Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_N17
(1226 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00043-5|AAN65292.1| 505|Caenorhabditis elegans Hypothetical pr... 179 4e-45
U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical pr... 179 4e-45
U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical p... 118 6e-27
U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical p... 118 6e-27
Z50070-6|CAA90395.1| 548|Caenorhabditis elegans Hypothetical pr... 105 8e-23
U70849-6|ABD63227.1| 284|Caenorhabditis elegans Phosphatidylser... 32 0.72
U70849-5|AAF99922.2| 400|Caenorhabditis elegans Phosphatidylser... 32 0.72
Z72512-8|CAH04717.1| 583|Caenorhabditis elegans Hypothetical pr... 29 6.7
Z72512-7|CAA96668.3| 568|Caenorhabditis elegans Hypothetical pr... 29 6.7
>U00043-5|AAN65292.1| 505|Caenorhabditis elegans Hypothetical
protein T26A5.5b protein.
Length = 505
Score = 179 bits (435), Expect = 4e-45
Identities = 87/194 (44%), Positives = 126/194 (64%), Gaps = 9/194 (4%)
Frame = +3
Query: 351 LTVTYLQKNGFTTPLLFK-EKTGLGLRVPTSNFTVNDVRMCVGSRRILDVMDVNTQKNIE 527
L + + KNG P+ F+ + +G+ +P+ +F+V+DV VG R+++V+ V Q +++
Sbjct: 6 LNLEFYDKNGLDNPIHFRCDPKRIGMTLPSPDFSVDDVLELVGGNRMIEVVQVQNQGSVK 65
Query: 528 MTMKDWQRYYDDPNKER--LLNVISLEFSHTRLENYVQAPRIVRLIDWVDTVWPRHLKDQ 701
M+++++ +Y P ++R L NV+SLEFS T LE+ V++P +VR IDWV WP L+ Q
Sbjct: 66 MSLQEFINFYKTPQEKREVLYNVLSLEFSQTPLEDLVKSPELVRQIDWVGNQWPDALR-Q 124
Query: 702 QTESTNALDDMMY------PKVXKYCLMSVKGCYTDFHIDFGGTSVWYHILRGAKVFGLI 863
+ S N D Y PKV YCLMSV CYTDFHIDF GTSVWYH+L+G KVF LI
Sbjct: 125 RWISFNGRDKKFYNPHHTFPKVQNYCLMSVANCYTDFHIDFSGTSVWYHVLKGRKVFWLI 184
Query: 864 PPTEKNLXXYXKWV 905
PPTE N Y +++
Sbjct: 185 PPTETNFFIYQEFI 198
>U00043-4|AAN65291.1| 1076|Caenorhabditis elegans Hypothetical
protein T26A5.5a protein.
Length = 1076
Score = 179 bits (435), Expect = 4e-45
Identities = 87/194 (44%), Positives = 126/194 (64%), Gaps = 9/194 (4%)
Frame = +3
Query: 351 LTVTYLQKNGFTTPLLFK-EKTGLGLRVPTSNFTVNDVRMCVGSRRILDVMDVNTQKNIE 527
L + + KNG P+ F+ + +G+ +P+ +F+V+DV VG R+++V+ V Q +++
Sbjct: 6 LNLEFYDKNGLDNPIHFRCDPKRIGMTLPSPDFSVDDVLELVGGNRMIEVVQVQNQGSVK 65
Query: 528 MTMKDWQRYYDDPNKER--LLNVISLEFSHTRLENYVQAPRIVRLIDWVDTVWPRHLKDQ 701
M+++++ +Y P ++R L NV+SLEFS T LE+ V++P +VR IDWV WP L+ Q
Sbjct: 66 MSLQEFINFYKTPQEKREVLYNVLSLEFSQTPLEDLVKSPELVRQIDWVGNQWPDALR-Q 124
Query: 702 QTESTNALDDMMY------PKVXKYCLMSVKGCYTDFHIDFGGTSVWYHILRGAKVFGLI 863
+ S N D Y PKV YCLMSV CYTDFHIDF GTSVWYH+L+G KVF LI
Sbjct: 125 RWISFNGRDKKFYNPHHTFPKVQNYCLMSVANCYTDFHIDFSGTSVWYHVLKGRKVFWLI 184
Query: 864 PPTEKNLXXYXKWV 905
PPTE N Y +++
Sbjct: 185 PPTETNFFIYQEFI 198
>U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical
protein F29B9.2b protein.
Length = 897
Score = 118 bits (285), Expect = 6e-27
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 7/173 (4%)
Frame = +3
Query: 396 LFKEKTGLGLRVPTSNFTVNDVRMCVGSRRILDVMDVNTQKNIEMTMKDWQRYY-DDPNK 572
+ K+ GL + +P F + DV +GS +D +DV Q M + +++ + D N+
Sbjct: 357 MVKDMDGLNMTMPKPGFDLEDVVKIMGSDYEVDTIDVYNQSTYSMKLDTFRKLFRDTKNR 416
Query: 573 ERLLNVISLEFS-HTRLENYVQAPRIVRLIDWVDTVWP-----RHLKDQQTESTNALDDM 734
L N +SLEFS + ++ + PR V+ I V+ +WP ++K Q E L +
Sbjct: 417 PLLYNFLSLEFSDNNEMKEIAKPPRFVQEISMVNRLWPDVSGAEYIKLLQREEY--LPED 474
Query: 735 MYPKVXKYCLMSVKGCYTDFHIDFGGTSVWYHILRGAKVFGLIPPTEKNLXXY 893
PKV ++CL + G YTDFH+DFGG+SV+YHIL+G K+F + PTE+N Y
Sbjct: 475 QRPKVEQFCLAGMAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAY 527
>U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical
protein F29B9.2a protein.
