIAFR 346
V + N+P+S +D+ F G+ + E VH++ G LG A + F+
Sbjct: 544 VCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFK 593
>AF393214-1|AAM73682.1| 932|Homo sapiens swan protein.
Length = 932
Score = 74.5 bits (175), Expect = 7e-13
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +2
Query: 203 MSVIIRLQNLPWSANALDIRNFFRGLSIPEGGVHIVGGELGDAFIAF 343
M+V+IRLQ LP A +DIR+FF GL+IP+GGVHIVGGELG+AFI F
Sbjct: 1 MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVF 47
Score = 34.3 bits (75), Expect = 0.90
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +2
Query: 209 VIIRLQNLPWSANALDIRNFFRGLSIPEGGVHIV----GGELGDAFIAFR 346
V + N+P+S +D+ F G+ + E VH++ G LG A + F+
Sbjct: 544 VCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFK 593
>AF345335-1|AAL83755.1| 932|Homo sapiens SWAN protein.
Length = 932
Score = 74.5 bits (175), Expect = 7e-13
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +2
Query: 203 MSVIIRLQNLPWSANALDIRNFFRGLSIPEGGVHIVGGELGDAFIAF 343
M+V+IRLQ LP A +DIR+FF GL+IP+GGVHIVGGELG+AFI F
Sbjct: 1 MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVF 47
Score = 34.3 bits (75), Expect = 0.90
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +2
Query: 209 VIIRLQNLPWSANALDIRNFFRGLSIPEGGVHIV----GGELGDAFIAFR 346
V + N+P+S +D+ F G+ + E VH++ G LG A + F+
Sbjct: 544 VCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFK 593
>AF345332-1|AAL83752.1| 932|Homo sapiens SWAN protein.
Length = 932
Score = 74.5 bits (175), Expect = 7e-13
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +2
Query: 203 MSVIIRLQNLPWSANALDIRNFFRGLSIPEGGVHIVGGELGDAFIAF 343
M+V+IRLQ LP A +DIR+FF GL+IP+GGVHIVGGELG+AFI F
Sbjct: 1 MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVF 47
Score = 34.3 bits (75), Expect = 0.90
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +2
Query: 209 VIIRLQNLPWSANALDIRNFFRGLSIPEGGVHIV----GGELGDAFIAFR 346
V + N+P+S +D+ F G+ + E VH++ G LG A + F+
Sbjct: 544 VCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFK 593
>BC039260-1|AAH39260.1| 765|Homo sapiens RBM12B protein protein.
Length = 765
Score = 70.9 bits (166), Expect = 8e-12
Identities = 30/47 (63%), Positives = 40/47 (85%)
Frame = +2
Query: 203 MSVIIRLQNLPWSANALDIRNFFRGLSIPEGGVHIVGGELGDAFIAF 343
M+V+IRL LP+ A +DIR+FF GL+IP+GGVHI+GGE+G+AFI F
Sbjct: 1 MAVVIRLLGLPFIAGPVDIRHFFTGLTIPDGGVHIIGGEIGEAFIIF 47
>BC030146-1|AAH30146.1| 717|Homo sapiens RNA binding motif protein
35B protein.
Length = 717
Score = 38.7 bits (86), Expect = 0.042
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +2
Query: 212 IIRLQNLPWSANALDIRNFFRGLSIPEGGVHIV----GGELGDAFIAF 343
++R + LPW ++ D+ FF+GL++ GGV + G G+A I F
Sbjct: 248 VVRARGLPWQSSDQDVARFFKGLNVARGGVALCLNAQGRRNGEALIRF 295
>AK025571-1|BAB15173.1| 727|Homo sapiens osaminidase mRNA.
protein.
Length = 727
Score = 38.7 bits (86), Expect = 0.042
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +2
Query: 212 IIRLQNLPWSANALDIRNFFRGLSIPEGGVHIV----GGELGDAFIAF 343
++R + LPW ++ D+ FF+GL++ GGV + G G+A I F
Sbjct: 258 VVRARGLPWQSSDQDVARFFKGLNVARGGVALCLNAQGRRNGEALIRF 305
>BC112043-1|AAI12044.1| 392|Homo sapiens RBM35A protein protein.
Length = 392
Score = 38.3 bits (85), Expect = 0.055
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Frame = +2
Query: 206 SVIIRLQNLPWSANALDIRNFFRGLSIPEGG----VHIVGGELGDAFIAF 343
+ ++R + LPW ++ DI FF+GL+I +GG ++ G G+A + F
Sbjct: 71 NTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRF 120
>BC099916-1|AAH99916.2| 677|Homo sapiens RNA binding motif protein
35A protein.
