Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_N16
(1183 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 416 e-116
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 416 e-116
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 416 e-116
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 416 e-116
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 279 4e-75
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 279 4e-75
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 190 2e-48
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 190 2e-48
AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical ... 30 2.8
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 29 6.4
U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical pr... 29 8.5
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein L3
protein.
Length = 401
Score = 416 bits (1024), Expect = e-116
Identities = 201/345 (58%), Positives = 241/345 (69%), Gaps = 1/345 (0%)
Frame = +3
Query: 81 FXHPVMGLWDSIPKRGPXXXXXXXXXXXKTTLANLXHLTAFIGYKAGMTHVVREPDRPGS 260
F P G PK+ K + HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 261 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 440
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 441 XXXXXXXXXXRWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 620
+WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 621 NGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTH 800
NGGTIE KV WAREHLEK + VD+VFAQDEMID I SRWHTKKLPRKTH
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 245
Query: 801 KGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNAST 980
KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++G KNN ST
Sbjct: 246 KGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGST 302
Query: 981 EYDLSEKSITPMXGSP-IMVX*XRXXDXQGLXXGT*XXFITLKKS 1112
E+DL++K+ITPM G P + +G G ITL+KS
Sbjct: 303 EFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKS 347
Score = 77.0 bits (181), Expect = 2e-14
Identities = 33/46 (71%), Positives = 36/46 (78%)
Frame = +2
Query: 65 MSHRKFSXPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPXSFDCF 202
MSHRKFS PRHG MGF PKKRSR +RG++KAFPKDD SKP F
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAF 46
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein L3
protein.
Length = 401
Score = 416 bits (1024), Expect = e-116
Identities = 201/345 (58%), Positives = 241/345 (69%), Gaps = 1/345 (0%)
Frame = +3
Query: 81 FXHPVMGLWDSIPKRGPXXXXXXXXXXXKTTLANLXHLTAFIGYKAGMTHVVREPDRPGS 260
F P G PK+ K + HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 261 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 440
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 441 XXXXXXXXXXRWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 620
+WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 621 NGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTH 800
NGGTIE KV WAREHLEK + VD+VFAQDEMID I SRWHTKKLPRKTH
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 245
Query: 801 KGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNAST 980
KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++G KNN ST
Sbjct: 246 KGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGST 302
Query: 981 EYDLSEKSITPMXGSP-IMVX*XRXXDXQGLXXGT*XXFITLKKS 1112
E+DL++K+ITPM G P + +G G ITL+KS
Sbjct: 303 EFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKS 347
Score = 77.0 bits (181), Expect = 2e-14
Identities = 33/46 (71%), Positives = 36/46 (78%)
Frame = +2
Query: 65 MSHRKFSXPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPXSFDCF 202
MSHRKFS PRHG MGF PKKRSR +RG++KAFPKDD SKP F
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAF 46
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 416 bits (1024), Expect = e-116
Identities = 201/345 (58%), Positives = 241/345 (69%), Gaps = 1/345 (0%)
Frame = +3
Query: 81 FXHPVMGLWDSIPKRGPXXXXXXXXXXXKTTLANLXHLTAFIGYKAGMTHVVREPDRPGS 260
F P G PK+ K + HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 261 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 440
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 441 XXXXXXXXXXRWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 620
+WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 621 NGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTH 800
NGGTIE KV WAREHLEK + VD+VFAQDEMID I SRWHTKKLPRKTH
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 245
Query: 801 KGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNAST 980
KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++G KNN ST
Sbjct: 246 KGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGST 302
Query: 981 EYDLSEKSITPMXGSP-IMVX*XRXXDXQGLXXGT*XXFITLKKS 1112
E+DL++K+ITPM G P + +G G ITL+KS
Sbjct: 303 EFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKS 347
Score = 77.0 bits (181), Expect = 2e-14
Identities = 33/46 (71%), Positives = 36/46 (78%)
Frame = +2
Query: 65 MSHRKFSXPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPXSFDCF 202
MSHRKFS PRHG MGF PKKRSR +RG++KAFPKDD SKP F
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAF 46
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical protein
F13B10.2a protein.
