Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_M13
         (1266 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    23   4.3  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    23   4.3  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   9.9  

>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 480 IVXTVLQEXPRHELPREGD 424
           +V TVLQ  P  EL + GD
Sbjct: 26  LVNTVLQPRPSFELSKNGD 44


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 480 IVXTVLQEXPRHELPREGD 424
           +V TVLQ  P  EL + GD
Sbjct: 28  LVNTVLQPRPSFELSKNGD 46


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 10/44 (22%), Positives = 20/44 (45%)
 Frame = +2

Query: 170 NQHGRSKSASRRHWSSQRHPSLESSHHCQ*NXRXSGGGSA*SPC 301
           + H   ++ S +H   ++ P+L  S+    N   + G    +PC
Sbjct: 351 HHHHHHQTQSLQHLHYRQPPTLSESYSSYVNSMYASGAQFATPC 394


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,015
Number of Sequences: 438
Number of extensions: 1711
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 43342743
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)