Length = 677
Score = 38.3 bits (85), Expect = 0.055
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Frame = +2
Query: 206 SVIIRLQNLPWSANALDIRNFFRGLSIPEGG----VHIVGGELGDAFIAF 343
+ ++R + LPW ++ DI FF+GL+I +GG ++ G G+A + F
Sbjct: 224 NTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRF 273
>BC067098-1|AAH67098.2| 681|Homo sapiens RNA binding motif protein
35A protein.
Length = 681
Score = 38.3 bits (85), Expect = 0.055
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Frame = +2
Query: 206 SVIIRLQNLPWSANALDIRNFFRGLSIPEGG----VHIVGGELGDAFIAF 343
+ ++R + LPW ++ DI FF+GL+I +GG ++ G G+A + F
Sbjct: 224 NTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRF 273
>BC019932-1|AAH19932.1| 656|Homo sapiens RBM35A protein protein.
Length = 656
Score = 38.3 bits (85), Expect = 0.055
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Frame = +2
Query: 206 SVIIRLQNLPWSANALDIRNFFRGLSIPEGG----VHIVGGELGDAFIAF 343
+ ++R + LPW ++ DI FF+GL+I +GG ++ G G+A + F
Sbjct: 272 NTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRF 321
>AK000178-1|BAA90992.1| 358|Homo sapiens protein ( Homo sapiens
cDNA FLJ20171 fis, clone COL09761. ).
Length = 358
Score = 38.3 bits (85), Expect = 0.055
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Frame = +2
Query: 206 SVIIRLQNLPWSANALDIRNFFRGLSIPEGG----VHIVGGELGDAFIAF 343
+ ++R + LPW ++ DI FF+GL+I +GG ++ G G+A + F
Sbjct: 64 NTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRF 113
>L28010-1|AAC37584.1| 415|Homo sapiens HnRNP F protein protein.
Length = 415
Score = 37.5 bits (83), Expect = 0.096
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Frame = +2
Query: 212 IIRLQNLPWSANALDIRNFFRGLSIPEG--GVHIV----GGELGDAFI 337
+++L+ LPWS + D++NF +I +G GVH + G + G+AF+
Sbjct: 12 VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFV 59
>BC106008-1|AAI06009.1| 415|Homo sapiens HNRPF protein protein.
Length = 415
Score = 37.5 bits (83), Expect = 0.096
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Frame = +2
Query: 212 IIRLQNLPWSANALDIRNFFRGLSIPEG--GVHIV----GGELGDAFI 337
+++L+ LPWS + D++NF +I +G GVH + G + G+AF+
Sbjct: 12 VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFV 59
>BC016736-1|AAH16736.1| 415|Homo sapiens HNRPF protein protein.
Length = 415
Score = 37.5 bits (83), Expect = 0.096
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Frame = +2
Query: 212 IIRLQNLPWSANALDIRNFFRGLSIPEG--GVHIV----GGELGDAFI 337
+++L+ LPWS + D++NF +I +G GVH + G + G+AF+
Sbjct: 12 VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFV 59
>BC015580-1|AAH15580.1| 415|Homo sapiens HNRPF protein protein.
Length = 415
Score = 37.5 bits (83), Expect = 0.096
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Frame = +2
Query: 212 IIRLQNLPWSANALDIRNFFRGLSIPEG--GVHIV----GGELGDAFI 337
+++L+ LPWS + D++NF +I +G GVH + G + G+AF+
Sbjct: 12 VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFV 59
>BC004254-1|AAH04254.1| 415|Homo sapiens heterogeneous nuclear
ribonucleoprotein F protein.
Length = 415
Score = 37.5 bits (83), Expect = 0.096
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Frame = +2
Query: 212 IIRLQNLPWSANALDIRNFFRGLSIPEG--GVHIV----GGELGDAFI 337
+++L+ LPWS + D++NF +I +G GVH + G + G+AF+
Sbjct: 12 VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFV 59
>BC001432-1|AAH01432.1| 415|Homo sapiens heterogeneous nuclear
ribonucleoprotein F protein.
