Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_M23
         (1166 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC031288-1|AAH31288.1|  265|Homo sapiens similar to hypothetical...    94   1e-18
BC036457-1|AAH36457.1|  385|Homo sapiens paroxysmal nonkinesigen...    31   6.1  
BC002937-1|AAH02937.1|  361|Homo sapiens paroxysmal nonkinesioge...    31   6.1  
AY358753-1|AAQ89113.1|  361|Homo sapiens AWQG2491 protein.             31   6.1  
AB033010-1|BAA86498.1|  380|Homo sapiens KIAA1184 protein protein.     31   6.1  

>BC031288-1|AAH31288.1|  265|Homo sapiens similar to hypothetical
           protein MGC49416 protein.
          Length = 265

 Score = 93.9 bits (223), Expect = 1e-18
 Identities = 60/167 (35%), Positives = 86/167 (51%), Gaps = 3/167 (1%)
 Frame = +1

Query: 229 NIIVDTMTAWDADKIKNALQQNQMIPEAINYVVSTHGHSDHVGNNNLFLNAKHIVGFSIS 408
           +I+VDT   W  + +  AL    + P  +  VV T+GHSDH+GN  LF  A  +V     
Sbjct: 79  HILVDTGGPWAREALLGALAGQGVAPGDVTLVVGTNGHSDHIGNLGLFPGAALLVSHDFC 138

Query: 409 F-REKYFMHPFDKGEEYKINDSVKVIPTPGH-TQSDVT-VIATTRRGEAIAITGDLFERR 579
               +Y  H   +G+  ++   ++V  TPGH  Q DV+ V+A T  G  +A  GD+FER 
Sbjct: 139 LPGGRYLPHGLGEGQPLRLGPGLEVWATPGHGGQRDVSVVVAGTALGTVVA--GDVFERD 196

Query: 580 EDXENPXXXLEAGSEDPVQQMXNRSKVAXXXXWIVPGHGTKXRVTDE 720
            D ++     +A SEDP  Q  +R +V      +VPGHG   RV  E
Sbjct: 197 GDEDS----WQALSEDPAAQERSRKRVLVVADVVVPGHGPPFRVLRE 239


>BC036457-1|AAH36457.1|  385|Homo sapiens paroxysmal nonkinesigenic
           dyskinesia protein.
          Length = 385

 Score = 31.5 bits (68), Expect = 6.1
 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
 Frame = +1

Query: 322 VVSTHGHSDHVGNNNLFLNAKH---IVGFSISFREKYFMHPFDKGEEYKIND-SVKVIPT 489
           ++ TH H DH G N   L+ +H    V  S      Y  HP    +   +    ++ + T
Sbjct: 168 ILCTHKHWDHSGGNR-DLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALAT 226

Query: 490 PGHTQSDVTVI--ATTRRGEAIAITGDL 567
           PGHTQ  +  +      +G +   +GDL
Sbjct: 227 PGHTQGHLVYLLDGEPYKGPSCLFSGDL 254


>BC002937-1|AAH02937.1|  361|Homo sapiens paroxysmal nonkinesiogenic
           dyskinesia protein.
          Length = 361

 Score = 31.5 bits (68), Expect = 6.1
 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
 Frame = +1

Query: 322 VVSTHGHSDHVGNNNLFLNAKH---IVGFSISFREKYFMHPFDKGEEYKIND-SVKVIPT 489
           ++ TH H DH G N   L+ +H    V  S      Y  HP    +   +    ++ + T
Sbjct: 144 ILCTHKHWDHSGGNR-DLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALAT 202

Query: 490 PGHTQSDVTVI--ATTRRGEAIAITGDL 567
           PGHTQ  +  +      +G +   +GDL
Sbjct: 203 PGHTQGHLVYLLDGEPYKGPSCLFSGDL 230


>AY358753-1|AAQ89113.1|  361|Homo sapiens AWQG2491 protein.
          Length = 361

 Score = 31.5 bits (68), Expect = 6.1
 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
 Frame = +1

Query: 322 VVSTHGHSDHVGNNNLFLNAKH---IVGFSISFREKYFMHPFDKGEEYKIND-SVKVIPT 489
           ++ TH H DH G N   L+ +H    V  S      Y  HP    +   +    ++ + T
Sbjct: 144 ILCTHKHWDHSGGNR-DLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALAT 202

Query: 490 PGHTQSDVTVI--ATTRRGEAIAITGDL 567
           PGHTQ  +  +      +G +   +GDL
Sbjct: 203 PGHTQGHLVYLLDGEPYKGPSCLFSGDL 230


>AB033010-1|BAA86498.1|  380|Homo sapiens KIAA1184 protein protein.
          Length = 380

 Score = 31.5 bits (68), Expect = 6.1
 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
 Frame = +1

Query: 322 VVSTHGHSDHVGNNNLFLNAKH---IVGFSISFREKYFMHPFDKGEEYKIND-SVKVIPT 489
           ++ TH H DH G N   L+ +H    V  S      Y  HP    +   +    ++ + T
Sbjct: 163 ILCTHKHWDHSGGNR-DLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALAT 221

Query: 490 PGHTQSDVTVI--ATTRRGEAIAITGDL 567
           PGHTQ  +  +      +G +   +GDL
Sbjct: 222 PGHTQGHLVYLLDGEPYKGPSCLFSGDL 249


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,348,068
Number of Sequences: 237096
Number of extensions: 1904464
Number of successful extensions: 3592
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3586
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16293684080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)