Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_N11
(1248 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical pr... 342 4e-94
D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1 pr... 336 1e-92
U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical p... 306 2e-83
D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2 pr... 306 2e-83
U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical p... 306 2e-83
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 29 5.2
Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical pr... 29 6.9
Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical pr... 29 6.9
Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical pr... 29 6.9
M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein ( C.ele... 29 6.9
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 29 9.1
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 29 9.1
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 29 9.1
AF098985-1|AAC67419.2| 882|Caenorhabditis elegans Hypothetical ... 29 9.1
AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical ... 29 9.1
AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical ... 29 9.1
>Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical
protein T05D4.1 protein.
Length = 365
Score = 342 bits (840), Expect = 4e-94
Identities = 163/239 (68%), Positives = 193/239 (80%)
Frame = +2
Query: 116 MSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYR 295
M++Y Q+ T ++EL+ IA AIV P KGILAADESTG+M KRL IG+ENTEENRR+YR
Sbjct: 1 MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYR 60
Query: 296 QLLFSSDAVLSENISGVILFHETLYQKADDXTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 475
QLLF++ A L++ ISGVI+FHET YQK DD P +LL+++GIIPGIKVDKGVVP+ G+
Sbjct: 61 QLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTI 120
Query: 476 DECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQS 655
E TTQGLDDL RCAQYKKDG FAKWRCV KI TPS A++E A+ LARYASICQ
Sbjct: 121 GEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIASNLARYASICQQ 180
Query: 656 QRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALNDHHVYLEGTLLKPNMVTAGQS 832
+VPIVEPE+LPDGEH L R QK+TE VL+ VY ALN+HHV+LEGTLLKPNMVT+GQS
Sbjct: 181 NGLVPIVEPEILPDGEHCLARGQKITETVLSYVYHALNEHHVFLEGTLLKPNMVTSGQS 239
>D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1
protein.
Length = 366
Score = 336 bits (827), Expect = 1e-92
Identities = 162/240 (67%), Positives = 193/240 (80%), Gaps = 1/240 (0%)
Frame = +2
Query: 116 MSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYR 295
M++Y Q+ T ++EL+ IA AIV P KGILAADESTG+M KRL IG+ENTEENRR+YR
Sbjct: 1 MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYR 60
Query: 296 QLLFSSDAVLSENISGVILFHETLYQKADDXTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 475
QLLF++ A L++ ISGVI+FHET YQK DD P +LL+++GIIPGIKVDKGVVP+ G+
Sbjct: 61 QLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTI 120
Query: 476 DECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENA-NVLARYASICQ 652
E TTQGLDDL RCAQYKKDG FAKWRCV KI TPS A++E A N+ +RYASICQ
Sbjct: 121 GEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIASNLGSRYASICQ 180
Query: 653 SQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALNDHHVYLEGTLLKPNMVTAGQS 832
+VPIVEPE+LPDGEH L R QK+TE VL+ VY ALN+HHV+LEGTLLKPNMVT+GQS
Sbjct: 181 QNGLVPIVEPEILPDGEHCLARGQKITETVLSYVYHALNEHHVFLEGTLLKPNMVTSGQS 240
>U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical
protein F01F1.12a protein.
Length = 366
Score = 306 bits (752), Expect = 2e-83
Identities = 156/245 (63%), Positives = 183/245 (74%)
Frame = +2
Query: 140 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 319
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 320 VLSENISGVILFHETLYQKADDXTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 499
L+++ISGVIL+ ET +Q D LL K+GI+PGIK+D GVVPL G+ E TTQGL
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 500 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVE 679
D LA+R A +KK GC FAKWRCVL IG +TPS+ + ENANVLARYASICQ+ +VPIVE
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENANVLARYASICQANGLVPIVE 191
Query: 680 PEVLPDGEHDLDRAQKVTEVVLAAVYKALNDHHVYLEGTLLKPNMVTAGQSCKKTYTPND 859
PEVL DGEHDL RAQKVTE VLA VYKAL DHHVYLEGTLLKPNMVT GQS +
Sbjct: 192 PEVLCDGEHDLARAQKVTEQVLAFVYKALADHHVYLEGTLLKPNMVTPGQSSASKASHEA 251
Query: 860 VXRAT 874
+ AT
Sbjct: 252 IGLAT 256
>D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2
protein.
