Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_N24
         (1124 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0556 + 23236156-23236364,23236623-23236689,23236903-232371...    77   3e-14

>01_05_0556 +
           23236156-23236364,23236623-23236689,23236903-23237108,
           23237284-23237510,23237865-23237926
          Length = 256

 Score = 77.0 bits (181), Expect = 3e-14
 Identities = 42/132 (31%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
 Frame = +3

Query: 297 MYLSLSLLVAIMQDLTGSTRTLDHLFEYHELHIVDN--EGRAVILAFVFNAVIGAFALWM 470
           +YL   +L A + D       + H + + +   +    E  +++  F  +    AF L+ 
Sbjct: 109 LYLHFLILPAFITDRRIYYPHITHYYTFGDYCNLRGPVENNSLLPNFFMHFNSAAFMLY- 167

Query: 471 IVGRTKLCLDFSCTYHGLHLIACWYYNGSFPTTFSWWTLNVACGAIMCVAGEFLCLRTEL 650
           ++ R K CLDF+ T + +HL  C  Y G +P + +WW +N+A  AIM + GE+LC+R EL
Sbjct: 168 VIERAKKCLDFAATLYIIHLFICIVYGG-WPASVTWWVVNIAGLAIMSLLGEYLCIRREL 226

Query: 651 QAIPLXNIXAKV 686
           + IP+  + A V
Sbjct: 227 KEIPISRLRASV 238



 Score = 52.4 bits (120), Expect = 6e-07
 Identities = 29/72 (40%), Positives = 40/72 (55%)
 Frame = +3

Query: 249 WDPCLIISQIVAMQSVMYLSLSLLVAIMQDLTGSTRTLDHLFEYHELHIVDNEGRAVILA 428
           WDP LI+SQIV +Q + YL+L LL+A++        TL +LF++  L      G  VI A
Sbjct: 3   WDPWLIVSQIVCLQCLYYLALGLLMALLVGTRVPRLTLLYLFDFATLTPRTTTGWCVIAA 62

Query: 429 FVFNAVIGAFAL 464
           F+  A  G   L
Sbjct: 63  FLLAAAAGYICL 74


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,293,916
Number of Sequences: 37544
Number of extensions: 353545
Number of successful extensions: 780
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3398064036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)