Length = 910
Score = 118 bits (285), Expect = 6e-27
Identities = 63/173 (36%), Positives = 98/173 (56%), Gaps = 7/173 (4%)
Frame = +3
Query: 396 LFKEKTGLGLRVPTSNFTVNDVRMCVGSRRILDVMDVNTQKNIEMTMKDWQRYY-DDPNK 572
+ K+ GL + +P F + DV +GS +D +DV Q M + +++ + D N+
Sbjct: 370 MVKDMDGLNMTMPKPGFDLEDVVKIMGSDYEVDTIDVYNQSTYSMKLDTFRKLFRDTKNR 429
Query: 573 ERLLNVISLEFS-HTRLENYVQAPRIVRLIDWVDTVWP-----RHLKDQQTESTNALDDM 734
L N +SLEFS + ++ + PR V+ I V+ +WP ++K Q E L +
Sbjct: 430 PLLYNFLSLEFSDNNEMKEIAKPPRFVQEISMVNRLWPDVSGAEYIKLLQREEY--LPED 487
Query: 735 MYPKVXKYCLMSVKGCYTDFHIDFGGTSVWYHILRGAKVFGLIPPTEKNLXXY 893
PKV ++CL + G YTDFH+DFGG+SV+YHIL+G K+F + PTE+N Y
Sbjct: 488 QRPKVEQFCLAGMAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAY 540
>Z50070-6|CAA90395.1| 548|Caenorhabditis elegans Hypothetical
protein F43G6.6 protein.
Length = 548
Score = 105 bits (251), Expect = 8e-23
Identities = 56/169 (33%), Positives = 91/169 (53%), Gaps = 3/169 (1%)
Frame = +3
Query: 396 LFKEKTGLGLRVPTSNFTVNDVRMCVGSRRILDVMDVNTQKNIEMTMKDWQRYY-DDP-N 569
+ K GL +++P F + D+ +GS +D +DV Q+ M + ++ + ++P N
Sbjct: 152 IVKNMDGLDMKMPKPGFDLEDLVRILGSDYAVDTIDVFNQETYLMKLDTIRKLFRENPEN 211
Query: 570 KERLLNVISLEFS-HTRLENYVQAPRIVRLIDWVDTVWPRHLKDQQTESTNALDDMMYPK 746
+ L N + LEFS H L+ + PR V+ I +W S +AL D PK
Sbjct: 212 RTLLYNFLFLEFSDHPELKEMARPPRFVQDISMAKRLW------SDVTSKSALSDDHRPK 265
Query: 747 VXKYCLMSVKGCYTDFHIDFGGTSVWYHILRGAKVFGLIPPTEKNLXXY 893
+ + C ++ YTDFH+DFGGTSV++H+ +G K+F + PTE+N Y
Sbjct: 266 IEQICAAAMANSYTDFHVDFGGTSVYFHVFKGEKIFYIAAPTEENFVMY 314
>U70849-6|ABD63227.1| 284|Caenorhabditis elegans Phosphatidylserine
receptor familyprotein 1, isoform b protein.
Length = 284
Score = 32.3 bits (70), Expect = 0.72
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 726 DDMMYPKVXKYCLMSVKGCYTDFHIDFGGTSVWYHILRGAKVFGLIPP 869
DD P ++ +M T HID GTS W +L+G K + LIPP
Sbjct: 54 DDKKRPP-HRWFVMGPARSGTAIHIDPLGTSAWNSLLQGHKRWVLIPP 100
>U70849-5|AAF99922.2| 400|Caenorhabditis elegans Phosphatidylserine
receptor familyprotein 1, isoform a protein.
Length = 400
Score = 32.3 bits (70), Expect = 0.72
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 726 DDMMYPKVXKYCLMSVKGCYTDFHIDFGGTSVWYHILRGAKVFGLIPP 869
DD P ++ +M T HID GTS W +L+G K + LIPP
Sbjct: 170 DDKKRPP-HRWFVMGPARSGTAIHIDPLGTSAWNSLLQGHKRWVLIPP 216
>Z72512-8|CAH04717.1| 583|Caenorhabditis elegans Hypothetical
protein R07B5.8b protein.
Length = 583
Score = 29.1 bits (62), Expect = 6.7
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 669 RPNLSGVQYAELARSSRGECAKTPERL 589
R S Q +E+ RSS+GE A+ PER+
Sbjct: 145 RNEFSPAQISEIYRSSKGEQARLPERI 171
>Z72512-7|CAA96668.3| 568|Caenorhabditis elegans Hypothetical
protein R07B5.8a protein.
Length = 568
Score = 29.1 bits (62), Expect = 6.7
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 669 RPNLSGVQYAELARSSRGECAKTPERL 589
R S Q +E+ RSS+GE A+ PER+
Sbjct: 190 RNEFSPAQISEIYRSSKGEQARLPERI 216
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,533,687
Number of Sequences: 27780
Number of extensions: 468727
Number of successful extensions: 1350
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1345
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3391198850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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