Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_M21
(1228 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 36 0.015
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 36 0.015
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 35 0.020
SPCC569.03 |||DUF1773 family protein 4|Schizosaccharomyces pombe... 33 0.061
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 33 0.11
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 31 0.33
SPBP35G2.03c |sgo1||shugoshin Sgo1|Schizosaccharomyces pombe|chr... 30 0.57
SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces po... 29 1.00
SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein Sap155|Sc... 29 1.3
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 29 1.3
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 29 1.3
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 29 1.7
SPBC12C2.01c ||SPBC17F3.03c|sequence orphan|Schizosaccharomyces ... 29 1.7
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 29 1.7
SPAP14E8.03 |bos1||SNARE Bos1|Schizosaccharomyces pombe|chr 1|||... 29 1.7
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 29 1.7
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 28 2.3
SPCC320.10 |srp72||signal recognition particle subunit Srp72|Sch... 28 3.0
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 28 3.0
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 28 3.0
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 27 4.0
SPBC18H10.07 |||WW domain-binding protein 4 |Schizosaccharomyces... 27 4.0
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 27 5.3
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 27 5.3
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 27 5.3
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 27 7.0
SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protei... 27 7.0
SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces p... 26 9.3
SPCC188.09c |||glycoprotein |Schizosaccharomyces pombe|chr 3|||M... 26 9.3
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 35.5 bits (78), Expect = 0.015
Identities = 23/83 (27%), Positives = 38/83 (45%)
Frame = +2
Query: 470 KHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLEYDEIKVNFDVMKTENEDLQRKTKL 649
K + S E EKI + +E + LKA + + N +++K E DL+ K
Sbjct: 224 KQVSSSIELEKINAEQRLQISELEKLKAAQEERIEKLSSNNRNVEILKEEKNDLESKLYR 283
Query: 650 LEEVTFSLKQKSFELDQVQTDLN 718
EE + E +++QT+LN
Sbjct: 284 FEEYRDKVATLELENEKIQTELN 306
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 35.5 bits (78), Expect = 0.015
Identities = 19/94 (20%), Positives = 45/94 (47%)
Frame = +2
Query: 434 KKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLEYDEIKVNFDVMK 613
K+ + F+ L ++++ +++++ Q+ + + + L LE + +
Sbjct: 598 KENEQNFSSLDTSFKKLNESHQELENNHQTITKQLKDTSSKLQQLQLERANFEQKESTLS 657
Query: 614 TENEDLQRKTKLLEEVTFSLKQKSFELDQVQTDL 715
EN DL+ K LEE SL +K ++D ++ ++
Sbjct: 658 DENNDLRTKLLKLEESNKSLIKKQEDVDSLEKNI 691
Score = 33.9 bits (74), Expect = 0.046
Identities = 20/101 (19%), Positives = 53/101 (52%)
Frame = +2
