BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_N23
(1135 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 25 5.4
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 24 7.2
AY081778-1|AAL91655.1| 507|Anopheles gambiae cytochrome P450 pr... 24 9.5
AJ010195-1|CAA09034.1| 687|Anopheles gambiae prophenoloxidase p... 24 9.5
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 24.6 bits (51), Expect = 5.4
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 689 FFPIHFKSLMNEGPKNARSNVY 754
FF HF L EG K R+N Y
Sbjct: 2 FFVCHFHELQEEGWKLNRTNYY 23
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 24.2 bits (50), Expect = 7.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 822 INRWRTIQKYIPKFPNQFH 766
+N WR IQK++ N++H
Sbjct: 1627 LNHWRLIQKHMQHIWNRWH 1645
>AY081778-1|AAL91655.1| 507|Anopheles gambiae cytochrome P450
protein.
Length = 507
Score = 23.8 bits (49), Expect = 9.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 730 EERSLKRL*FLNVELIWEFRN 792
E+ K ++N EL WEF+N
Sbjct: 49 EQFQSKHASYINEELYWEFKN 69
>AJ010195-1|CAA09034.1| 687|Anopheles gambiae prophenoloxidase
protein.
Length = 687
Score = 23.8 bits (49), Expect = 9.5
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 586 DRFKTYASSRVSNSSRNFYQRSIVLRNKRTTNVLFLSN 699
D+F+ + V+N R Q S+ + +RT + LSN
Sbjct: 532 DKFRVNLTPGVNNIVRRSEQSSVTIPYERTFRPMALSN 569
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 923,589
Number of Sequences: 2352
Number of extensions: 17866
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 127120317
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -