Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_M18
(1217 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 37 0.033
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 37 0.033
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 37 0.033
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 33 0.31
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 0.94
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 32 0.94
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 32 0.94
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 3.8
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 5.0
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 29 5.0
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 5.0
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 29 6.7
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 29 6.7
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 36.7 bits (81), Expect = 0.033
Identities = 24/78 (30%), Positives = 24/78 (30%), Gaps = 2/78 (2%)
Frame = -1
Query: 1091 PPPXPXF--FXXXPPPXXXXXXXXPXXXXXXXFFFXPPXXXXXXXXXXXFXPPPPXXGGG 918
PPP P PPP P PP PPPP GG
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPP----PPPPGGLPPISGGPPPPPPPPGGC 768
Query: 917 XPPPPXXXXGXFFXXXPP 864
PPPP G F PP
Sbjct: 769 PPPPPPPPPGGFKGGPPP 786
Score = 32.3 bits (70), Expect = 0.71
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 942 PPXXXXGGXPPPPXXXXGGXFXXXPPXXP 856
PP GG PPPP G F PP P
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 29.5 bits (63), Expect = 5.0
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 5/41 (12%)
Frame = -1
Query: 944 PPPPXXGG-----GXPPPPXXXXGXFFXXXPPXXXGXXXXG 837
PPPP GG G PPPP G PP G G
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 28.7 bits (61), Expect = 8.8
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 2/77 (2%)
Frame = -1
Query: 1091 PPPXPXFFXXXPPPXXXXXXXXPXXXXXXXFFFXPPXXXXXXXXXXXFXPPPPXXG--GG 918
PPP P PP P PP PPPP G GG
Sbjct: 726 PPPPPP--PGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 917 XPPPPXXXXGXFFXXXP 867
PPPP G F P
Sbjct: 784 PPPPP--PPGMFAPMAP 798
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 36.7 bits (81), Expect = 0.033
Identities = 24/78 (30%), Positives = 24/78 (30%), Gaps = 2/78 (2%)
Frame = -1
Query: 1091 PPPXPXF--FXXXPPPXXXXXXXXPXXXXXXXFFFXPPXXXXXXXXXXXFXPPPPXXGGG 918
PPP P PPP P PP PPPP GG
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPP----PPPPGGLPPISGGPPPPPPPPGGC 768
Query: 917 XPPPPXXXXGXFFXXXPP 864
PPPP G F PP
Sbjct: 769 PPPPPPPPPGGFKGGPPP 786
Score = 32.3 bits (70), Expect = 0.71
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 942 PPXXXXGGXPPPPXXXXGGXFXXXPPXXP 856
PP GG PPPP G F PP P
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 29.5 bits (63), Expect = 5.0
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 5/41 (12%)
Frame = -1
Query: 944 PPPPXXGG-----GXPPPPXXXXGXFFXXXPPXXXGXXXXG 837
PPPP GG G PPPP G PP G G
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 28.7 bits (61), Expect = 8.8
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 2/77 (2%)
Frame = -1
Query: 1091 PPPXPXFFXXXPPPXXXXXXXXPXXXXXXXFFFXPPXXXXXXXXXXXFXPPPPXXG--GG 918
PPP P PP P PP PPPP G GG
Sbjct: 726 PPPPPP--PGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Query: 917 XPPPPXXXXGXFFXXXP 867
PPPP G F P
Sbjct: 784 PPPPP--PPGMFAPMAP 798
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 36.7 bits (81), Expect = 0.033
Identities = 24/78 (30%), Positives = 24/78 (30%), Gaps = 2/78 (2%)
Frame = -1
Query: 1091 PPPXPXF--FXXXPPPXXXXXXXXPXXXXXXXFFFXPPXXXXXXXXXXXFXPPPPXXGGG 918
PPP P PPP P PP PPPP GG
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPP----PPPPGGLPPISGGPPPPPPPPGGC 351
Query: 917 XPPPPXXXXGXFFXXXPP 864
PPPP G F PP
Sbjct: 352 PPPPPPPPPGGFKGGPPP 369
Score = 32.3 bits (70), Expect = 0.71
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 942 PPXXXXGGXPPPPXXXXGGXFXXXPPXXP 856
PP GG PPPP G F PP P
Sbjct: 343 PPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 29.5 bits (63), Expect = 5.0
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 5/41 (12%)
Frame = -1
Query: 944 PPPPXXGG-----GXPPPPXXXXGXFFXXXPPXXXGXXXXG 837
PPPP GG G PPPP G PP G G
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Score = 28.7 bits (61), Expect = 8.8
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 2/77 (2%)
Frame = -1
Query: 1091 PPPXPXFFXXXPPPXXXXXXXXPXXXXXXXFFFXPPXXXXXXXXXXXFXPPPPXXG--GG 918
PPP P PP P PP PPPP G GG
Sbjct: 309 PPPPPP--PGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Query: 917 XPPPPXXXXGXFFXXXP 867
PPPP G F P
Sbjct: 367 PPPPP--PPGMFAPMAP 381
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 33.5 bits (73), Expect = 0.31
Identities = 18/46 (39%), Positives = 20/46 (43%)
Frame = +1
Query: 460 FFXXGGGGGGXXXKKKXPPPXGGXXGXFFXHXGXXGXXKKGGGXGG 597
FF GGGGGG GG G + G G + GGG GG
Sbjct: 50 FFGGGGGGGGGGGGGGFGGGNGGFGGGGGGNYGGGGGNQGGGGGGG 95
