Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_M19
         (1209 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0409 - 20503480-20503678,20504522-20504717,20504805-205048...   258   6e-69
01_01_0745 + 5769150-5769152,5769268-5769375,5769812-5769854,576...   258   6e-69
05_02_0095 + 6564703-6564705,6564848-6564955,6565153-6565195,656...   194   9e-50
02_02_0195 + 7676014-7676094,7676111-7676218,7676307-7676349,767...   173   2e-43
02_02_0196 + 7685933-7685961,7686086-7686284                           88   1e-17
03_01_0175 - 1413599-1413934,1414326-1414526,1414660-1414962           47   3e-05
11_04_0418 - 17443989-17444082,17445153-17445406,17445709-174457...    33   0.60 
06_03_1403 + 29923503-29923821,29924269-29924405,29924495-299246...    32   1.0  
01_06_0514 + 29955129-29955796,29955903-29956023                       29   9.7  

>06_03_0409 -
           20503480-20503678,20504522-20504717,20504805-20504847,
           20505632-20505739,20505848-20505850
          Length = 182

 Score =  258 bits (632), Expect = 6e-69
 Identities = 123/163 (75%), Positives = 137/163 (84%)
 Frame = +2

Query: 152 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 331
           N MR + ++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKARYTVRSFGIRRNEKIA
Sbjct: 9   NPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIA 68

Query: 332 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLD 511
            + TVRG KA ++LE GLKV+EYEL R NFS TG FGFGIQEHIDLGIKYDPS GIYG+D
Sbjct: 69  CYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMD 128

Query: 512 FYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 640
           FYVVL R G+ VA RRR   +VG  HR+TKEDAMKWFQ KY+G
Sbjct: 129 FYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEG 171


>01_01_0745 +
           5769150-5769152,5769268-5769375,5769812-5769854,
           5769945-5770140,5770836-5771034
          Length = 182

 Score =  258 bits (632), Expect = 6e-69
 Identities = 123/163 (75%), Positives = 137/163 (84%)
 Frame = +2

Query: 152 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 331
           N MR + ++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKARYTVRSFGIRRNEKIA
Sbjct: 9   NPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIA 68

Query: 332 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLD 511
            + TVRG KA ++LE GLKV+EYEL R NFS TG FGFGIQEHIDLGIKYDPS GIYG+D
Sbjct: 69  CYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMD 128

Query: 512 FYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 640
           FYVVL R G+ VA RRR   +VG  HR+TKEDAMKWFQ KY+G
Sbjct: 129 FYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEG 171


>05_02_0095 +
           6564703-6564705,6564848-6564955,6565153-6565195,
           6565303-6565409,6566310-6566395,6566396-6566594
          Length = 181

 Score =  194 bits (474), Expect = 9e-50
 Identities = 102/165 (61%), Positives = 119/165 (72%), Gaps = 2/165 (1%)
 Frame = +2

Query: 152 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 331
           N MR + ++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKARYTVRSFGIRRNEKIA
Sbjct: 9   NPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIA 68

Query: 332 VHCTVRGAKAEEILERGLKVREYELRRDNF--SATGNFGFGIQEHIDLGIKYDPSIGIYG 505
            + TVRG KA ++LE GLK+       DN   S T +         +   +YDPS GIYG
Sbjct: 69  CYVTVRGEKAMQLLESGLKIIRIV---DNLIPSVTRSTRAKRINLSNQCFRYDPSTGIYG 125

Query: 506 LDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 640
           +DFYVVL R G+ VA RRR   +VG  HR+TKEDAMKWFQ KY+G
Sbjct: 126 MDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEG 170


>02_02_0195 +
           7676014-7676094,7676111-7676218,7676307-7676349,
           7676449-7676648
          Length = 143

 Score =  173 bits (421), Expect = 2e-43
 Identities = 85/109 (77%), Positives = 94/109 (86%)
 Frame = +2

Query: 152 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 331
           N MR + ++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKARYTVRSFGIRRNEKIA
Sbjct: 35  NPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIA 94

Query: 332 VHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIK 478
            + TVRG KA ++LE GLKV+EYEL R NFS TG FGFGIQEHIDLGIK
Sbjct: 95  CYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIK 143


>02_02_0196 + 7685933-7685961,7686086-7686284
          Length = 75

 Score = 88.2 bits (209), Expect = 1e-17
 Identities = 38/54 (70%), Positives = 43/54 (79%)
 Frame = +2

Query: 479 YDPSIGIYGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 640
           YDPS GIYG+DFYVVL R G+ VA RRR   +VG  HR+TKEDAMKWFQ KY+G
Sbjct: 11  YDPSTGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEG 64


>03_01_0175 - 1413599-1413934,1414326-1414526,1414660-1414962
          Length = 279

 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 10/134 (7%)
 Frame = +2

Query: 152 NVMRNLHIRKLCLNICVG-ESGDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 322
           NV +   + K+ +N  +G E+G+   L  A K L  +TGQ PV +KA+ +V SF IR   
Sbjct: 98  NVHQVPKVEKIVVNCGLGAEAGNSKGLESAMKDLAMITGQWPVKTKAKKSVASFKIREGN 157

Query: 323 KIAVHCTVRGAKAEEILER----GL-KVREY-ELRRDNFSATGNFGFGIQEH-IDLGIKY 481
            I +  T+RG      L+R    GL +  ++  +  ++F   GNF  G+++  +   I Y
Sbjct: 158 TIGIAVTLRGRVMFNFLDRLINLGLPRTMDFLGVNPNSFDGHGNFTIGLRDQGVFPEIPY 217

Query: 482 DPSIGIYGLDFYVV 523
           +      G+D  +V
Sbjct: 218 EVGGKKNGMDVCIV 231


>11_04_0418 -
           17443989-17444082,17445153-17445406,17445709-17445783,
           17446156-17446377,17446789-17446941,17447031-17447167,
           17447615-17447933
          Length = 417

 Score = 32.7 bits (71), Expect = 0.60
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = +2

Query: 320 EKIAVHCTVRGAKAEEILERGLK 388
           EKIA + TVRG KA ++LE GLK
Sbjct: 280 EKIACYVTVRGEKAMQLLESGLK 302


>06_03_1403 +
           29923503-29923821,29924269-29924405,29924495-29924647,
           29924690-29925280,29925523-29925597,29925901-29926169,
           29927238-29927331
          Length = 545

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = +2

Query: 320 EKIAVHCTVRGAKAEEILERGLK 388
           EKIA + TVRG KA ++LE GLK
Sbjct: 403 EKIACYVTVRGEKAMQLLEIGLK 425


>01_06_0514 + 29955129-29955796,29955903-29956023
          Length = 262

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = -1

Query: 435 LPVAEKLSRRNSYSL-TFKPLSRISSALAPRTVQWTAIFSLRRIPKDRTVYLALENTGCC 259
           L V + + R +  S+ T +P+  + S LA   V  +  +  +R+ +DR +Y+ L     C
Sbjct: 171 LEVCKGVPRSSKKSIFTIEPIGELPSTLAC-AVSRSCCYCRKRLQQDRDIYMYLGEKAFC 229

Query: 258 PVSC 247
              C
Sbjct: 230 SNEC 233


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,721,729
Number of Sequences: 37544
Number of extensions: 369745
Number of successful extensions: 957
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3701409336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)