Length = 415
Score = 37.5 bits (83), Expect = 0.096
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Frame = +2
Query: 212 IIRLQNLPWSANALDIRNFFRGLSIPEG--GVHIV----GGELGDAFI 337
+++L+ LPWS + D++NF +I +G GVH + G + G+AF+
Sbjct: 12 VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFV 59
>AL512654-2|CAI17066.1| 415|Homo sapiens heterogeneous nuclear
ribonucleoprotein F protein.
Length = 415
Score = 37.5 bits (83), Expect = 0.096
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Frame = +2
Query: 212 IIRLQNLPWSANALDIRNFFRGLSIPEG--GVHIV----GGELGDAFI 337
+++L+ LPWS + D++NF +I +G GVH + G + G+AF+
Sbjct: 12 VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFV 59
>U07231-1|AAC95399.1| 424|Homo sapiens G-rich sequence factor-1
protein.
Length = 424
Score = 35.9 bits (79), Expect = 0.29
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Frame = +2
Query: 191 EETTMSVIIRLQNLPWSANALDIRNFFRGLSIPEG--GVHIV----GGELGDAFI 337
EE +IR Q LPWS D+ NFF I G G+H + G GDA I
Sbjct: 88 EEVDDVFLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALI 142
Score = 32.3 bits (70), Expect = 3.6
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 212 IIRLQNLPWSANALDIRNFFRGLSI 286
++RL+ LP+S N DI +FF GL+I
Sbjct: 195 VVRLRGLPYSCNEKDIVDFFAGLNI 219
>BC040485-1|AAH40485.1| 435|Homo sapiens GRSF1 protein protein.
Length = 435
Score = 35.9 bits (79), Expect = 0.29
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Frame = +2
Query: 191 EETTMSVIIRLQNLPWSANALDIRNFFRGLSIPEG--GVHIV----GGELGDAFI 337
EE +IR Q LPWS D+ NFF I G G+H + G GDA I
Sbjct: 144 EEVDDVFLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALI 198
Score = 32.3 bits (70), Expect = 3.6
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 212 IIRLQNLPWSANALDIRNFFRGLSI 286
++RL+ LP+S N DI +FF GL+I
Sbjct: 251 VVRLRGLPYSCNEKDIVDFFAGLNI 275
>AK127161-1|BAC86863.1| 447|Homo sapiens protein ( Homo sapiens
cDNA FLJ45225 fis, clone BRCAN2020331, highly similar
to G-rich sequence factor-1. ).
Length = 447
Score = 35.9 bits (79), Expect = 0.29
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Frame = +2
Query: 191 EETTMSVIIRLQNLPWSANALDIRNFFRGLSIPEG--GVHIV----GGELGDAFI 337
EE +IR Q LPWS D+ NFF I G G+H + G GDA I
Sbjct: 111 EEVDDVFLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALI 165
Score = 31.9 bits (69), Expect = 4.8
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 212 IIRLQNLPWSANALDIRNFFRGLSI 286
++RL+ LP+S N DI +FF GL+I
Sbjct: 218 VVRLRGLPYSCNEEDIVDFFAGLNI 242
>AK090755-1|BAC03513.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ33436 fis, clone BRACE2021478, highly similar to
G-RICH SEQUENCE FACTOR-1. ).
Length = 415
Score = 35.9 bits (79), Expect = 0.29
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Frame = +2
Query: 191 EETTMSVIIRLQNLPWSANALDIRNFFRGLSIPEG--GVHIV----GGELGDAFI 337
EE +IR Q LPWS D+ NFF I G G+H + G GDA I
Sbjct: 79 EEVDDVFLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALI 133
Score = 32.3 bits (70), Expect = 3.6
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 212 IIRLQNLPWSANALDIRNFFRGLSI 286
++RL+ LP+S N DI +FF GL+I
Sbjct: 186 VVRLRGLPYSCNEKDIVDFFAGLNI 210
>AC021989-1|AAY40942.1| 435|Homo sapiens unknown protein.
Length = 435
Score = 35.9 bits (79), Expect = 0.29
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Frame = +2
Query: 191 EETTMSVIIRLQNLPWSANALDIRNFFRGLSIPEG--GVHIV----GGELGDAFI 337
EE +IR Q LPWS D+ NFF I G G+H + G GDA I
Sbjct: 144 EEVDDVFLIRAQGLPWSCTMEDVLNFFSDCRIRNGENGIHFLLNRDGKRRGDALI 198
Score = 32.3 bits (70), Expect = 3.6
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 212 IIRLQNLPWSANALDIRNFFRGLSI 286
++RL+ LP+S N DI +FF GL+I
Sbjct: 251 VVRLRGLPYSCNEKDIVDFFAGLNI 275
>BC096212-1|AAH96212.1| 162|Homo sapiens PRB3 protein protein.
