Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_M23
         (1166 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    27   1.4  
AF458073-1|AAL68639.1|  166|Anopheles gambiae D7-related 5 prote...    25   4.2  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    24   7.4  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 26.6 bits (56), Expect = 1.4
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +1

Query: 460 INDSVKVIPTPGHTQSDVTVIATTRRGEAIAITGDL 567
           +ND +KV PT    Q D T I    R  AIA+ GD+
Sbjct: 761 LNDILKVGPT---IQQDTTDILLRWRRRAIAVVGDV 793


>AF458073-1|AAL68639.1|  166|Anopheles gambiae D7-related 5 protein
           protein.
          Length = 166

 Score = 25.0 bits (52), Expect = 4.2
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 557 VIAIASPLLVVAITVTSDCV 498
           VIA+  PL++V     SDCV
Sbjct: 8   VIALICPLIIVETLAVSDCV 27


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 24.2 bits (50), Expect = 7.4
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 655 SICXSFAVLGLHFQLPTXX*DFXYLHVFQINH 560
           SIC +  VL +HF+ P       ++    INH
Sbjct: 316 SICVTVIVLNIHFRSPQTHTMAPWVRTIFINH 347


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,550
Number of Sequences: 2352
Number of extensions: 13452
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 131616534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)