Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_N02
(1161 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P09234 Cluster: U1 small nuclear ribonucleoprotein C; n... 101 4e-20
UniRef50_A6NK15 Cluster: Uncharacterized protein ENSP00000305492... 97 8e-19
UniRef50_Q1EA57 Cluster: Predicted protein; n=12; Pezizomycotina... 52 3e-05
UniRef50_Q84VV2 Cluster: At4g03120; n=7; Viridiplantae|Rep: At4g... 52 4e-05
UniRef50_Q54YA5 Cluster: Putative uncharacterized protein; n=1; ... 48 6e-04
UniRef50_Q0UP28 Cluster: Putative uncharacterized protein; n=1; ... 48 6e-04
UniRef50_Q4P2Q5 Cluster: Putative uncharacterized protein; n=1; ... 44 0.010
UniRef50_Q9P794 Cluster: U1 snRNP-associated protein Usp103; n=1... 43 0.017
UniRef50_Q5KC16 Cluster: U1 small nuclear ribonucleoprotein, put... 42 0.023
UniRef50_Q4S9I4 Cluster: Chromosome undetermined SCAF14696, whol... 40 0.16
UniRef50_Q5YEU6 Cluster: U1 small nuclear ribonucleoprotein; n=1... 38 0.37
UniRef50_Q8IAW3 Cluster: Putative uncharacterized protein PF08_0... 37 0.86
UniRef50_Q4UJ14 Cluster: RNA-binding protein (U1 snRNP-like), pu... 36 2.0
UniRef50_A7AMW3 Cluster: U1 zinc finger family protein; n=1; Bab... 36 2.6
UniRef50_Q22NU5 Cluster: U1 zinc finger family protein; n=1; Tet... 35 3.5
UniRef50_A5JZQ2 Cluster: Putative uncharacterized protein; n=2; ... 35 3.5
UniRef50_Q54LA4 Cluster: Putative uncharacterized protein; n=1; ... 35 4.6
UniRef50_Q4DBD4 Cluster: Putative uncharacterized protein; n=3; ... 35 4.6
UniRef50_A7S951 Cluster: Predicted protein; n=1; Nematostella ve... 35 4.6
UniRef50_Q01EB2 Cluster: U1snrC U1 small nuclear ribonucleoprote... 34 6.1
UniRef50_A0CQS0 Cluster: Chromosome undetermined scaffold_24, wh... 34 6.1
UniRef50_A5GE19 Cluster: Regulator of chromosome condensation, R... 34 8.0
>UniRef50_P09234 Cluster: U1 small nuclear ribonucleoprotein C;
n=36; Bilateria|Rep: U1 small nuclear ribonucleoprotein
C - Homo sapiens (Human)
Length = 159
Score = 101 bits (242), Expect = 4e-20
Identities = 48/71 (67%), Positives = 51/71 (71%), Gaps = 3/71 (4%)
Frame = +3
Query: 39 DLXLTHXSPRVRKTHCTGRKHXDNVKFYYQKWMEEQAQHLIDATTAAFKAGKIAQNPFG- 215
D LTH SP VRKTHC+GRKH +NVK YYQKWMEEQAQ LID TTAAF+ GKI PF
Sbjct: 10 DTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQGKIPPTPFSA 69
Query: 216 --NKGTAIPPP 242
G IPPP
Sbjct: 70 PPPAGAMIPPP 80
>UniRef50_A6NK15 Cluster: Uncharacterized protein ENSP00000305492;
n=22; Eumetazoa|Rep: Uncharacterized protein
ENSP00000305492 - Homo sapiens (Human)
Length = 155
Score = 97.1 bits (231), Expect = 8e-19
Identities = 46/68 (67%), Positives = 50/68 (73%), Gaps = 3/68 (4%)
Frame = +3
Query: 48 LTHXSPRVRKTHCTGRKHXDNVKFYYQKWMEEQAQHLIDATTAAFKAGKIAQNPFGNK-- 221
LTH SP VRKTHC+GRKH +NVK YYQKWM+EQAQ LID TTAAF+ GKI PF
Sbjct: 13 LTHDSPPVRKTHCSGRKHKENVKDYYQKWMKEQAQSLIDKTTAAFQQGKIPPAPFSAPPP 72
Query: 222 -GTAIPPP 242
G IPPP
Sbjct: 73 VGAMIPPP 80
>UniRef50_Q1EA57 Cluster: Predicted protein; n=12;
Pezizomycotina|Rep: Predicted protein - Coccidioides
immitis
Length = 223