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.9 bits (69), Expect = 0.94
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -1
Query: 950 FXPPPPXXGGGXPPPPXXXXGXFFXXXPPXXXG 852
F PPPP GG PPPP G PP G
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGG--IPPPPPMMGG 103
Score = 29.9 bits (64), Expect = 3.8
Identities = 21/68 (30%), Positives = 21/68 (30%)
Frame = -1
Query: 1091 PPPXPXFFXXXPPPXXXXXXXXPXXXXXXXFFFXPPXXXXXXXXXXXFXPPPPXXGGGXP 912
PPP P F PPP P PP PPPP G P
Sbjct: 66 PPPVPNGFI--PPPPGPGGIPPPPPMFAGGIPPPPPMMGG-------IPPPPPMFGAPPP 116
Query: 911 PPPXXXXG 888
PPP G
Sbjct: 117 PPPPSGLG 124
Score = 29.9 bits (64), Expect = 3.8
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2
Query: 955 GXFXPPXXXXGGVPPPPP 902
G PP GG+PPPPP
Sbjct: 92 GGIPPPPPMMGGIPPPPP 109
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 31.9 bits (69), Expect = 0.94
Identities = 20/69 (28%), Positives = 21/69 (30%)
Frame = -1
Query: 989 PPXXXXXXXXXXXFXPPPPXXGGGXPPPPXXXXGXFFXXXPPXXXGXXXXGVFXXGGXGX 810
PP F PPPP G PPP F PP + GG
Sbjct: 291 PPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGP-Y 349
Query: 809 XXFFXXXPP 783
FF PP
Sbjct: 350 PPFFPPPPP 358
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 31.9 bits (69), Expect = 0.94
Identities = 20/69 (28%), Positives = 21/69 (30%)
Frame = -1
Query: 989 PPXXXXXXXXXXXFXPPPPXXGGGXPPPPXXXXGXFFXXXPPXXXGXXXXGVFXXGGXGX 810
PP F PPPP G PPP F PP + GG
Sbjct: 291 PPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGP-Y 349
Query: 809 XXFFXXXPP 783
FF PP
Sbjct: 350 PPFFPPPPP 358
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.9 bits (64), Expect = 3.8
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +1
Query: 472 GGGGGGXXXKKKXPPPX--GGXXGXFFXHXGXXGXXKKGGGXGG 597
GGGG G PPP GG G G G GGG GG
Sbjct: 44 GGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGG 87
Score = 29.9 bits (64), Expect = 3.8
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 475 GGGGGXXXKKKXPPPXGGXXGXFFXHXGXXGXXKKGGGXGG 597
GGGGG PPP G G G GGG GG
Sbjct: 100 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGG 140
Score = 29.1 bits (62), Expect = 6.7
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +1
Query: 472 GGGGGGXXXKKKXPPPXGGXXGXFFXHXGXXGXXKKGGGXGGKXKXXXPP 621
GGGGGG GG G G G GGG GG PP
Sbjct: 66 GGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPP 115
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.5 bits (63), Expect = 5.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 944 PPPPXXGGGXPPPP 903
PPPP G G PPPP
Sbjct: 33 PPPPPKGTGTPPPP 46
Score = 29.5 bits (63), Expect = 5.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 944 PPPPXXGGGXPPPP 903
PPPP G G PPPP
Sbjct: 64 PPPPPKGTGTPPPP 77
Score = 29.5 bits (63), Expect = 5.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 944 PPPPXXGGGXPPPP 903
PPPP G G PPPP
Sbjct: 96 PPPPPKGTGTPPPP 109
Score = 29.5 bits (63), Expect = 5.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 944 PPPPXXGGGXPPPP 903
PPPP G G PPPP
Sbjct: 127 PPPPPKGTGSPPPP 140
Score = 29.5 bits (63), Expect = 5.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 944 PPPPXXGGGXPPPP 903
PPPP G G PPPP
Sbjct: 158 PPPPPKGTGSPPPP 171
Score = 29.5 bits (63), Expect = 5.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 944 PPPPXXGGGXPPPP 903
PPPP G G PPPP
Sbjct: 189 PPPPPKGTGTPPPP 202
Score = 29.5 bits (63), Expect = 5.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 944 PPPPXXGGGXPPPP 903
PPPP G G PPPP
Sbjct: 251 PPPPPKGTGSPPPP 264
Score = 29.5 bits (63), Expect = 5.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 944 PPPPXXGGGXPPPP 903
PPPP G G PPPP
Sbjct: 282 PPPPPKGTGTPPPP 295
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 29.5 bits (63), Expect = 5.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 944 PPPPXXGGGXPPPP 903
PP P GGG PPPP
Sbjct: 43 PPAPACGGGAPPPP 56
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 5.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 944 PPPPXXGGGXPPPPXXXXG 888
PPPP GG PPPP G
Sbjct: 580 PPPPPMLGGPPPPPPPPGG 598
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 29.1 bits (62), Expect = 6.7
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = -1
Query: 944 PPPPXXGG-GXPPPPXXXXGXFFXXXPPXXXG 852
PPPP G G PPP G + PP G
Sbjct: 40 PPPPVGAGVGYAPPPPRPYGATYAPPPPMGIG 71
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 29.1 bits (62), Expect = 6.7
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 472 GGGGGGXXXKKKXPPPXGGXXGXFFXHXGXXGXXKKGGGXGGKXK 606
G GGGG + GG G + G G GGG GG+ +
Sbjct: 232 GWGGGGGGRDRDRGGWGGGGGGRGYGGGGGGGGYGYGGGGGGRRR 276
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.308 0.148 0.467
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,316,301
Number of Sequences: 27780
Number of extensions: 347462
Number of successful extensions: 1023
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3359895476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
- SilkBase 1999-2023 -