Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_N20
(1279 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.081
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.081
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.081
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 9.3
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 9.3
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 9.3
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 9.3
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 9.3
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.5 bits (78), Expect = 0.081
Identities = 22/75 (29%), Positives = 22/75 (29%)
Frame = +1
Query: 1015 GPXXPXHPGXXXXXXXXXXXTPPPXXXXXXXXXXGXPPXXGXXXPXXAPXXXXXXXPPPT 1194
GP P PG PPP G PP G P P PPP
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPG---------GLPPISGGPPPPPPPPGGCPPPPPPP 775
Query: 1195 PPXXXXXXXXPPXXP 1239
PP PP P
Sbjct: 776 PPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.5 bits (78), Expect = 0.081
Identities = 22/75 (29%), Positives = 22/75 (29%)
Frame = +1
Query: 1015 GPXXPXHPGXXXXXXXXXXXTPPPXXXXXXXXXXGXPPXXGXXXPXXAPXXXXXXXPPPT 1194
GP P PG PPP G PP G P P PPP
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPG---------GLPPISGGPPPPPPPPGGCPPPPPPP 775
Query: 1195 PPXXXXXXXXPPXXP 1239
PP PP P
Sbjct: 776 PPGGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.5 bits (78), Expect = 0.081
Identities = 22/75 (29%), Positives = 22/75 (29%)
Frame = +1
Query: 1015 GPXXPXHPGXXXXXXXXXXXTPPPXXXXXXXXXXGXPPXXGXXXPXXAPXXXXXXXPPPT 1194
GP P PG PPP G PP G P P PPP
Sbjct: 308 GPPPPPPPGGLPPITGGPPPPPPPG---------GLPPISGGPPPPPPPPGGCPPPPPPP 358
Query: 1195 PPXXXXXXXXPPXXP 1239
PP PP P
Sbjct: 359 PPGGFKGGPPPPPPP 373
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical protein
F15B9.4 protein.
Length = 1140
Score = 28.7 bits (61), Expect = 9.3
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +1
Query: 1078 PPPXXXXXXXXXXGXPPXXGXXXPXXAPXXXXXXXPPPTPPXXXXXXXXPPXXP 1239
PPP PP P AP PPP PP PP P
Sbjct: 505 PPPPLLGIAPMSTNAPPPP--PMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPP 556
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 9.3
Identities = 32/139 (23%), Positives = 34/139 (24%)
Frame = -1
Query: 1261 GXXXGGXXGXXXGXXXXXXXGGGLXGGXXXGXXXXPXXGXXXPXAGGXXXFXXXXXXXGG 1082
G GG G G GGG GG G G GG G
Sbjct: 128 GGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSG 187
Query: 1081 VGXXXGXXXXXXXGXGVXXXXGPWXGXXGXXXXXXXLPWXXPVXGXXXAAPAWGRGXXGX 902
G G G V G G G + G A + G G G
Sbjct: 188 GGGCGGGGSSGGGGYAVAPSGGGGCGGGGSSGGGG---YASAPSGGGGYATSGGGGSGGY 244
Query: 901 XXXGXPGXGXXXVXXXGXG 845
G G G G G
Sbjct: 245 ATGGSSGGGYSSGGSSGGG 263
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 9.3
Identities = 32/139 (23%), Positives = 34/139 (24%)
Frame = -1
Query: 1261 GXXXGGXXGXXXGXXXXXXXGGGLXGGXXXGXXXXPXXGXXXPXAGGXXXFXXXXXXXGG 1082
G GG G G GGG GG G G GG G
Sbjct: 128 GGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSG 187
Query: 1081 VGXXXGXXXXXXXGXGVXXXXGPWXGXXGXXXXXXXLPWXXPVXGXXXAAPAWGRGXXGX 902
G G G V G G G + G A + G G G
Sbjct: 188 GGGCGGGGSSGGGGYAVAPSGGGGCGGGGSSGGGG---YASAPSGGGGYATSGGGGSGGY 244
Query: 901 XXXGXPGXGXXXVXXXGXG 845
G G G G G
Sbjct: 245 ATGGSSGGGYSSGGSSGGG 263
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.7 bits (61), Expect = 9.3
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -1
Query: 967 WXXPVXGXXXAAPAWGRGXXGXXXXGXPGXGXXXVXXXGXGXWSPRXG 824
W P G P WGRG G G G G G G W G
Sbjct: 43 WGRP--GWGGGGPGWGRGGGGSGWGGGRGGGWG--NNGGGGNWGGNGG 86
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 28.7 bits (61), Expect = 9.3
Identities = 23/89 (25%), Positives = 25/89 (28%)
Frame = -1
Query: 1261 GXXXGGXXGXXXGXXXXXXXGGGLXGGXXXGXXXXPXXGXXXPXAGGXXXFXXXXXXXGG 1082
G GG G G GGG GG G G GG + GG
Sbjct: 134 GGGYGGMGGGPGGYGMGGYGGGG-GGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGG 192
Query: 1081 VGXXXGXXXXXXXGXGVXXXXGPWXGXXG 995
+G G G G G G G
Sbjct: 193 MGGYGGGMGGGGYGGGGMGGGGYGGGGDG 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,449,285
Number of Sequences: 27780
Number of extensions: 180408
Number of successful extensions: 691
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3568584636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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