Query: 395 DFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTL 574
+ +++ N LLE K+K++ +L +++ + D +K+ + ++ LK +L
Sbjct: 805 NMQSQNNTLLESESKLKTDCENLTQQNMTLIDNVQKLMHKHVNQESKVSELKEVNGKLSL 864
Query: 575 EYDEIKVNFDVMKTENEDLQRKTKLLEEVTFSLKQKSFELD 697
+ ++ + +V ++N+ + + L + SL+Q+S +L+
Sbjct: 865 DLKNLRSSLNVAISDNDQILTQLAELSKNYDSLEQESAQLN 905
Score = 31.1 bits (67), Expect = 0.33
Identities = 21/91 (23%), Positives = 41/91 (45%)
Frame = +2
Query: 443 KSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLEYDEIKVNFDVMKTEN 622
K E + ++ ++ +E + + +D L +LS + E+D +K D + +N
Sbjct: 286 KLEKCAINEEDSKLLEELKHNVANYSDAIVHKDKLIEDLSTRISEFDNLKSERDTLSIKN 345
Query: 623 EDLQRKTKLLEEVTFSLKQKSFELDQVQTDL 715
E L+ KLL SLK Q++ ++
Sbjct: 346 EKLE---KLLRNTIGSLKDSRTSNSQLEEEM 373
Score = 27.5 bits (58), Expect = 4.0
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +2
Query: 533 ERDILKANLSVKTLEYDEIKVNFDVMKTENEDLQRKTKLLEEVTFSLKQKSFELDQVQTD 712
E D L++ LSV + EY+ + + + N+ L+ KT L+ + ++++ E DQ +
Sbjct: 1040 ENDDLQSKLSVVSSEYENLLL---ISSQTNKSLEDKTNQLKYIEKNVQKLLDEKDQRNVE 1096
Query: 713 L 715
L
Sbjct: 1097 L 1097
Score = 26.2 bits (55), Expect = 9.3
Identities = 23/100 (23%), Positives = 46/100 (46%)
Frame = +2
Query: 419 LLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLEYDEIKVN 598
L+E SEF +LK + +S + EK+++ ++ + + S E E+K +
Sbjct: 320 LIEDLSTRISEFDNLKSERDTLSIKNEKLEKLLRNTIGSLKDSRTSNSQLEEEMVELKES 379
Query: 599 FDVMKTENEDLQRKTKLLEEVTFSLKQKSFELDQVQTDLN 718
+ ++ D + K E+ SLK +D+ Q +L+
Sbjct: 380 NRTIHSQLTDAESKLSSFEQENKSLKG---SIDEYQNNLS 416
Score = 26.2 bits (55), Expect = 9.3
Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 7/105 (6%)
Frame = +2
Query: 401 KARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLEY 580
K +L +++ + L KH+ + ++KE S + L+++L+V +
Sbjct: 821 KTDCENLTQQNMTLIDNVQKLMHKHVNQESKVSELKEVNGKLSLDLKNLRSSLNVAISDN 880
Query: 581 D-------EIKVNFDVMKTENEDLQRKTKLLEEVTFSLKQKSFEL 694
D E+ N+D ++ E+ L K LE L ++ EL
Sbjct: 881 DQILTQLAELSKNYDSLEQESAQLNSGLKSLEAEKQLLHTENEEL 925
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 35.1 bits (77), Expect = 0.020
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +2
Query: 461 LKDKHLEVS---DEYEKIKETFQSCSNERDILKANLSVKTLEYDEIKVNFDVMKTENEDL 631
LK+ L++S EYE + ++ ++ + L+ L+ D N D+ KTE E L
Sbjct: 29 LKEVELQLSLKEQEYESLSRKSEAAESQLEELEEETKQLRLKAD----NEDIQKTEAEQL 84
Query: 632 QRKTKLLEE 658
RK +LLEE
Sbjct: 85 SRKVELLEE 93
Score = 30.7 bits (66), Expect = 0.43
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +2
Query: 422 LEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLEYDEIKVNF 601
LE + K+ E T+ K + +V E+ + QS ERD ++ L T +Y ++K
Sbjct: 95 LETNDKLLRETTE-KMRQTDVKAEH--FERRVQSLERERDDMEQKLEEMTDKYTKVKAEL 151
Query: 602 DVMKTENEDL 631
D + EDL
Sbjct: 152 DEVHQALEDL 161
>SPCC569.03 |||DUF1773 family protein 4|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 396
Score = 33.5 bits (73), Expect = 0.061
Identities = 18/87 (20%), Positives = 41/87 (47%)
Frame = +2
Query: 440 MKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLEYDEIKVNFDVMKTE 619
+K E ++K + + ++ IK E I+K+++ E E+K +MK +