Score = 52.0 bits (119), Expect = 3e-05
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +3
Query: 69 VRKTHCTGRKHXDNVKFYYQKWMEEQAQHLIDATTAAFKA-GKIAQNPFGNKGTAIPPP 242
VRK H GR H NV YYQ+ E+AQ +ID+ T+++ A G+ A NP + +PPP
Sbjct: 3 VRKAHNAGRNHLRNVVEYYQQIGHEKAQSVIDSITSSYAAEGQAAANPMLQQPGGLPPP 61
>UniRef50_Q84VV2 Cluster: At4g03120; n=7; Viridiplantae|Rep:
At4g03120 - Arabidopsis thaliana (Mouse-ear cress)
Length = 207
Score = 51.6 bits (118), Expect = 4e-05
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +3
Query: 39 DLXLTHXSPRVRKTHCTGRKHXDNVKFYYQKWMEEQAQHLID 164
D LTH SP VRK H G KH NV+ Y+Q++ E+Q Q LID
Sbjct: 10 DTYLTHDSPSVRKQHNAGYKHKANVRIYHQQFEEQQTQSLID 51
>UniRef50_Q54YA5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 174
Score = 47.6 bits (108), Expect = 6e-04
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = +3
Query: 39 DLXLTHXSPRVRKTHCTGRKHXDNVKFYYQKWMEEQAQHLIDATTAAFKAGK---IAQNP 209
D LTH SP VRK+H G++H V+ +YQ++ E Q LI+A ++ K I Q P
Sbjct: 10 DKYLTHDSPSVRKSHTVGKQHKLAVQLFYQQFEAEFTQSLIEARLKEYEESKGRLIHQPP 69
Query: 210 FGNKGTAIPPPW 245
G IP P+
Sbjct: 70 MG----IIPTPY 77
>UniRef50_Q0UP28 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 206
Score = 47.6 bits (108), Expect = 6e-04
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +3
Query: 39 DLXLTHXSPRVRKTHCTGRKHXDNVKFYYQKWMEEQAQHLIDATTAAF 182
D+ LTH S VRK H GR H NV+ YY++ +Q Q +I++ T A+
Sbjct: 10 DVYLTHDSMSVRKAHNNGRNHLRNVQAYYEQISSDQTQQVINSITDAY 57
>UniRef50_Q4P2Q5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 221
Score = 43.6 bits (98), Expect = 0.010
Identities = 20/42 (47%), Positives = 25/42 (59%)
Frame = +3
Query: 39 DLXLTHXSPRVRKTHCTGRKHXDNVKFYYQKWMEEQAQHLID 164
D+ LTH S VRK H +GR H NV+ YYQ E Q ++D
Sbjct: 10 DVFLTHDSVSVRKAHNSGRNHLQNVREYYQTLEPECIQQVLD 51
>UniRef50_Q9P794 Cluster: U1 snRNP-associated protein Usp103; n=1;
Schizosaccharomyces pombe|Rep: U1 snRNP-associated
protein Usp103 - Schizosaccharomyces pombe (Fission
yeast)
Length = 182
Score = 42.7 bits (96), Expect = 0.017
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +3
Query: 48 LTHXSPRVRKTHCTGRKHXDNVKFYYQKWMEEQAQHLID--ATTAAFKAG 191
LTH S VRK H GR H NV+ YY K +E+AQ ++ A++ K G
Sbjct: 13 LTHDSQSVRKAHNAGRAHIQNVQDYYTKVAQEEAQKQLEERASSGFLKKG 62
>UniRef50_Q5KC16 Cluster: U1 small nuclear ribonucleoprotein,
putative; n=1; Filobasidiella neoformans|Rep: U1 small
nuclear ribonucleoprotein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 220
Score = 42.3 bits (95), Expect = 0.023
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = +3
Query: 39 DLXLTHXSPRVRKTHCTGRKHXDNVKFYYQKWMEEQAQHLIDATTAAFKAG 191
D+ LTH S RK H +GR H NV+ Y+ QAQ LID ++G
Sbjct: 10 DIYLTHDSMNARKAHNSGRNHVANVRDYFAGLGGNQAQSLIDQIIQQHESG 60
>UniRef50_Q4S9I4 Cluster: Chromosome undetermined SCAF14696, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF14696, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1835
Score = 39.5 bits (88), Expect = 0.16
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Frame = +2
