Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_N11
         (1248 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   1.5  
DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide...    25   4.6  
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    25   6.1  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   6.1  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   8.0  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.6 bits (56), Expect = 1.5
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
 Frame = +1

Query: 355 PRDPLPEG*RXNPSGLPAGEEGHHPRHQGRQGCRPAVRIGR----RMHHPGSGRPRPALR 522
           P  P+P   +  P  +P  + G  PR    QG +    +G+    R  +P  G PRP + 
Sbjct: 222 PGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPPNP-MGGPRPQIS 280

Query: 523 P 525
           P
Sbjct: 281 P 281


>DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide F
           prepropeptide protein.
          Length = 234

 Score = 25.0 bits (52), Expect = 4.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 569 LKIGRNTPSYQAIQENANVLARYASICQSQRI 664
           L+ GRN P + +  ENA +   +     SQR+
Sbjct: 99  LRFGRNDPLWTSFNENALLEENFEKRAPSQRL 130


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 24.6 bits (51), Expect = 6.1
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +3

Query: 222 PPVQWASVCRTSAW 263
           PP  W SV R SAW
Sbjct: 159 PPSNWVSVFRGSAW 172


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 6.1
 Identities = 15/41 (36%), Positives = 15/41 (36%)
 Frame = +1

Query: 349 PVPRDPLPEG*RXNPSGLPAGEEGHHPRHQGRQGCRPAVRI 471
           P P  P P      P G PAG     P   G  G  P V I
Sbjct: 588 PPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPPVTI 628


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.2 bits (50), Expect = 8.0
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 279 TVVVIANCYSALTLCSPRTSLV*SCSTRP 365
           TVVV+++ +SA     PR S+  S  +RP
Sbjct: 763 TVVVVSDLHSAAARTPPRQSIGYSLVSRP 791


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,101,331
Number of Sequences: 2352
Number of extensions: 24384
Number of successful extensions: 101
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 101
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 142652703
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)