Sbjct: 185 IKGEMAEMKGEMTVMKNDIASIKGEMAEMKGEMTIMKSDIDSVKGEMAEMKGEMTIMKND 244
Query: 620 NEDLQRKTKLLEEVTFSLKQKSFELDQ 700
+ ++ +T L+ ++K +LD+
Sbjct: 245 IDSVKGETTTLKGEVTAMKDSISQLDR 271
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 32.7 bits (71), Expect = 0.11
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Frame = +2
Query: 503 IKETFQSCSNERDILKANLSVKTLEYDEIKVN-------FDVMKTENEDLQR-KTKLLEE 658
+++ QS +N+ + + +SV E + +K N FD + TEN+ L+R ++L E+
Sbjct: 75 LEQQLQSSNNQAEESRNLISVLRNENESLKTNLENQNKRFDALTTENQSLRRANSELQEQ 134
Query: 659 VTFSLKQKSFELDQVQ 706
+ +Q S DQ++
Sbjct: 135 SKIASEQLSIAKDQIE 150
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 31.1 bits (67), Expect = 0.33
Identities = 27/127 (21%), Positives = 56/127 (44%), Gaps = 21/127 (16%)
Frame = +2
Query: 401 KARFNDLLEKHKKMKSEFTDLKD-------KHLEVSDEYEKIKETFQSCS---------- 529
++ D +E+H K+ + D+K+ K+ ++ E EK K S +
Sbjct: 697 ESEIKDFIEEHSKLTKQLDDIKNQFGIISSKNRDLLSELEKSKSLNNSLAALESKNKKLE 756
Query: 530 NERDILKANLSVKTLEYDEIKVNFD----VMKTENEDLQRKTKLLEEVTFSLKQKSFELD 697
N+ ++L L+ K + + K K N++L K ++ ++ L ++S L
Sbjct: 757 NDLNLLTEKLNKKNADTESFKNTIREAELSKKALNDNLGNKENIISDLKNKLSEESTRLQ 816
Query: 698 QVQTDLN 718
++Q+ LN
Sbjct: 817 ELQSQLN 823
>SPBP35G2.03c |sgo1||shugoshin Sgo1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 319
Score = 30.3 bits (65), Expect = 0.57
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Frame = +2
Query: 401 KARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVK--TL 574
+ARF + + +K+ F +++ H ++S +K + CS+ D L+AN+ + T
Sbjct: 68 EARFRNQSQTEDLLKNFFPEIQTIHKKISQVQSLLKIIEKKCSS--DFLEANVKSQFTTC 125
Query: 575 EYDEIKVNFDVMKTENEDLQRKTKLLEEVTFSLKQKSFELDQ 700
E + K ++ ++ K LE V+F+ + KS E Q
Sbjct: 126 ENKDSKEDYQIL---------HNKRLEYVSFNDELKSLETGQ 158
>SPBC1734.08 |hse1||STAM like protein Hse1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 373
Score = 29.5 bits (63), Expect = 1.00
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 419 LLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERD 541
L+EK+ K E DL ++ L +YEK+ E QS S R+
Sbjct: 334 LIEKYASQKEELMDLNERLLVARRDYEKLYE--QSMSEMRN 372
>SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein
Sap155|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1188
Score = 29.1 bits (62), Expect = 1.3
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +2
Query: 344 VTKVEKRSTVAPKIPPYDFKARFNDLLE-KHKKMKSEFTDLKDKHLEVSDEYEKIKETFQ 520
+ V S++ P P D R +L +H+K++ DL K + EY +E +
Sbjct: 884 IVSVVGMSSMQP--PIRDLLPRLTPILRNRHEKVQENTIDLVGKIADRGSEYVSAREWMR 941
Query: 521 SCSNERDILKAN 556
C D+LKA+
Sbjct: 942 ICFELIDMLKAH 953
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 29.1 bits (62), Expect = 1.3
Identities = 40/185 (21%), Positives = 83/185 (44%), Gaps = 11/185 (5%)
Frame = +2
Query: 98 VETIRKMSKIPKLPTISKEN--RFGQFHNRPISRTIANGLSDVDKKNLITNHTRPLRNGP 271
+ET + S +PK P K+N RF + + IS + + L + K I+ + ++
Sbjct: 1 METSKNPSDLPKKPANVKKNRRRFQKSQKKSISPSSGSELPNF--KTTISQNNEEVKTS- 57
Query: 272 PVSAAAPRIKRSATAP---SSTTIPNNVTK--VEKRSTVAPKIPPYDFKARFNDLLE--- 427
+ + + SA+AP ++++ NV+K K S + + D + R + E
