Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_N24
         (1124 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071479-1|AAL49101.1|  160|Drosophila melanogaster RE55080p pro...   205   1e-52
AE014297-777|AAF54261.1|  160|Drosophila melanogaster CG11753-PA...   205   1e-52
AE014296-452|AAS64937.1| 1851|Drosophila melanogaster CG32306-PD...    35   0.18 
AE014296-451|AAF47644.2| 2197|Drosophila melanogaster CG32306-PB...    35   0.18 
Z47722-1|CAA87654.1|  796|Drosophila melanogaster MBN protein.         30   6.7  
AE014296-1070|AAN12238.2|  653|Drosophila melanogaster CG12755-P...    30   6.7  

>AY071479-1|AAL49101.1|  160|Drosophila melanogaster RE55080p
           protein.
          Length = 160

 Score =  205 bits (500), Expect = 1e-52
 Identities = 89/146 (60%), Positives = 108/146 (73%)
 Frame = +3

Query: 228 GSFRYTQWDPCLIISQIVAMQSVMYLSLSLLVAIMQDLTGSTRTLDHLFEYHELHIVDNE 407
           G+FR TQWDP L+ SQIV+MQ  +Y +L LLV +   L+G   +LDHLFEYHE+HI D  
Sbjct: 4   GTFRNTQWDPTLLSSQIVSMQFCVYFTLGLLVFVANKLSGDNYSLDHLFEYHEIHIYDMG 63

Query: 408 GRAVILAFVFNAVIGAFALWMIVGRTKLCLDFSCTYHGLHLIACWYYNGSFPTTFSWWTL 587
           GR VI AFV NA + + ALW IV R KLCLDFSCT+H LHL+ CW+YN SFP   SWW L
Sbjct: 64  GRLVICAFVLNAFLASLALWCIVRRAKLCLDFSCTFHVLHLLICWWYNRSFPANASWWLL 123

Query: 588 NVACGAIMCVAGEFLCLRTELQAIPL 665
           NV  G IMC+ GEFLCL+TE++ IP+
Sbjct: 124 NVITGTIMCIGGEFLCLQTEMKEIPV 149


>AE014297-777|AAF54261.1|  160|Drosophila melanogaster CG11753-PA
           protein.
          Length = 160

 Score =  205 bits (500), Expect = 1e-52
 Identities = 89/146 (60%), Positives = 108/146 (73%)
 Frame = +3

Query: 228 GSFRYTQWDPCLIISQIVAMQSVMYLSLSLLVAIMQDLTGSTRTLDHLFEYHELHIVDNE 407
           G+FR TQWDP L+ SQIV+MQ  +Y +L LLV +   L+G   +LDHLFEYHE+HI D  
Sbjct: 4   GTFRNTQWDPTLLSSQIVSMQFCVYFTLGLLVFVANKLSGDNYSLDHLFEYHEIHIYDMG 63

Query: 408 GRAVILAFVFNAVIGAFALWMIVGRTKLCLDFSCTYHGLHLIACWYYNGSFPTTFSWWTL 587
           GR VI AFV NA + + ALW IV R KLCLDFSCT+H LHL+ CW+YN SFP   SWW L
Sbjct: 64  GRLVICAFVLNAFLASLALWCIVRRAKLCLDFSCTFHVLHLLICWWYNRSFPANASWWLL 123

Query: 588 NVACGAIMCVAGEFLCLRTELQAIPL 665
           NV  G IMC+ GEFLCL+TE++ IP+
Sbjct: 124 NVITGTIMCIGGEFLCLQTEMKEIPV 149


>AE014296-452|AAS64937.1| 1851|Drosophila melanogaster CG32306-PD,
           isoform D protein.
          Length = 1851

 Score = 35.1 bits (77), Expect = 0.18
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = -2

Query: 502 KSKHSLVRPTIIHNAKAPMTALKTNASITALPSLSTMCSS 383
           K +H+   P + +  KAP+  LKT AS  ALPS++   +S
Sbjct: 375 KQQHATPMPPLANANKAPLIVLKTAASAAALPSIAAAATS 414


>AE014296-451|AAF47644.2| 2197|Drosophila melanogaster CG32306-PB,
           isoform B protein.
          Length = 2197

 Score = 35.1 bits (77), Expect = 0.18
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = -2

Query: 502 KSKHSLVRPTIIHNAKAPMTALKTNASITALPSLSTMCSS 383
           K +H+   P + +  KAP+  LKT AS  ALPS++   +S
Sbjct: 721 KQQHATPMPPLANANKAPLIVLKTAASAAALPSIAAAATS 760


>Z47722-1|CAA87654.1|  796|Drosophila melanogaster MBN protein.
          Length = 796

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = -3

Query: 660 VSLATQSSGTRTRPPHTL*PHR--LRSTSTTRKLWG 559
           VS A   + T+TRPPHT  PH+  L S++T   + G
Sbjct: 520 VSSAKTLANTKTRPPHTFNPHQTPLLSSATAPGISG 555


>AE014296-1070|AAN12238.2|  653|Drosophila melanogaster CG12755-PB,
           isoform B protein.
          Length = 653

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = -3

Query: 660 VSLATQSSGTRTRPPHTL*PHR--LRSTSTTRKLWG 559
           VS A   + T+TRPPHT  PH+  L S++T   + G
Sbjct: 377 VSSAKTLANTKTRPPHTFNPHQTPLLSSATAPGISG 412


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,606,725
Number of Sequences: 53049
Number of extensions: 616108
Number of successful extensions: 1579
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1579
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5882732352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)