Query: 143 TSTTSHRCNNSGIQSRQNCSKSIWQQRHCNTTTLGSFGNGTRRTPTSC-TRWSSRYDTSS 319
TS H+C+ G + +Q+ + S W T++ + G+G PTS ++ S D S
Sbjct: 652 TSDNQHQCSR-GDERKQSSTGSGWGTATPATSSQTTGGSGWGDHPTSWDSKASGNGDGHS 710
Query: 320 IYGSWRSYGTTNDDGSTWANAANDGNETAYDGP 418
+ Y ++N+ G+TW+N D + T + P
Sbjct: 711 GWDDGSGYKSSNNTGNTWSNNKPDRSNTWNNAP 743
>UniRef50_Q5YEU6 Cluster: U1 small nuclear ribonucleoprotein; n=1;
Bigelowiella natans|Rep: U1 small nuclear
ribonucleoprotein - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 128
Score = 38.3 bits (85), Expect = 0.37
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 39 DLXLTHXSPRVRKTHCTGRKHXDNVKFYYQKWM 137
D+ LTH S RK H GR+H +NV+ YY +++
Sbjct: 10 DIYLTHDSQAGRKQHMHGRRHQENVRQYYSEFL 42
>UniRef50_Q8IAW3 Cluster: Putative uncharacterized protein
PF08_0084; n=3; Plasmodium|Rep: Putative uncharacterized
protein PF08_0084 - Plasmodium falciparum (isolate 3D7)
Length = 235
Score = 37.1 bits (82), Expect = 0.86
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +3
Query: 39 DLXLTHXSPRVRKTHCTGRKHXDNVKFYYQKWMEEQAQHLIDATTAAFKAGKIAQNPFGN 218
D+ LTH SP R+ H GRKH Y+Q + E+ + F + NP GN
Sbjct: 10 DIYLTHSSPVGRRQHIHGRKHISAKIEYFQNLLREEG--ITPQNFLGFLNNRNINNPLGN 67
>UniRef50_Q4UJ14 Cluster: RNA-binding protein (U1 snRNP-like),
putative; n=2; Theileria|Rep: RNA-binding protein (U1
snRNP-like), putative - Theileria annulata
Length = 151
Score = 35.9 bits (79), Expect = 2.0
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3
Query: 42 LXLTHXSPRVRKTHCTGRKHXDNVKFYYQKWMEEQ 146
+ LTH SP RK H GRKH Y+Q+ + EQ
Sbjct: 11 IYLTHSSPAGRKQHSQGRKHISAKVEYFQRLVREQ 45
>UniRef50_A7AMW3 Cluster: U1 zinc finger family protein; n=1;
Babesia bovis|Rep: U1 zinc finger family protein -
Babesia bovis
Length = 128
Score = 35.5 bits (78), Expect = 2.6
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +3
Query: 42 LXLTHXSPRVRKTHCTGRKHXDNVKFYYQKWMEE 143
+ LTH SP RK H GRKH YYQ+ + E
Sbjct: 11 IYLTHSSPAGRKQHSMGRKHISMKVEYYQRLVRE 44
>UniRef50_Q22NU5 Cluster: U1 zinc finger family protein; n=1;
Tetrahymena thermophila SB210|Rep: U1 zinc finger family
protein - Tetrahymena thermophila SB210
Length = 626
Score = 35.1 bits (77), Expect = 3.5
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 42 LXLTHXSPRVRKTHCTGRKHXDNVKFYYQKWMEE 143
+ LTH SP R H GRKH +N YY++ +E+
Sbjct: 394 IYLTHSSPSGRSQHAKGRKHINNRIEYYKQVIED 427
>UniRef50_A5JZQ2 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 240
Score = 35.1 bits (77), Expect = 3.5
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +3
Query: 39 DLXLTHXSPRVRKTHCTGRKHXDNVKFYYQKWMEEQAQHLIDATTAAFKAGKIAQNPFGN 218
D+ LTH SP R+ H GRKH Y+Q + E+ + F + N GN
Sbjct: 10 DIYLTHSSPVGRRQHIQGRKHISAKIEYFQNLLREEG--ITPQNFLGFLGNRAFNNMLGN 67
>UniRef50_Q54LA4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 880
Score = 34.7 bits (76), Expect = 4.6
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +2
Query: 143 TSTTSHRCNNSGIQSRQN----CSKSIWQQRHCNTTTLGSFGNGTRRTPTSCTRWSSRYD 310
TSTTS+ CNNS + N S SI N + + S + + TP++ + + +