Sbjct: 58 -LKEDSSKFHPSASAPIFVPTSSVQLNVSKNNGHKASDIVDAVSSKDEELRKHAKGEGKR 116
Query: 428 -KHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLEYDEIKVNFD 604
K++K S+ ++ + L+ S+ ++ + S +N+ + + S EIK D
Sbjct: 117 SKNRKRSSKHSEKQAVDLKSSNSSQETSSSKGSVNNKSERSREAKSRMPKNSKEIKKGLD 176
Query: 605 VMKTE 619
+ K +
Sbjct: 177 LSKLD 181
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 29.1 bits (62), Expect = 1.3
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Frame = +2
Query: 416 DLLEKHKKMKSEFTDLKDKHLEVSDEYEKIK------ETFQSCSNERDILKANLSVKTLE 577
+LL+KH+ S + D+ E+ D Y K + F+ + + AN + TL+
Sbjct: 491 ELLDKHQTALSSVENRLDEISEIVDSYHKYSGVRTKLQVFEENKTNKSAILAN-QLMTLK 549
Query: 578 YDEIKVNFDVMKTENEDLQRKTKLLEEVTFSLKQK 682
+V +K ++ + KL+E+V L++K
Sbjct: 550 SSFSEVMSYELKDDDNYNEELDKLVEDVRKKLQEK 584
Score = 27.9 bits (59), Expect = 3.0
Identities = 19/102 (18%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Frame = +2
Query: 407 RFNDLLEKHKKMKSEFTD---LKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLE 577
R + + K +++ E T+ L+D+ + ++EYE+ T + ++ DI+ ++ +
Sbjct: 231 RISCIRSKVEELDQEITETARLQDELFKSTEEYEQQMITIRHLESQSDIINTTINDLKSQ 290
Query: 578 YDEIKVNFDVMKTENEDLQRKTKLLEEVTFSLKQKSFELDQV 703
+ + ++ + + K K +E+ SL++K +L+ +
Sbjct: 291 MTITDESSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESL 332
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 28.7 bits (61), Expect = 1.7
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +2
Query: 428 KHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNER--DILKANLSVKTLEYDEIKVNF 601
+++ KS+ DL ++ V D+ K+ +F+ NE+ + LS T EYD +
Sbjct: 933 RYRIQKSKVDDLHEQLKFVKDKLNKM--SFKKKKNEQRSQSFQVELSNLTSEYDTTTESI 990
Query: 602 DVMKTENEDLQR 637
+KTE + L +
Sbjct: 991 ATLKTELQSLNK 1002
>SPBC12C2.01c ||SPBC17F3.03c|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 318
Score = 28.7 bits (61), Expect = 1.7
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 395 DFKARFNDLLEKHKKMKSEFTDLKD 469
DFK+RF+ E H K+ +E ++KD
Sbjct: 116 DFKSRFSQYRESHLKLLNELQNVKD 140
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 28.7 bits (61), Expect = 1.7
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +2
Query: 545 LKANLSVKTLEYDEIKVNFDVMKTENEDLQRKTKLLEEVTFSLKQKSFELDQVQTD 712
L+ L V T EY++++ +KT+N + R L +E+ + + ++Q +TD
Sbjct: 685 LQLKLQVVTSEYEKLETQLKDLKTQNANFHR---LEQEIQLKQHELTLLIEQRETD 737
>SPAP14E8.03 |bos1||SNARE Bos1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 235
Score = 28.7 bits (61), Expect = 1.7
Identities = 21/105 (20%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Frame = +2
Query: 368 TVAPKIPPYDFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIK---ETFQSCSNER 538
+++ I YD + + K KK + + KH+++ ++++++K N +
Sbjct: 49 SLSRSIDDYDSMVQRELVPAKKKKATIRIQEFRQKHVQLLEKFDELKAHVRDIAQAKNRK 108
Query: 539 DILKANLSVKTLE--YDEIKVNFDVMKTENEDLQRKTKLLEEVTF 667
++L V +L+ Y + ++++ + DL R+ LL+E F
Sbjct: 109 ELLGRRGYVNSLDSPYGNSTTDAEIVEGPS-DLSRQDGLLKEHDF 152
>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 566
Score = 28.7 bits (61), Expect = 1.7
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Frame = +2