Length = 162
Score = 33.1 bits (72), Expect = 2.1
Identities = 21/70 (30%), Positives = 22/70 (31%)
Frame = +2
Query: 995 PXXGVXXRPPPXXXXXNXXXXXXGNPXGXXXPXVPPETPXXPPXPXXXXXKPXXXXPXGX 1174
P G PPP G P G P P+ P PP KP P
Sbjct: 94 PHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPP-----AGKPQGPPPPPQ 148
Query: 1175 GGXXXXPPGG 1204
GG PP G
Sbjct: 149 GGRPHRPPQG 158
>BC096211-1|AAH96211.1| 309|Homo sapiens PRB3 protein protein.
Length = 309
Score = 33.1 bits (72), Expect = 2.1
Identities = 21/70 (30%), Positives = 22/70 (31%)
Frame = +2
Query: 995 PXXGVXXRPPPXXXXXNXXXXXXGNPXGXXXPXVPPETPXXPPXPXXXXXKPXXXXPXGX 1174
P G PPP G P G P P+ P PP KP P
Sbjct: 241 PHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPP-----AGKPQGPPPPPQ 295
Query: 1175 GGXXXXPPGG 1204
GG PP G
Sbjct: 296 GGRPHRPPQG 305
>BC096210-1|AAH96210.1| 309|Homo sapiens PRB3 protein protein.
Length = 309
Score = 33.1 bits (72), Expect = 2.1
Identities = 21/70 (30%), Positives = 22/70 (31%)
Frame = +2
Query: 995 PXXGVXXRPPPXXXXXNXXXXXXGNPXGXXXPXVPPETPXXPPXPXXXXXKPXXXXPXGX 1174
P G PPP G P G P P+ P PP KP P
Sbjct: 241 PHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPP-----AGKPQGPPPPPQ 295
Query: 1175 GGXXXXPPGG 1204
GG PP G
Sbjct: 296 GGRPHRPPQG 305
>BC096209-1|AAH96209.1| 309|Homo sapiens PRB3 protein protein.
Length = 309
Score = 33.1 bits (72), Expect = 2.1
Identities = 21/70 (30%), Positives = 22/70 (31%)
Frame = +2
Query: 995 PXXGVXXRPPPXXXXXNXXXXXXGNPXGXXXPXVPPETPXXPPXPXXXXXKPXXXXPXGX 1174
P G PPP G P G P P+ P PP KP P
Sbjct: 241 PHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPP-----AGKPQGPPPPPQ 295
Query: 1175 GGXXXXPPGG 1204
GG PP G
Sbjct: 296 GGRPHRPPQG 305
>L32610-1|AAD45179.1| 346|Homo sapiens ribonucleoprotein protein.
Length = 346
Score = 32.3 bits (70), Expect = 3.6
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Frame = +2
Query: 215 IRLQNLPWSANALDIRNFFRGLSIPEGGVHIV----GGELGDAFIAF 343
+RL+ LP+ + +I FF+GL I G+ + G G+AF+ F
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRSTGEAFVQF 64
>BC039824-1|AAH39824.1| 331|Homo sapiens heterogeneous nuclear
ribonucleoprotein H3 (2H9) protein.
Length = 331
Score = 32.3 bits (70), Expect = 3.6
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Frame = +2
Query: 215 IRLQNLPWSANALDIRNFFRGLSIPEGGVHIV----GGELGDAFIAF 343
+RL+ LP+ + +I FF+GL I G+ + G G+AF+ F
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRSTGEAFVQF 64
>AK223441-1|BAD97161.1| 346|Homo sapiens heterogeneous nuclear
ribonucleoprotein H3 isoform a variant protein.
Length = 346
Score = 32.3 bits (70), Expect = 3.6
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Frame = +2
Query: 215 IRLQNLPWSANALDIRNFFRGLSIPEGGVHIV----GGELGDAFIAF 343
+RL+ LP+ + +I FF+GL I G+ + G G+AF+ F
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRSTGEAFVQF 64
>AF132361-1|AAF68849.1| 331|Homo sapiens hnRNP 2H9A protein.
