Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_M24
(1158 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 246 6e-64
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 126 1e-27
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 95 3e-18
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 90 1e-16
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 79 3e-13
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 78 5e-13
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 76 2e-12
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 5e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 4e-07
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 58 4e-07
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 55 4e-06
UniRef50_A4LA78 Cluster: Putative uncharacterized protein; n=1; ... 48 5e-04
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 47 0.001
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 46 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.006
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.070
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.12
UniRef50_A7SYZ9 Cluster: Predicted protein; n=1; Nematostella ve... 36 2.6
UniRef50_Q51612 Cluster: Putative uncharacterized protein; n=3; ... 35 4.6
UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4; ... 35 4.6
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 8.0
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 8.0
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 246 bits (603), Expect = 6e-64
Identities = 115/126 (91%), Positives = 116/126 (92%)
Frame = +2
Query: 476 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 655
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 656 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTXAPYPVTIVLSP 835
CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPT APYPVTIVLSP
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSP 121
Query: 836 TR*DTT 853
TR DTT
Sbjct: 122 TRKDTT 127
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 126 bits (303), Expect = 1e-27
Identities = 73/120 (60%), Positives = 78/120 (65%)
Frame = +2
Query: 308 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 487
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 488 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 667
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P LP
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 95.1 bits (226), Expect = 3e-18
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +2
Query: 494 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 655
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 89.8 bits (213), Expect = 1e-16
Identities = 49/94 (52%), Positives = 52/94 (55%)
Frame = +2
Query: 569 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCR 748
VR GETRQD K P P PPFSL + + GIS RCR
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 749 SFAPSWAVCTNPPFSPTXAPYPVTIVLSPTR*DT 850
SFAPSWAV NPPFSPT APYPVT+ LSPTR T
Sbjct: 83 SFAPSWAVSKNPPFSPTAAPYPVTVHLSPTRKST 116
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 78.6 bits (185), Expect = 3e-13
Identities = 40/78 (51%), Positives = 48/78 (61%)
Frame = -3
Query: 850 RVLPGWTQDDSYXXXXXXXXXXXXXAHSPAWSERPTPN*DTYSVSYEKAPRFPKGERRTG 671
RV PGWTQDDSY A+SPAWSERP P+ DT SVSYEKAPRFPKG++
Sbjct: 5 RVRPGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQ 64
Query: 670 IR*AAGSEQESARGSFQG 617
+ +G Q R + +G
Sbjct: 65 V---SGKRQGRNRRAHEG 79
Score = 48.8 bits (111), Expect = 3e-04
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = -1
Query: 687 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 568
+K QVSGKRQGRNRRAHEGA+ K SL PPLT
Sbjct: 60 KKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 77.8 bits (183), Expect = 5e-13
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +1
Query: 634 VRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 744
+RSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 76.2 bits (179), Expect = 2e-12
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +1
Query: 772 VHEPPVQPDRCALSGNYRLESNPVRHDLSXLAXATGKQ 885
+HEPPVQPDRCALSGNYRLESNPVRHDLS LA ATG +
Sbjct: 1 MHEPPVQPDRCALSGNYRLESNPVRHDLSPLAAATGNR 38
Score = 48.4 bits (110), Expect = 3e-04
Identities = 22/43 (51%), Positives = 22/43 (51%)
Frame = +2
Query: 881 NRIXXXRYVXGATXFLXWWXXYXYXXXTXFGXXXLXXPXXFXK 1009
NRI RYV GAT FL WW Y Y T FG L P F K
Sbjct: 37 NRISRARYVGGATEFLKWWPNYGYTRRTVFGICALLKPVTFGK 79
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 5e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -3
Query: 484 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 371
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 4e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 284 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 451
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 58.0 bits (134), Expect = 4e-07
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +2
Query: 383 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 556
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 557 IDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 655
I Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 54.8 bits (126), Expect = 4e-06
Identities = 24/40 (60%), Positives = 25/40 (62%)
Frame = -3
Query: 856 ISRVLPGWTQDDSYXXXXXXXXXXXXXAHSPAWSERPTPN 737
+ R LPGWTQDDSY AHSPAWSERPTPN
Sbjct: 3 LRRALPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTPN 42
>UniRef50_A4LA78 Cluster: Putative uncharacterized protein; n=1;
Edwardsiella tarda|Rep: Putative uncharacterized protein
- Edwardsiella tarda
Length = 99
Score = 48.0 bits (109), Expect = 5e-04
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +2
Query: 773 CTNPPFSPTXAPYPVTIVLSPTR*DTTYRHWQ 868
CTN PFSPT P VT++L+PT DT RHW+
Sbjct: 68 CTNSPFSPTITPVQVTVLLNPTLTDTQKRHWR 99
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 46.8 bits (106), Expect = 0.001
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = +3
Query: 75 EGPLDPDMIRYIDEFGQTTTRMQ 143
E P DPDMIRYIDEFGQTTTRMQ
Sbjct: 342 ELPGDPDMIRYIDEFGQTTTRMQ 364
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 45.6 bits (103), Expect = 0.002
Identities = 21/41 (51%), Positives = 24/41 (58%)
Frame = -3
Query: 850 RVLPGWTQDDSYXXXXXXXXXXXXXAHSPAWSERPTPN*DT 728
R PGWTQ +SY A+SPAWSERPTP+ DT
Sbjct: 5 RAFPGWTQVNSYRIRRSSRAERGVLAYSPAWSERPTPSRDT 45
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.006
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 403 HSKAVIRLSTESGDNAGKNM 462
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.070
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 282 SALMNRPTRGERRFAYW 332
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.12
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 354 ERGSGRAPNTQTASPRALADSLMQ 283
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A7SYZ9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1107
Score = 35.5 bits (78), Expect = 2.6
Identities = 29/82 (35%), Positives = 36/82 (43%)
Frame = +2
Query: 569 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCR 748
+RG T Q D R P +CA RP R D C ++ WR HAVG
Sbjct: 638 LRGPATGQAVVDPGRMPRPV-TCA--GRPTRGLDLCGLATVSWVWRSTKCHAVG------ 688
Query: 749 SFAPSWAVCTNPPFSPTXAPYP 814
++P + CT P S APYP
Sbjct: 689 KYSPP-STCTRRPKSQRDAPYP 709
>UniRef50_Q51612 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Plasmid
ColE1
Length = 96
Score = 34.7 bits (76), Expect = 4.6
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -2
Query: 881 LPVAXASXDKSCLTGLDSRR 822
LPVA AS K+CLTGLDSRR
Sbjct: 77 LPVAAASGVKACLTGLDSRR 96
Score = 33.9 bits (74), Expect = 8.0
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -3
Query: 1009 FSEXXWXXQXXXTKXCXXXVXVXXPPXQEXCST 911
FSE W Q TK C V V P QE CST
Sbjct: 34 FSEGNWLQQSADTKYCPSSVAVVGPLLQELCST 66
>UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 668)
Length = 755
Score = 34.7 bits (76), Expect = 4.6
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -1
Query: 714 MRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKR 610
+R+R A RR GG+ G+R+GRNR+ + RG+R
Sbjct: 355 VRRRAAPRRRHGGEWRGRRRGRNRKRRQ--QRGQR 387
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 8.0
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -3
Query: 493 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 371
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 8.0
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +3
Query: 165 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 332
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 890,277,774
Number of Sequences: 1657284
Number of extensions: 18402208
Number of successful extensions: 53438
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 50263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53396
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 115066114169
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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