Query: 464 KDKHLEVSD--EYEKIKETFQSCSNERDILKANLSVKTLEYDEIKVNFDVMKTENEDLQR 637
KD +E SD + ++K +F N D+L + E+KV+F+ K E++DL +
Sbjct: 261 KDGQVEKSDCSKNTQLKPSFLP-KNTDDLLNGT-DDNNIVLREVKVSFENEKIESDDLDK 318
Query: 638 KTKLLEEVTFSLKQKSFELDQVQTD 712
++ E ++ ++S E V+ D
Sbjct: 319 NEEISEGEEYTPIEESKEPITVRRD 343
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 28.3 bits (60), Expect = 2.3
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Frame = +2
Query: 419 LLEKHKKMKSEFTDLKDKHLEVSDEY--------EKIKETFQSCSNERDILKANLSVKTL 574
L +K ++ + TD+KD+ L+VS+E +K+ +F+ SNE+ L+ L +L
Sbjct: 661 LNDKISVLQRQLTDVKDE-LDVSEEEREEAIVAGQKLSASFELMSNEKQALE--LKYSSL 717
Query: 575 EYDEIKVNFDVMKTENEDLQRKTKLLEE 658
+ + I + + E E + KL EE
Sbjct: 718 KNELINAQNLLDRREEELSELSKKLFEE 745
>SPCC320.10 |srp72||signal recognition particle subunit
Srp72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 561
Score = 27.9 bits (59), Expect = 3.0
Identities = 19/39 (48%), Positives = 20/39 (51%)
Frame = +2
Query: 266 GPPVSAAAPRIKRSATAPSSTTIPNNVTKVEKRSTVAPK 382
G PVSAA IKRS A SS N+ K KR PK
Sbjct: 491 GVPVSAAIGPIKRSVEANSS----NSSKKTRKRRKPTPK 525
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 27.9 bits (59), Expect = 3.0
Identities = 24/125 (19%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Frame = +2
Query: 296 IKRSATAPSSTTIPNNVTKVE-KRSTVAPKIPPY--DFKARFNDLLEKHKKMKSEFTDLK 466
++ S + + IP + + K + PK+ K +DL + + + + +D+K
Sbjct: 478 VRTSVPSQLAAPIPQVASAEQLKLAAEVPKLESQLSQVKKSNDDLQKSSRDVAANLSDVK 537
Query: 467 DKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLEYDEIKVNFDVMKTENEDLQRKTK 646
K E+ Y++ + S + + KA EY ++ + ++ +N ++K +
Sbjct: 538 AKVSEIRKAYDEELAKAKQISLDIETNKAQTEQVNREYSILEATLNALQKQN---KQKGE 594
Query: 647 LLEEV 661
+LE+V
Sbjct: 595 VLEQV 599
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 27.9 bits (59), Expect = 3.0
Identities = 43/184 (23%), Positives = 72/184 (39%), Gaps = 12/184 (6%)
Frame = +2
Query: 107 IRKMSKIPKLPTISKENRFGQFHNRPISRTIANGLSDVDKKNLITNHTRPLRNGPPVSAA 286
+ K S +P + K + F +I G VD + N P +
Sbjct: 357 LNKTSSNLSIPVLQKPSNFHSSSTELSDNSIHQGRRAVDP---VVNQNNPSNFEEMIMNK 413
Query: 287 A---PRIKRSATAPSSTT-IPNNVTKVEKRSTVAPKIPPYDFKARF------NDL-LEKH 433
P I + SS T + T +E + P FK + N L LE
Sbjct: 414 LNKLPTIDKQILGTSSLTHFQDKTTAIEHSINKSNSKQPPRFKFQLPPRPTSNTLPLEPE 473
Query: 434 KKMKSEFTDLKDKHLEVSDEYEKIKETFQSC-SNERDILKANLSVKTLEYDEIKVNFDVM 610
+++ + ++ D + V + K +TFQ SNE + + AN K+L + K++FD
Sbjct: 474 EELVTRYSVSSDGNT-VDEAITKQSQTFQLVNSNEFNEVNANDVHKSLRQNCAKLDFDDS 532
Query: 611 KTEN 622
K++N
Sbjct: 533 KSKN 536
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 27.5 bits (58), Expect = 4.0
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +2
Query: 356 EKRSTVAPKIPPYDFKARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEK 502
+K TV + +++KA + + + MK DL+ + +V D YE+
Sbjct: 42 QKTKTVEAQKDDFEYKAMISAQINEMALMKQTVMDLEMQQSKVKDRYEE 90
>SPBC18H10.07 |||WW domain-binding protein 4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 224
Score = 27.5 bits (58), Expect = 4.0
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 296 IKRSATAPSSTTIPNNVTKVEKRSTVAPKIPPYDFKARFND 418