Length = 331
Score = 32.3 bits (70), Expect = 3.6
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Frame = +2
Query: 215 IRLQNLPWSANALDIRNFFRGLSIPEGGVHIV----GGELGDAFIAF 343
+RL+ LP+ + +I FF+GL I G+ + G G+AF+ F
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRSTGEAFVQF 64
>AF132360-2|AAF68847.1| 331|Homo sapiens hnRNP 2H9A protein.
Length = 331
Score = 32.3 bits (70), Expect = 3.6
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Frame = +2
Query: 215 IRLQNLPWSANALDIRNFFRGLSIPEGGVHIV----GGELGDAFIAF 343
+RL+ LP+ + +I FF+GL I G+ + G G+AF+ F
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRSTGEAFVQF 64
>AF132360-1|AAF68843.1| 346|Homo sapiens hnRNP 2H9 protein.
Length = 346
Score = 32.3 bits (70), Expect = 3.6
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Frame = +2
Query: 215 IRLQNLPWSANALDIRNFFRGLSIPEGGVHIV----GGELGDAFIAF 343
+RL+ LP+ + +I FF+GL I G+ + G G+AF+ F
Sbjct: 18 VRLRGLPFGCSKEEIVQFFQGLEIVPNGITLTMDYQGRSTGEAFVQF 64
>U78027-1|AAB64202.1| 449|Homo sapiens FTP3 protein.
Length = 449
Score = 31.5 bits (68), Expect = 6.3
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +2
Query: 194 ETTMSVIIRLQNLPWSANALDIRNFFRGLSIPEGG----VHIVGGELGDAFIAF 343
+T +RL+ LP+ + +I FF GL I G V G G+AF+ F
Sbjct: 106 DTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQF 159
>L22009-1|AAA91346.1| 449|Homo sapiens hnRNP H protein.
Length = 449
Score = 31.5 bits (68), Expect = 6.3
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +2
Query: 194 ETTMSVIIRLQNLPWSANALDIRNFFRGLSIPEGG----VHIVGGELGDAFIAF 343
+T +RL+ LP+ + +I FF GL I G V G G+AF+ F
Sbjct: 106 DTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQF 159
>CR456778-1|CAG33059.1| 449|Homo sapiens HNRPH1 protein.
Length = 449
Score = 31.5 bits (68), Expect = 6.3
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +2
Query: 194 ETTMSVIIRLQNLPWSANALDIRNFFRGLSIPEGG----VHIVGGELGDAFIAF 343
+T +RL+ LP+ + +I FF GL I G V G G+AF+ F
Sbjct: 106 DTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQF 159
>BC130345-1|AAI30346.1| 449|Homo sapiens heterogeneous nuclear
ribonucleoprotein H2 (H') protein.
Length = 449
Score = 31.5 bits (68), Expect = 6.3
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +2
Query: 194 ETTMSVIIRLQNLPWSANALDIRNFFRGLSIPEGG----VHIVGGELGDAFIAF 343
+T +RL+ LP+ + +I FF GL I G V G G+AF+ F
Sbjct: 106 DTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQF 159
>BC130343-1|AAI30344.1| 449|Homo sapiens heterogeneous nuclear
ribonucleoprotein H2 (H') protein.
Length = 449
Score = 31.5 bits (68), Expect = 6.3
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +2
Query: 194 ETTMSVIIRLQNLPWSANALDIRNFFRGLSIPEGG----VHIVGGELGDAFIAF 343
+T +RL+ LP+ + +I FF GL I G V G G+AF+ F
Sbjct: 106 DTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQF 159
>BC001348-1|AAH01348.1| 449|Homo sapiens HNRPH1 protein protein.
Length = 449
Score = 31.5 bits (68), Expect = 6.3
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +2
Query: 194 ETTMSVIIRLQNLPWSANALDIRNFFRGLSIPEGG----VHIVGGELGDAFIAF 343
+T +RL+ LP+ + +I FF GL I G V G G+AF+ F
Sbjct: 106 DTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQF 159
>AL035422-7|CAB55879.2| 449|Homo sapiens heterogeneous nuclear
ribonucleoprotein H2 (H') protein.
Length = 449
Score = 31.5 bits (68), Expect = 6.3
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = +2
Query: 194 ETTMSVIIRLQNLPWSANALDIRNFFRGLSIPEGG----VHIVGGELGDAFIAF 343
+T +RL+ LP+ + +I FF GL I G V G G+AF+ F
Sbjct: 106 DTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQF 159
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,506,753
Number of Sequences: 237096
Number of extensions: 2097350
Number of successful extensions: 4129
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 2807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3797
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17009285070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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