Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_O05
         (1137 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   1.3  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   7.2  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.6 bits (56), Expect = 1.3
 Identities = 24/79 (30%), Positives = 25/79 (31%), Gaps = 4/79 (5%)
 Frame = -1

Query: 402 GXXPPPPPXXGXXXXXPFF----FXXFFSPFXXFPXNPXXPXFXXXXLFXPPFFXXXXPX 235
           G  PPPPP        P F         +PF  FP NP    F       P       P 
Sbjct: 529 GPPPPPPPGGAVLNIPPQFLPPPLNLLRAPF--FPLNPAQLRFPAGFPNLPNAQPPPAPP 586

Query: 234 PPXFFXFXGPLXPPXGGTP 178
           PP      GP   P  G P
Sbjct: 587 PPPPM---GPPPSPLAGGP 602



 Score = 24.2 bits (50), Expect = 7.2
 Identities = 9/22 (40%), Positives = 9/22 (40%)
 Frame = +2

Query: 422 PXXPXXXPXPXXPPPXXXXXPP 487
           P  P   P P  PPP     PP
Sbjct: 574 PNLPNAQPPPAPPPPPPMGPPP 595


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 24.2 bits (50), Expect = 7.2
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = +2

Query: 293  GXXGXXGNXXKGEKKX*KKKGXXXXXPXXGGGG 391
            G  G  G    G  K  K+KG        GGGG
Sbjct: 921  GGGGSGGEEGSGAPKERKRKGEKKPRKSQGGGG 953


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.312    0.150    0.521 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,735
Number of Sequences: 2352
Number of extensions: 2501
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 127529064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)