Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_N24
(1124 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC048286-1|AAH48286.1| 156|Homo sapiens SYS1 Golgi-localized in... 144 5e-34
AL591714-1|CAC39448.1| 194|Homo sapiens hypothetical protein pr... 144 5e-34
AL021578-9|CAI21082.1| 156|Homo sapiens chromosome 20 open read... 144 5e-34
AK075264-1|BAC11506.1| 156|Homo sapiens protein ( Homo sapiens ... 144 5e-34
AL021578-8|CAI21081.1| 118|Homo sapiens chromosome 20 open read... 102 2e-21
AL021578-11|CAI21084.1| 102|Homo sapiens chromosome 20 open rea... 100 1e-20
AL021578-10|CAI21083.1| 97|Homo sapiens chromosome 20 open rea... 78 5e-14
>BC048286-1|AAH48286.1| 156|Homo sapiens SYS1 Golgi-localized
integral membrane protein homolog (S. cerevisiae)
protein.
Length = 156
Score = 144 bits (349), Expect = 5e-34
Identities = 65/147 (44%), Positives = 92/147 (62%)
Frame = +3
Query: 225 SGSFRYTQWDPCLIISQIVAMQSVMYLSLSLLVAIMQDLTGSTRTLDHLFEYHELHIVDN 404
+G FR WDP LI+SQIV MQ+V Y SL L +A++ L S+ +LD +F+ L
Sbjct: 2 AGQFRSYVWDPLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTP 61
Query: 405 EGRAVILAFVFNAVIGAFALWMIVGRTKLCLDFSCTYHGLHLIACWYYNGSFPTTFSWWT 584
GR +++F+ NA+ A L + R K CLDF+ T H HL+ CW+Y+ FP+ +WW
Sbjct: 62 PGRLSMMSFILNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALTWWL 121
Query: 585 LNVACGAIMCVAGEFLCLRTELQAIPL 665
+ C A+M V GE+LC+RTEL+ IPL
Sbjct: 122 VQAVCIALMAVIGEYLCMRTELKEIPL 148
>AL591714-1|CAC39448.1| 194|Homo sapiens hypothetical protein
protein.
Length = 194
Score = 144 bits (349), Expect = 5e-34
Identities = 65/147 (44%), Positives = 92/147 (62%)
Frame = +3
Query: 225 SGSFRYTQWDPCLIISQIVAMQSVMYLSLSLLVAIMQDLTGSTRTLDHLFEYHELHIVDN 404
+G FR WDP LI+SQIV MQ+V Y SL L +A++ L S+ +LD +F+ L
Sbjct: 40 AGQFRSYVWDPLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTP 99
Query: 405 EGRAVILAFVFNAVIGAFALWMIVGRTKLCLDFSCTYHGLHLIACWYYNGSFPTTFSWWT 584
GR +++F+ NA+ A L + R K CLDF+ T H HL+ CW+Y+ FP+ +WW
Sbjct: 100 PGRLSMMSFILNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALTWWL 159
Query: 585 LNVACGAIMCVAGEFLCLRTELQAIPL 665
+ C A+M V GE+LC+RTEL+ IPL
Sbjct: 160 VQAVCIALMAVIGEYLCMRTELKEIPL 186
>AL021578-9|CAI21082.1| 156|Homo sapiens chromosome 20 open reading
frame 169 protein.
Length = 156
Score = 144 bits (349), Expect = 5e-34
Identities = 65/147 (44%), Positives = 92/147 (62%)
Frame = +3
Query: 225 SGSFRYTQWDPCLIISQIVAMQSVMYLSLSLLVAIMQDLTGSTRTLDHLFEYHELHIVDN 404
+G FR WDP LI+SQIV MQ+V Y SL L +A++ L S+ +LD +F+ L
Sbjct: 2 AGQFRSYVWDPLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTP 61
Query: 405 EGRAVILAFVFNAVIGAFALWMIVGRTKLCLDFSCTYHGLHLIACWYYNGSFPTTFSWWT 584
GR +++F+ NA+ A L + R K CLDF+ T H HL+ CW+Y+ FP+ +WW
Sbjct: 62 PGRLSMMSFILNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALTWWL 121
Query: 585 LNVACGAIMCVAGEFLCLRTELQAIPL 665
+ C A+M V GE+LC+RTEL+ IPL
Sbjct: 122 VQAVCIALMAVIGEYLCMRTELKEIPL 148
>AK075264-1|BAC11506.1| 156|Homo sapiens protein ( Homo sapiens
cDNA FLJ90783 fis, clone THYRO1001327. ).