I +SATA +++ + + + EK PK+ P KA +D
Sbjct: 63 IPKSATATTASAVSSELASYEKPKKEHPKLRPSKKKATLDD 103
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 27.1 bits (57), Expect = 5.3
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Frame = +2
Query: 416 DLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDILKANLSVKTLE------ 577
D+ EK KK++S L+ + ++ ++ KET + S +R + + + LE
Sbjct: 114 DIAEKLKKLESHIEALRKVYDDLYKKFSSEKETLLN-SVKRAKVSYHEACDDLESARQKN 172
Query: 578 --YDEIKVNFDVMKTENEDLQRKTK-LLEEVTFSLKQKSFELDQVQTDLN 718
Y E K ++ +E++ L +K K LL + ++ ++ F + + T LN
Sbjct: 173 DKYREQKTQRNLKLSESDMLDKKNKYLLRMLVYNAHKQKFYNETLPTLLN 222
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 27.1 bits (57), Expect = 5.3
Identities = 24/110 (21%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Frame = +2
Query: 401 KARFNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNERDIL--KANLSVKTL 574
K R +++E ++K + + ++ + + + ER I K + +T
Sbjct: 827 KKRDAEIIELKYELKKQQNSKSEVERDLVETNNSLTAVENLLTTERAIALDKEEILRRTQ 886
Query: 575 E-YDEIKVNFDVMKTENEDLQRKTKLLEEVTFSLKQKSFE-LDQVQTDLN 718
E I+ +F K +NE+LQR++ L+++ L+ + E +V+T L+
Sbjct: 887 ERLANIEDSFSETKQQNENLQRESASLKQINNELESELLEKTSKVETLLS 936
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 27.1 bits (57), Expect = 5.3
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +2
Query: 575 EYDEIKVNFDVMKTENEDLQRKTKLLEEVT----FSLKQKSFELDQVQ 706
+ D ++ + + NE + + TK+LEEV+ +SLK++ F VQ
Sbjct: 591 DLDGAEIQEETLIKANETIDQLTKMLEEVSDQLRYSLKERDFFRSLVQ 638
>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +2
Query: 410 FNDLLEKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQSCSNE 535
F+DL+ + + E ++L + L V + K+K + S NE
Sbjct: 68 FSDLIWTNGSIIKELSELSSQTLSVQSQLLKVKNSIDSYKNE 109
>SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protein
Tgc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 26.6 bits (56), Expect = 7.0
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 530 NERDILKANLSVKTLEYDEIKVNFDVMKTENEDLQRKTKLLEEVTFSLKQKSFELD 697
N + + L VK+ + E K N + K ENE ++ V+ S + K+ E+D
Sbjct: 279 NGKQVGDLTLVVKSAVFREDKQNDENEKNENEPIEASESAPTNVSDSTEPKASEVD 334
>SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 595
Score = 26.2 bits (55), Expect = 9.3
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = +2
Query: 425 EKHKKMKSEFTDLKDKHLEVSDEYEKIKETFQS 523
E+ K + DLK+KH ++ +++ + E F++
Sbjct: 563 EELGKTLKQLNDLKEKHAQLQTKWKSVSEMFRN 595
>SPCC188.09c |||glycoprotein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 609
Score = 26.2 bits (55), Expect = 9.3
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 269 PPVSAAAPRIKRSATAPSSTTIPNNVT 349
PPVSA + SAT+ SS+T P +T
Sbjct: 23 PPVSAKFAKRVLSATSSSSSTCPEFIT 49
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,663,860
Number of Sequences: 5004
Number of extensions: 48763
Number of successful extensions: 270
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 266
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 665388788
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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