Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_O08
         (1231 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0862 + 21979932-21980057,21982221-21982289,21982394-21982603     30   3.2  
01_01_0772 - 5999333-5999881,6001105-6001315,6001791-6001858           30   4.3  
01_06_0247 + 27851206-27851255,27851382-27851496,27852280-278524...    29   5.7  
08_02_0432 - 17103230-17103322,17103403-17103542,17104950-171052...    29   9.9  

>08_02_0862 + 21979932-21980057,21982221-21982289,21982394-21982603
          Length = 134

 Score = 30.3 bits (65), Expect = 3.2
 Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = -3

Query: 368 HHIRLGCHQIRLGYHHIRPDYHHIRLDCHHIRLDCHHIRLD-YHQIRPDC 222
           +H+    H++     H+  D++H+  D   +  D   +  D YH  R  C
Sbjct: 71  NHVSRDTHEVSCDICHVSDDFYHVSRDTREVSCDTCQVSDDFYHVSRDTC 120



 Score = 29.5 bits (63), Expect = 5.7
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = -3

Query: 347 HQIRLGYHHIRPDYHHIRLDCHHIRLDCHHIRLDYHQIRPDCHQ 216
           +Q+   ++H+  D H +  D  H+  D +H+  D  ++  D  Q
Sbjct: 64  YQVSDDFNHVSRDTHEVSCDICHVSDDFYHVSRDTREVSCDTCQ 107


>01_01_0772 - 5999333-5999881,6001105-6001315,6001791-6001858
          Length = 275

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 10/51 (19%), Positives = 24/51 (47%)
 Frame = -3

Query: 368 HHIRLGCHQIRLGYHHIRPDYHHIRLDCHHIRLDCHHIRLDYHQIRPDCHQ 216
           +H+    H++      +  D++H+  D   +  D +H+  D  ++  D +Q
Sbjct: 43  NHVSRDTHEVSCDTCRVSDDFYHVSRDTRKVSDDFYHVSRDTCEVSDDTYQ 93


>01_06_0247 +
           27851206-27851255,27851382-27851496,27852280-27852468,
           27853698-27854057,27854138-27854201,27854365-27854504,
           27854610-27854918,27855135-27855389
          Length = 493

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 11/45 (24%), Positives = 23/45 (51%)
 Frame = -3

Query: 347 HQIRLGYHHIRPDYHHIRLDCHHIRLDCHHIRLDYHQIRPDCHQT 213
           +Q+   ++H+  D H +  D  H+  D +H+  D  ++  D  Q+
Sbjct: 75  YQVPDNFNHVSRDTHEVSCDTCHVLDDFYHVSRDTREVSCDTCQS 119



 Score = 28.7 bits (61), Expect = 9.9
 Identities = 8/51 (15%), Positives = 24/51 (47%)
 Frame = -3

Query: 368 HHIRLGCHQIRLGYHHIRPDYHHIRLDCHHIRLDCHHIRLDYHQIRPDCHQ 216
           +H+     ++    + +  +++H+  D H +  D  H+  D++ +  D  +
Sbjct: 61  YHVSRDTREVSCETYQVPDNFNHVSRDTHEVSCDTCHVLDDFYHVSRDTRE 111


>08_02_0432 -
           17103230-17103322,17103403-17103542,17104950-17105211,
           17105391-17105495,17105496-17105558,17106876-17107022
          Length = 269

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 9/51 (17%), Positives = 23/51 (45%)
 Frame = -3

Query: 368 HHIRLGCHQIRLGYHHIRPDYHHIRLDCHHIRLDCHHIRLDYHQIRPDCHQ 216
           +H+     ++      +  D++H+  D H +  D  H+  D++ +  D  +
Sbjct: 55  YHVSRDTREVSCETCQVSDDFNHVLRDTHEVLCDTCHVSGDFYHVSRDTRE 105


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,627,840
Number of Sequences: 37544
Number of extensions: 151993
Number of successful extensions: 338
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 334
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3782886900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)