Length = 401
Score = 416 bits (1024), Expect = e-116
Identities = 201/345 (58%), Positives = 241/345 (69%), Gaps = 1/345 (0%)
Frame = +3
Query: 81 FXHPVMGLWDSIPKRGPXXXXXXXXXXXKTTLANLXHLTAFIGYKAGMTHVVREPDRPGS 260
F P G PK+ K + HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 261 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 440
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 441 XXXXXXXXXXRWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 620
+WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQV 185
Query: 621 NGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTH 800
NGGTIE KV WAREHLEK + VD+VFAQDEMID I SRWHTKKLPRKTH
Sbjct: 186 NGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTH 245
Query: 801 KGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNAST 980
KGLRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++G KNN ST
Sbjct: 246 KGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGST 302
Query: 981 EYDLSEKSITPMXGSP-IMVX*XRXXDXQGLXXGT*XXFITLKKS 1112
E+DL++K+ITPM G P + +G G ITL+KS
Sbjct: 303 EFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKS 347
Score = 77.0 bits (181), Expect = 2e-14
Identities = 33/46 (71%), Positives = 36/46 (78%)
Frame = +2
Query: 65 MSHRKFSXPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPXSFDCF 202
MSHRKFS PRHG MGF PKKRSR +RG++KAFPKDD SKP F
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAF 46
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 279 bits (683), Expect = 4e-75
Identities = 135/215 (62%), Positives = 161/215 (74%), Gaps = 1/215 (0%)
Frame = +3
Query: 471 RWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVK 650
+WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV
Sbjct: 38 KWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVD 97
Query: 651 WAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKGLRKVACIG 830
WAREHLEK + VD+VFAQDEMID I SRWHTKKLPRKTHKGLRKVACIG
Sbjct: 98 WAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIG 157
Query: 831 AWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSIT 1010
AWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++G KNN STE+DL++K+IT
Sbjct: 158 AWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTIT 214
Query: 1011 PMXGSP-IMVX*XRXXDXQGLXXGT*XXFITLKKS 1112
PM G P + +G G ITL+KS
Sbjct: 215 PMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKS 249
Score = 61.7 bits (143), Expect = 1e-09
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +2
Query: 65 MSHRKFSXPRHGSMGFYPKKRSRRHRGKVKAFPK 166
MSHRKFS PRHG MGF PKKRSR +RG++KAF K
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical protein
F13B10.2d protein.
Length = 303
Score = 279 bits (683), Expect = 4e-75
Identities = 135/215 (62%), Positives = 161/215 (74%), Gaps = 1/215 (0%)
Frame = +3
Query: 471 RWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVK 650
+WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV
Sbjct: 38 KWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVD 97
Query: 651 WAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKGLRKVACIG 830
WAREHLEK + VD+VFAQDEMID I SRWHTKKLPRKTHKGLRKVACIG
Sbjct: 98 WAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIG 157
Query: 831 AWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSIT 1010
AWHPSRV+FTVARAGQKG+HHRT +N KIYRIG+ ++G KNN STE+DL++K+IT
Sbjct: 158 AWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTIT 214
Query: 1011 PMXGSP-IMVX*XRXXDXQGLXXGT*XXFITLKKS 1112
PM G P + +G G ITL+KS
Sbjct: 215 PMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKS 249
Score = 61.7 bits (143), Expect = 1e-09
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +2
Query: 65 MSHRKFSXPRHGSMGFYPKKRSRRHRGKVKAFPK 166
MSHRKFS PRHG MGF PKKRSR +RG++KAF K
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 190 bits (463), Expect = 2e-48
Identities = 88/163 (53%), Positives = 107/163 (65%)
Frame = +3
Query: 81 FXHPVMGLWDSIPKRGPXXXXXXXXXXXKTTLANLXHLTAFIGYKAGMTHVVREPDRPGS 260
F P G PK+ K + HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 261 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 440