Length = 366
Score = 306 bits (752), Expect = 2e-83
Identities = 156/245 (63%), Positives = 183/245 (74%)
Frame = +2
Query: 140 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 319
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 320 VLSENISGVILFHETLYQKADDXTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 499
L+++ISGVIL+ ET +Q D LL K+GI+PGIK+D GVVPL G+ E TTQGL
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 500 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVE 679
D LA+R A +KK GC FAKWRCVL IG +TPS+ + ENANVLARYASICQ+ +VPIVE
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENANVLARYASICQANGLVPIVE 191
Query: 680 PEVLPDGEHDLDRAQKVTEVVLAAVYKALNDHHVYLEGTLLKPNMVTAGQSCKKTYTPND 859
PEVL DGEHDL RAQKVTE VLA VYKAL DHHVYLEGTLLKPNMVT GQS +
Sbjct: 192 PEVLCDGEHDLARAQKVTEQVLAFVYKALADHHVYLEGTLLKPNMVTPGQSSASKASHEA 251
Query: 860 VXRAT 874
+ AT
Sbjct: 252 IGLAT 256
>U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical
protein F01F1.12b protein.
Length = 259
Score = 306 bits (751), Expect = 2e-83
Identities = 154/231 (66%), Positives = 179/231 (77%)
Frame = +2
Query: 140 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 319
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 320 VLSENISGVILFHETLYQKADDXTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 499
L+++ISGVIL+ ET +Q D LL K+GI+PGIK+D GVVPL G+ E TTQGL
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 500 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVE 679
D LA+R A +KK GC FAKWRCVL IG +TPS+ + ENANVLARYASICQ+ +VPIVE
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENANVLARYASICQANGLVPIVE 191
Query: 680 PEVLPDGEHDLDRAQKVTEVVLAAVYKALNDHHVYLEGTLLKPNMVTAGQS 832
PEVL DGEHDL RAQKVTE VLA VYKAL DHHVYLEGTLLKPNMVT GQS
Sbjct: 192 PEVLCDGEHDLARAQKVTEQVLAFVYKALADHHVYLEGTLLKPNMVTPGQS 242
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 29.5 bits (63), Expect = 5.2
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +1
Query: 376 G*RXNPSGLPAGEEGHH--PRHQGRQGCRPAVRIGRRMHHPGSGRPRP 513
G R P P G GHH P H G P+ R G HH RP P
Sbjct: 382 GGRHGPPHCP-GRHGHHGPPHHHHHDGRSPS-RHGHHHHHHHGCRPFP 427
>Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical
protein Y57G11C.9b protein.
Length = 625
Score = 29.1 bits (62), Expect = 6.9
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = -2
Query: 788 RGTRGGRSAPYTRRPERPQSPSGRGPGRARHQVRLRARQLARCVGSDRWRRSGR 627
R RS +R R +SP+ R +RH+ R + R +R R R SGR
Sbjct: 177 RSPSRSRSRSRSRSVSRSKSPASRNGRVSRHRSRSQNRSRSRSNTRSRSRSSGR 230
>Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical
protein Y57G11C.9a protein.
Length = 553
Score = 29.1 bits (62), Expect = 6.9
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = -2
Query: 788 RGTRGGRSAPYTRRPERPQSPSGRGPGRARHQVRLRARQLARCVGSDRWRRSGR 627
R RS +R R +SP+ R +RH+ R + R +R R R SGR
Sbjct: 177 RSPSRSRSRSRSRSVSRSKSPASRNGRVSRHRSRSQNRSRSRSNTRSRSRSSGR 230
>Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical
protein T01B7.7 protein.