Length = 156
Score = 144 bits (349), Expect = 5e-34
Identities = 65/147 (44%), Positives = 92/147 (62%)
Frame = +3
Query: 225 SGSFRYTQWDPCLIISQIVAMQSVMYLSLSLLVAIMQDLTGSTRTLDHLFEYHELHIVDN 404
+G FR WDP LI+SQIV MQ+V Y SL L +A++ L S+ +LD +F+ L
Sbjct: 2 AGQFRSYVWDPLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTP 61
Query: 405 EGRAVILAFVFNAVIGAFALWMIVGRTKLCLDFSCTYHGLHLIACWYYNGSFPTTFSWWT 584
GR +++F+ NA+ A L + R K CLDF+ T H HL+ CW+Y+ FP+ +WW
Sbjct: 62 PGRLSMMSFILNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALTWWL 121
Query: 585 LNVACGAIMCVAGEFLCLRTELQAIPL 665
+ C A+M V GE+LC+RTEL+ IPL
Sbjct: 122 VQAVCIALMAVIGEYLCMRTELKEIPL 148
>AL021578-8|CAI21081.1| 118|Homo sapiens chromosome 20 open reading
frame 169 protein.
Length = 118
Score = 102 bits (245), Expect = 2e-21
Identities = 48/117 (41%), Positives = 70/117 (59%)
Frame = +3
Query: 225 SGSFRYTQWDPCLIISQIVAMQSVMYLSLSLLVAIMQDLTGSTRTLDHLFEYHELHIVDN 404
+G FR WDP LI+SQIV MQ+V Y SL L +A++ L S+ +LD +F+ L
Sbjct: 2 AGQFRSYVWDPLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTP 61
Query: 405 EGRAVILAFVFNAVIGAFALWMIVGRTKLCLDFSCTYHGLHLIACWYYNGSFPTTFS 575
GR +++F+ NA+ A L + R K CLDF+ T H HL+ CW+Y+ FP+ +
Sbjct: 62 PGRLSMMSFILNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALT 118
>AL021578-11|CAI21084.1| 102|Homo sapiens chromosome 20 open
reading frame 169 protein.
Length = 102
Score = 100 bits (239), Expect = 1e-20
Identities = 40/90 (44%), Positives = 57/90 (63%)
Frame = +3
Query: 396 VDNEGRAVILAFVFNAVIGAFALWMIVGRTKLCLDFSCTYHGLHLIACWYYNGSFPTTFS 575
V GR +++F+ NA+ A L + R K CLDF+ T H HL+ CW+Y+ FP+ +
Sbjct: 5 VRRRGRLSMMSFILNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALT 64
Query: 576 WWTLNVACGAIMCVAGEFLCLRTELQAIPL 665
WW + C A+M V GE+LC+RTEL+ IPL
Sbjct: 65 WWLVQAVCIALMAVIGEYLCMRTELKEIPL 94
>AL021578-10|CAI21083.1| 97|Homo sapiens chromosome 20 open
reading frame 169 protein.
Length = 97
Score = 78.2 bits (184), Expect = 5e-14
Identities = 36/97 (37%), Positives = 56/97 (57%)
Frame = +3
Query: 285 MQSVMYLSLSLLVAIMQDLTGSTRTLDHLFEYHELHIVDNEGRAVILAFVFNAVIGAFAL 464
MQ+V Y SL L +A++ L S+ +LD +F+ L GR +++F+ NA+ A L
Sbjct: 1 MQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFSTPPGRLSMMSFILNALTCALGL 60
Query: 465 WMIVGRTKLCLDFSCTYHGLHLIACWYYNGSFPTTFS 575
+ R K CLDF+ T H HL+ CW+Y+ FP+ +
Sbjct: 61 LYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALT 97
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,070,776
Number of Sequences: 237096
Number of extensions: 2024005
Number of successful extensions: 7009
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7009
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 15645181258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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