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 441 XXXXXXXXXXRWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 569
+WQDE G+K IE DF K+ +YCS +RVIAHTQM
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 155 bits (377), Expect = 4e-38
Identities = 80/141 (56%), Positives = 94/141 (66%), Gaps = 1/141 (0%)
Frame = +3
Query: 693 VFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARA 872
V A +MID I SRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 873 GQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMXGSP-IMVX*XR 1049
GQKG+HHRT +N KIYRIG+ ++G KNN STE+DL++K+ITPM G P +
Sbjct: 222 GQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQD 278
Query: 1050 XXDXQGLXXGT*XXFITLKKS 1112
+G G ITL+KS
Sbjct: 279 YIMLRGAVLGPKKRLITLRKS 299
Score = 77.0 bits (181), Expect = 2e-14
Identities = 33/46 (71%), Positives = 36/46 (78%)
Frame = +2
Query: 65 MSHRKFSXPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPXSFDCF 202
MSHRKFS PRHG MGF PKKRSR +RG++KAFPKDD SKP F
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAF 46
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 190 bits (463), Expect = 2e-48
Identities = 88/163 (53%), Positives = 107/163 (65%)
Frame = +3
Query: 81 FXHPVMGLWDSIPKRGPXXXXXXXXXXXKTTLANLXHLTAFIGYKAGMTHVVREPDRPGS 260
F P G PK+ K + HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 261 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYXX 440
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY NW
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKS 125
Query: 441 XXXXXXXXXXRWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 569
+WQDE G+K IE DF K+ +YCS +RVIAHTQM
Sbjct: 126 KKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 155 bits (377), Expect = 4e-38
Identities = 80/141 (56%), Positives = 94/141 (66%), Gaps = 1/141 (0%)
Frame = +3
Query: 693 VFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARA 872
V A +MID I SRWHTKKLPRKTHKGLRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 873 GQKGYHHRTEMNKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMXGSP-IMVX*XR 1049
GQKG+HHRT +N KIYRIG+ ++G KNN STE+DL++K+ITPM G P +
Sbjct: 222 GQKGFHHRTIINNKIYRIGKSALTEEG---KNNGSTEFDLTQKTITPMGGFPRYGIVNQD 278
Query: 1050 XXDXQGLXXGT*XXFITLKKS 1112
+G G ITL+KS
Sbjct: 279 YIMLRGAVLGPKKRLITLRKS 299
Score = 77.0 bits (181), Expect = 2e-14
Identities = 33/46 (71%), Positives = 36/46 (78%)
Frame = +2
Query: 65 MSHRKFSXPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPXSFDCF 202
MSHRKFS PRHG MGF PKKRSR +RG++KAFPKDD SKP F
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAF 46
>AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical
protein F56F4.2 protein.
Length = 299
Score = 30.3 bits (65), Expect = 2.8
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 306 TPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 434
T P + GY++ G+R VW E S+ + KNW+
Sbjct: 201 TDPNGYFDIAGYVDQSSGVRGRFWVWHECFSQKYHKDPCKNWF 243
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 29.1 bits (62), Expect = 6.4
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +2
Query: 287 GCHHHRDSSDGLCRCCWIH*DPSWTTRSVDCLGGAYV*RLSTSLLQKLVQMQEEGF 454
GC + G C W + DPS T + DC +Y ++ L + V M+ GF
Sbjct: 1160 GCSSITCLNGGHCSVAWANTDPSAATTTCDCSRTSYT--GASCSLDEGVHMERSGF 1213
>U13875-9|AAA21160.3| 403|Caenorhabditis elegans Hypothetical
protein C26E6.6 protein.
Length = 403
Score = 28.7 bits (61), Expect = 8.5
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 765 RWHTKKLP-RKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRI 926
RW + P R+T K R++ +G+ +R+ G GY RT +I RI
Sbjct: 241 RWGMRGQPTRRTTKSHRRIGSVGSVGDARIWPGKRMPGHMGYEWRTVSGLEIVRI 295
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,884,920
Number of Sequences: 27780
Number of extensions: 534362
Number of successful extensions: 1434
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1420
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3234681980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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