Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_M19
         (1209 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    29   0.11 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    27   0.44 
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    24   3.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   7.1  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   7.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   7.1  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 28.7 bits (61), Expect = 0.11
 Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
 Frame = +2

Query: 191 NICVGESGDRLTRAAKVLEQL--TGQQPVFSKARYTVR--SFGIRRNEKIAVHCTVRGAK 358
           N+    SGD    AA    ++  T +  V    R+ V      + RN+ +A+HC  +G  
Sbjct: 678 NLAAEHSGDYTCVAANPAAEVRYTAKLQVKVPPRWIVEPTDVSVERNKHVALHCQAQGVP 737

Query: 359 AEEILER---GLKVREY-ELRRDNFSATGNFGFGIQEHI 463
              I+ +   G K  EY ELR   ++   + G  + +H+
Sbjct: 738 TPTIVWKKATGSKSGEYEELRERAYTKILSNGTLLLQHV 776


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 26.6 bits (56), Expect = 0.44
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
 Frame = +2

Query: 308 IRRNEKIAVHCTVRGAKAEEILER---GLKVREY-ELRRDNFSATGNFGFGIQEHI 463
           + RN+ +A+HC  +G     I+ +   G K  EY ELR   ++   + G  + +H+
Sbjct: 717 VERNKHVALHCQAQGVPTPTIVWKKATGSKSGEYEELRERAYTKILSNGTLLLQHV 772


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
            ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = +2

Query: 461  IDLGIKYDP-SIGIYGL--DFYVVLGRPGFNVAHRRRKTGKVG 580
            + +GI + P + G+ G     Y + G    NVA R   TGKVG
Sbjct: 894  LKMGINHGPVTAGVIGARKPHYDIWGNT-VNVASRMESTGKVG 935


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 24/81 (29%), Positives = 34/81 (41%)
 Frame = +2

Query: 359 AEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPG 538
           AEE   +G+    Y + R+  S+T   GF ++     GIK   + G    DF     R  
Sbjct: 386 AEERRVQGVTKPRYMVWRETISSTATLGFRVE-----GIKL--AHGGSSKDFKTTRTREQ 438

Query: 539 FNVAHRRRKTGKVGFPHRLTK 601
              A RR      G+PH + K
Sbjct: 439 VTEALRRFVE---GYPHAVPK 456


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 24/81 (29%), Positives = 34/81 (41%)
 Frame = +2

Query: 359 AEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPG 538
           AEE   +G+    Y + R+  S+T   GF ++     GIK   + G    DF     R  
Sbjct: 301 AEERRVQGVTKPRYMVWRETISSTATLGFRVE-----GIKL--AHGGSSKDFKTTRTREQ 353

Query: 539 FNVAHRRRKTGKVGFPHRLTK 601
              A RR      G+PH + K
Sbjct: 354 VTEALRRFVE---GYPHAVPK 371


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 24/81 (29%), Positives = 34/81 (41%)
 Frame = +2

Query: 359 AEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPG 538
           AEE   +G+    Y + R+  S+T   GF ++     GIK   + G    DF     R  
Sbjct: 620 AEERRVQGVTKPRYMVWRETISSTATLGFRVE-----GIKL--AHGGSSKDFKTTRTREQ 672

Query: 539 FNVAHRRRKTGKVGFPHRLTK 601
              A RR      G+PH + K
Sbjct: 673 VTEALRRFVE---GYPHAVPK 690


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,233
Number of Sequences: 438
Number of extensions: 4054
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 41331843
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)