Length = 348
Score = 29.1 bits (62), Expect = 6.9
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -2
Query: 800 GVSPRGTRGGRSAPYTRRPERPQSPSGRG--PGRARHQ 693
G P G G R P PE PQ P+GR PG++ Q
Sbjct: 256 GERPLGRPGPRGPPGEAGPEGPQGPTGRDAYPGQSGPQ 293
>M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein (
C.elegans collagen (rol-6) gene, complete cds. ).
Length = 348
Score = 29.1 bits (62), Expect = 6.9
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -2
Query: 800 GVSPRGTRGGRSAPYTRRPERPQSPSGRG--PGRARHQ 693
G P G G R P PE PQ P+GR PG++ Q
Sbjct: 256 GERPLGRPGPRGPPGEAGPEGPQGPTGRDAYPGQSGPQ 293
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 28.7 bits (61), Expect = 9.1
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +2
Query: 146 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 289
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 747 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 806
Query: 290 YRQLLFSSDA 319
Y QL+ SD+
Sbjct: 807 YEQLVSESDS 816
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 28.7 bits (61), Expect = 9.1
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +2
Query: 146 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 289
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 733 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 792
Query: 290 YRQLLFSSDA 319
Y QL+ SD+
Sbjct: 793 YEQLVSESDS 802
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 28.7 bits (61), Expect = 9.1
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +2
Query: 146 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 289
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 733 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 792
Query: 290 YRQLLFSSDA 319
Y QL+ SD+
Sbjct: 793 YEQLVSESDS 802
>AF098985-1|AAC67419.2| 882|Caenorhabditis elegans Hypothetical
protein C08G5.1 protein.
Length = 882
Score = 28.7 bits (61), Expect = 9.1
Identities = 41/160 (25%), Positives = 64/160 (40%), Gaps = 4/160 (2%)
Frame = +2
Query: 257 GVENTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKADDXTPLVSLLEKKGIIPGI 436
G+EN+E + + V+ G+ + + QK D PL K +I GI
Sbjct: 582 GIENSENTKTESFASIAKDSQVVGMATRGITIMEQMASQKV-DLKPL------KVLIAGI 634
Query: 437 KVD-KGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKW-RCV--LKIGRNTPSYQA 604
KV+ K V P ED + L L + KK+ F K + V K+ + +QA
Sbjct: 635 KVEMKNVDP----EDAKNLKSLYGLESELNRIKKEAGTFMKTVKPVNSTKLSDYSEIFQA 690
Query: 605 IQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQ 724
++ V ++I S I+ I P L +AQ
Sbjct: 691 VKSVKGVSMNLSAIIGSVEILKIRLPSRTRRAASGLTKAQ 730
>AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical
protein C02B10.5 protein.
Length = 698
Score = 28.7 bits (61), Expect = 9.1
Identities = 24/85 (28%), Positives = 32/85 (37%), Gaps = 3/85 (3%)
Frame = +1
Query: 352 VPRDPLPEG*RXNPSGLPAGEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRPALRP-- 525
+P +P G P G+ G G P H G QG P + M G P+P P
Sbjct: 587 MPPGMMPPG--MMPPGMHPGMAGMPPMHPGMQGMPPMHPGMQGMPGMPHGPPQPPQNPAL 644
Query: 526 -VQEGRLPLRQVALRAEDWPQHPLV 597
V R + A P HP++
Sbjct: 645 MVAGNRAGSAEAAAAQMGNPHHPMM 669
>AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical
protein Y41D4A.8 protein.
Length = 347
Score = 28.7 bits (61), Expect = 9.1
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 383 DXTPLVSLLEKKGII--PGIKVDKGVVPLFGSEDECT 487
D +PLVS+L G+I P + + VPLF ED CT
Sbjct: 10 DPSPLVSVL---GLIKSPDLMIGSTEVPLFEEEDMCT 43
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,316,152
Number of Sequences: 27780
Number of extensions: 541726
Number of successful extensions: 1876
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1871
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3464240056
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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