Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_N01
(1171 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC15D4.15 |pho2||4-nitrophenylphosphatase |Schizosaccharomyces... 85 2e-17
SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces... 28 2.2
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 27 3.8
SPCC794.08 |||HEAT repeat protein, unknown biological role|Schiz... 27 3.8
SPAC24B11.05 |||pyrimidine 5'-nucleotidase |Schizosaccharomyces ... 27 5.0
SPCC1393.03 |rps1501|rps15-1|40S ribosomal protein S15|Schizosac... 27 5.0
SPCC645.02 |||conserved protein |Schizosaccharomyces pombe|chr 3... 27 6.6
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 26 8.8
>SPBC15D4.15 |pho2||4-nitrophenylphosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 298
Score = 84.6 bits (200), Expect = 2e-17
Identities = 66/251 (26%), Positives = 103/251 (41%), Gaps = 6/251 (2%)
Frame = +3
Query: 153 SVEDLHKFLDSFDHVLSDCDGVIWTQDS-LPRVGEFFKQMKKRGKTVNFVSNNSLRSRAN 329
S ++ +F+D FD L DCDGV+W+ +P V + K ++ GK + FVSNNS +SR
Sbjct: 7 SPKEYKEFIDKFDVFLFDCDGVLWSGSKPIPGVTDTMKLLRSLGKQIIFVSNNSTKSRET 66
Query: 330 YEAQFKAASIDNGFESLIIPSIAVAEYLKSV---TFNKTVYCVTCTETKRVLEAHGFKCK 500
Y + I E + + + A Y+K V +K V+ + + L+ G
Sbjct: 67 YMNKINEHGIAAKLEEIYPSAYSSATYVKKVLKLPADKKVFVLGEAGIEDELDRVGVAHI 126
Query: 501 EG--PDLGPEYYGEYIQYLEDDEEIGAVVFDSDFKINLPKMYRAITYLKRPEVLFINGAT 674
G P L E ++ + D +GAV+ D + K A YL+ P F+
Sbjct: 127 GGTDPSLRRALASEDVEKIGPDPSVGAVLCGMDMHVTYLKYCMAFQYLQDPNCAFLLTNQ 186
Query: 675 DRMVPMKXXXXXXXXXXXXXXXXXEVKREPVLLGKPGRVFGEFAMKRAGITDPSRVLFIG 854
D P R+P +LGKP E + D + F+G
Sbjct: 187 DSTFPTN-GKFLPGSGAISYPLIFSTGRQPKILGKPYDEMMEAIIANVNF-DRKKACFVG 244
Query: 855 DMIAQDVSLGK 887
D + D+ K
Sbjct: 245 DRLNTDIQFAK 255
>SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1639
Score = 28.3 bits (60), Expect = 2.2
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -3
Query: 854 TDKKNSTGIGDAGSLHSEFTENPSWLPKQHGLSFHF 747
T+ +NS+ GS+HS E+P+ L +QH SF F
Sbjct: 40 TNSQNSS----VGSVHSPILESPTSLNRQHRNSFSF 71
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 27.5 bits (58), Expect = 3.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 875 YILGDHVTDKKNSTGIGDAGSLHSEFTENP 786
Y +++T +GI DA SL S+FT +P
Sbjct: 147 YTSSNNMTSTSRMSGIHDALSLQSDFTRSP 176
>SPCC794.08 |||HEAT repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 798
Score = 27.5 bits (58), Expect = 3.8
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 304 ITAFDPEQIMKLNSKQPASTTALRA*SFHLSQWQSTLNQLHS 429
+TAF Q KLN+K+ +S F L W + +LH+
Sbjct: 436 LTAFHKLQNEKLNTKKESSAPLSLVTDFLLHSWPKSAERLHT 477
>SPAC24B11.05 |||pyrimidine 5'-nucleotidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 226
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 768 LLGKPGRVFGEFAMKRAGITDPSRVLFIGD 857
L+ KP E M+ AG+TD + +F+ D
Sbjct: 145 LIAKPMPEMYERVMREAGVTDKDKCIFVDD 174
>SPCC1393.03 |rps1501|rps15-1|40S ribosomal protein
S15|Schizosaccharomyces pombe|chr 3|||Manual
Length = 153
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 90 QKKSLKVLSIMGIESKHLLDLSVEDL 167
+K+S + + G+E + LLDLS E L
Sbjct: 16 KKRSFRTFAYRGVELEQLLDLSAEQL 41
>SPCC645.02 |||conserved protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 188
Score = 26.6 bits (56), Expect = 6.6
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +3
Query: 822 ITDPSRVLFIGDMIAQDVSLGKAVG 896
++ S++LFIGD + D++L +G
Sbjct: 144 VSSASQILFIGDRLLTDITLANIMG 168
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 26.2 bits (55), Expect = 8.8
Identities = 16/80 (20%), Positives = 36/80 (45%)
Frame = +3
Query: 72 FPYYIIQKKSLKVLSIMGIESKHLLDLSVEDLHKFLDSFDHVLSDCDGVIWTQDSLPRVG 251
FPY ++ + +L IE +HL+ S +++ ++ F IW + L +
Sbjct: 1809 FPYELVNVVYMALLKSSPIEVRHLVKSSFDNIFSYI--FSEEPESKKSPIWFELPLQVIS 1866
Query: 252 EFFKQMKKRGKTVNFVSNNS 311
+ + + +F+S++S
Sbjct: 1867 SQSQNISQLLNVYDFISSHS 1886
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,917,834
Number of Sequences: 5004
Number of extensions: 79155
Number of successful extensions: 221
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 219
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 627537330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -