Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_M13
         (1266 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457260-1|CAG33541.1|  247|Homo sapiens FLJ10525 protein.             56   4e-07
BC000948-1|AAH00948.2|  247|Homo sapiens transmembrane protein 3...    56   4e-07
AY659966-1|AAV70491.1|  247|Homo sapiens SHINC3 protein.               56   4e-07
AK023062-1|BAB14384.1|  247|Homo sapiens protein ( Homo sapiens ...    56   4e-07
AK001387-1|BAA91665.1|  247|Homo sapiens protein ( Homo sapiens ...    56   4e-07

>CR457260-1|CAG33541.1|  247|Homo sapiens FLJ10525 protein.
          Length = 247

 Score = 55.6 bits (128), Expect = 4e-07
 Identities = 32/73 (43%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
 Frame = +1

Query: 277 WGVRVITVXCTXGYVXPXL--NNPVSVFYXA*XANAXSXALRLHXRXPAREISLSREFMA 450
           W  R+ TV C+  +V P L  +   S +  A  ANA + ALRLH R P     LSR F+A
Sbjct: 28  WLSRLFTVYCSALFVLPLLGLHEAASFYQRALLANALTSALRLHQRLP--HFQLSRAFLA 85

Query: 451 RXFLKDSXHYLXY 489
           +  L+DS HYL Y
Sbjct: 86  QALLEDSCHYLLY 98


>BC000948-1|AAH00948.2|  247|Homo sapiens transmembrane protein 33
           protein.
          Length = 247

 Score = 55.6 bits (128), Expect = 4e-07
 Identities = 32/73 (43%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
 Frame = +1

Query: 277 WGVRVITVXCTXGYVXPXL--NNPVSVFYXA*XANAXSXALRLHXRXPAREISLSREFMA 450
           W  R+ TV C+  +V P L  +   S +  A  ANA + ALRLH R P     LSR F+A
Sbjct: 28  WLSRLFTVYCSALFVLPLLGLHEAASFYQRALLANALTSALRLHQRLP--HFQLSRAFLA 85

Query: 451 RXFLKDSXHYLXY 489
           +  L+DS HYL Y
Sbjct: 86  QALLEDSCHYLLY 98


>AY659966-1|AAV70491.1|  247|Homo sapiens SHINC3 protein.
          Length = 247

 Score = 55.6 bits (128), Expect = 4e-07
 Identities = 32/73 (43%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
 Frame = +1

Query: 277 WGVRVITVXCTXGYVXPXL--NNPVSVFYXA*XANAXSXALRLHXRXPAREISLSREFMA 450
           W  R+ TV C+  +V P L  +   S +  A  ANA + ALRLH R P     LSR F+A
Sbjct: 28  WLSRLFTVYCSALFVLPLLGLHEAASFYQRALLANALTSALRLHQRLP--HFQLSRAFLA 85

Query: 451 RXFLKDSXHYLXY 489
           +  L+DS HYL Y
Sbjct: 86  QALLEDSCHYLLY 98


>AK023062-1|BAB14384.1|  247|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13000 fis, clone NT2RP3000333, highly similar to
           Rattus norvegicus db83 mRNA. ).
          Length = 247

 Score = 55.6 bits (128), Expect = 4e-07
 Identities = 32/73 (43%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
 Frame = +1

Query: 277 WGVRVITVXCTXGYVXPXL--NNPVSVFYXA*XANAXSXALRLHXRXPAREISLSREFMA 450
           W  R+ TV C+  +V P L  +   S +  A  ANA + ALRLH R P     LSR F+A
Sbjct: 28  WLSRLFTVYCSALFVLPLLGLHEAASFYQRALLANALTSALRLHQRLP--HFQLSRAFLA 85

Query: 451 RXFLKDSXHYLXY 489
           +  L+DS HYL Y
Sbjct: 86  QALLEDSCHYLLY 98


>AK001387-1|BAA91665.1|  247|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10525 fis, clone NT2RP2000892. ).
          Length = 247

 Score = 55.6 bits (128), Expect = 4e-07
 Identities = 32/73 (43%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
 Frame = +1

Query: 277 WGVRVITVXCTXGYVXPXL--NNPVSVFYXA*XANAXSXALRLHXRXPAREISLSREFMA 450
           W  R+ TV C+  +V P L  +   S +  A  ANA + ALRLH R P     LSR F+A
Sbjct: 28  WLSRLFTVYCSALFVLPLLGLHEAASFYQRALLANALTSALRLHQRLP--HFQLSRAFLA 85

Query: 451 RXFLKDSXHYLXY 489
           +  L+DS HYL Y
Sbjct: 86  QALLEDSCHYLLY 98


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,793,232
Number of Sequences: 237096
Number of extensions: 991052
Number of successful extensions: 1713
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1708
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18110209670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)