Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_M18
         (1217 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   1.1  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   7.8  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   7.8  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.1 bits (57), Expect = 1.1
 Identities = 12/31 (38%), Positives = 12/31 (38%)
 Frame = +1

Query: 853 PXXXGGXXXKXXPXXXXGGGGXPPPXXGGGG 945
           P   GG      P    G  G P P  GGGG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGGGG 230



 Score = 25.4 bits (53), Expect = 3.4
 Identities = 21/89 (23%), Positives = 25/89 (28%)
 Frame = +1

Query: 904  GGGGXPPPXXGGGGXXXXXXXXXXXXXGGKKKXXXXXXXXGXXXXXXXXGGGXXKKKXGX 1083
            GGGG      GGGG                 K        G        GGG      G 
Sbjct: 168  GGGGG---GGGGGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGGGGSSGGPGP 224

Query: 1084 GGGXXXXKKKXXXXXXXXKKKXXXGGGGG 1170
            GGG     +         +++    GGGG
Sbjct: 225  GGGGGGGGRDRDHRDRDREREGGGNGGGG 253


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 7.8
 Identities = 13/37 (35%), Positives = 13/37 (35%), Gaps = 1/37 (2%)
 Frame = +2

Query: 818 PPPKXKXPXXFXXGXXGGXXKKXPP-XXXXGGGGXPP 925
           PPP    P     G  GG     PP     G GG  P
Sbjct: 588 PPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAP 624


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 24.2 bits (50), Expect = 7.8
 Identities = 17/75 (22%), Positives = 26/75 (34%)
 Frame = +2

Query: 581  GGXXGXXKKXGPPXXKXF*KXPXGGXKKXGPPXXKKKKXPPPXXGGXXXXXKXXGXNPKK 760
            GG  G  +  G P  +           + G    K+K+      GG     +  G   +K
Sbjct: 922  GGGSGGEEGSGAPKERKRKGEKKPRKSQGGGGSRKRKEKARRGSGGDSDSEEEEGEGSRK 981

Query: 761  KKXXGXXGGGXXXKK 805
            +K  G  GG    +K
Sbjct: 982  RKKKGASGGQKKRQK 996


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.308    0.148    0.467 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,130
Number of Sequences: 2352
Number of extensions: 10801
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 138565233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)