Sbjct: 331 TSTTSNNCNNSNNNNNNNGNHSNSNSIGSNSSLN-SGINSILSTSSMTPSNSSHFHDNNN 389
Query: 311 TSSIYGSWRSYGTTNDDGSTWANAAND-GNETAYDGPH 421
++I S + D + A + G ET +D PH
Sbjct: 390 KNNITTDGESETSFETDSQISSKALDGAGGETIFDTPH 427
>UniRef50_Q4DBD4 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma|Rep: Putative uncharacterized protein -
Trypanosoma cruzi
Length = 554
Score = 34.7 bits (76), Expect = 4.6
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Frame = +2
Query: 59 FTSCQENSLHRKKTXRQCEVLLSEMDGGTSTTSHRCNNSGIQSR-QNCSKSIWQQRHCNT 235
FTS + S +++ R+ S+ GG++ T H N S + SR N SK I R N+
Sbjct: 220 FTSAIQPSYLQEENRRESNTGNSKNIGGSTDTEHDNNASSVNSRGSNNSKKITSNR-SNS 278
Query: 236 TTLGSFGNGTRRTPTSCTRWSSRYDTSSIYGSWRSYGT 349
T+ S G+ R S+R + Y SW + T
Sbjct: 279 TSSNS--GGSSGIGGGGGRGSARQSRLTDYKSWDTINT 314
>UniRef50_A7S951 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 658
Score = 34.7 bits (76), Expect = 4.6
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +2
Query: 143 TSTTSHRCNNSGIQSRQNCSKSIWQQRHCNTTTLGSFGNGTRRTPTSCTRWSSRYDTSSI 322
TSTTS+ CNN + S + + T+T S+ + T TPT ++ Y +++
Sbjct: 180 TSTTSYTCNNCYTCNTSYTSTTSYTSTPSYTSTT-SYTSTTSYTPTPSYTSTTSYTSTTS 238
Query: 323 YGSWRSYGTTNDDGST 370
Y S SY T ST
Sbjct: 239 YTSTTSYTCTTSYTST 254
>UniRef50_Q01EB2 Cluster: U1snrC U1 small nuclear ribonucleoprotein
C, probable; n=1; Ostreococcus tauri|Rep: U1snrC U1
small nuclear ribonucleoprotein C, probable -
Ostreococcus tauri
Length = 66
Score = 34.3 bits (75), Expect = 6.1
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +3
Query: 39 DLXLTHXSPRVRKTHCTGRKHXDNVKFYYQKW 134
D LTH S VRK H +G KH N + YY ++
Sbjct: 10 DAFLTHDSATVRKQHNSGFKHKANARAYYAQF 41
>UniRef50_A0CQS0 Cluster: Chromosome undetermined scaffold_24, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_24,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 132
Score = 34.3 bits (75), Expect = 6.1
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +3
Query: 42 LXLTHXSPRVRKTHCTGRKHXDNVKFYYQKWMEEQAQHLIDATTAAFK 185
+ LTH SP RK H G+KH + YY+ M + L+D A+F+
Sbjct: 11 IYLTHSSPSGRKQHSLGKKHISAREDYYRAVMSD----LVDQLKASFQ 54
>UniRef50_A5GE19 Cluster: Regulator of chromosome condensation, RCC1;
n=1; Geobacter uraniumreducens Rf4|Rep: Regulator of
chromosome condensation, RCC1 - Geobacter uraniumreducens
Rf4
Length = 1919
Score = 33.9 bits (74), Expect = 8.0
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +2
Query: 245 GSFGNGTRRTPTSCTRWSSRYDTSSIYGSWRSYGTTNDDGSTWANAANDGNETAYDGPH 421
G G+G+R R S D + +Y W T DGS W AN ++ DG +
Sbjct: 985 GQLGDGSRLNRALPARVGSDTDWTQVYAGWGHVVATKTDGSLWTWGANYSSQLG-DGTY 1042
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 687,462,737
Number of Sequences: 1657284
Number of extensions: 11372942
Number of successful extensions: 32321
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 30723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32239
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 115472708212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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