Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_M11
(1210 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.13
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.13
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.13
AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical ... 33 0.40
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.2
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 3.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 3.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 3.8
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 5.0
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 5.0
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 5.0
U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical pr... 29 6.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 6.6
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 6.6
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 29 8.7
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 8.7
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.7 bits (76), Expect = 0.13
Identities = 15/27 (55%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = -1
Query: 646 GXPPFXGXPPXPPX--GGXXPXPPPFP 572
G PP G PP PP GG P PPP P
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/53 (35%), Positives = 19/53 (35%), Gaps = 4/53 (7%)
Frame = -1
Query: 646 GXPPFXGXPPXPPXGGXXP----XPPPFPXXXXXXXXXXXXGPXXXXPXPXGG 500
G PP G PP PP G P PPP P P P P GG
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP---PPPPPGG 767
Score = 29.9 bits (64), Expect = 3.8
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = -3
Query: 326 GGPPPXXFFFFXXG--XPPPPXGGXXPXXXXPP 234
GGPPP G PPPP GG P PP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP 743
Score = 29.1 bits (62), Expect = 6.6
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 5/26 (19%)
Frame = -1
Query: 640 PPFXGXPPXPP-----XGGXXPXPPP 578
PP G PP PP GG P PPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPP 732
Score = 29.1 bits (62), Expect = 6.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 647 GXPPLXXGXPXPPPXGG 597
G PP+ G P PPP GG
Sbjct: 718 GLPPITGGPPPPPPPGG 734
Score = 29.1 bits (62), Expect = 6.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 647 GXPPLXXGXPXPPPXGG 597
G PP+ G P PPP GG
Sbjct: 734 GLPPITGGPPPPPPPGG 750
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.7 bits (76), Expect = 0.13
Identities = 15/27 (55%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = -1
Query: 646 GXPPFXGXPPXPPX--GGXXPXPPPFP 572
G PP G PP PP GG P PPP P
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/53 (35%), Positives = 19/53 (35%), Gaps = 4/53 (7%)
Frame = -1
Query: 646 GXPPFXGXPPXPPXGGXXP----XPPPFPXXXXXXXXXXXXGPXXXXPXPXGG 500
G PP G PP PP G P PPP P P P P GG
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP---PPPPPGG 767
Score = 29.9 bits (64), Expect = 3.8
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = -3
Query: 326 GGPPPXXFFFFXXG--XPPPPXGGXXPXXXXPP 234
GGPPP G PPPP GG P PP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP 743
Score = 29.1 bits (62), Expect = 6.6
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 5/26 (19%)
Frame = -1
Query: 640 PPFXGXPPXPP-----XGGXXPXPPP 578
PP G PP PP GG P PPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPP 732
Score = 29.1 bits (62), Expect = 6.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 647 GXPPLXXGXPXPPPXGG 597
G PP+ G P PPP GG
Sbjct: 718 GLPPITGGPPPPPPPGG 734
Score = 29.1 bits (62), Expect = 6.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 647 GXPPLXXGXPXPPPXGG 597
G PP+ G P PPP GG
Sbjct: 734 GLPPITGGPPPPPPPGG 750
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.7 bits (76), Expect = 0.13
Identities = 15/27 (55%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = -1
Query: 646 GXPPFXGXPPXPPX--GGXXPXPPPFP 572
G PP G PP PP GG P PPP P
Sbjct: 333 GLPPISGGPPPPPPPPGGCPPPPPPPP 359
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/53 (35%), Positives = 19/53 (35%), Gaps = 4/53 (7%)
Frame = -1
Query: 646 GXPPFXGXPPXPPXGGXXP----XPPPFPXXXXXXXXXXXXGPXXXXPXPXGG 500
G PP G PP PP G P PPP P P P P GG
Sbjct: 301 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP---PPPPPGG 350
Score = 29.9 bits (64), Expect = 3.8
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Frame = -3
Query: 326 GGPPPXXFFFFXXG--XPPPPXGGXXPXXXXPP 234
GGPPP G PPPP GG P PP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP 326
Score = 29.1 bits (62), Expect = 6.6
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 5/26 (19%)
Frame = -1
Query: 640 PPFXGXPPXPP-----XGGXXPXPPP 578
PP G PP PP GG P PPP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPP 315
Score = 29.1 bits (62), Expect = 6.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 647 GXPPLXXGXPXPPPXGG 597
G PP+ G P PPP GG
Sbjct: 301 GLPPITGGPPPPPPPGG 317
Score = 29.1 bits (62), Expect = 6.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 647 GXPPLXXGXPXPPPXGG 597
G PP+ G P PPP GG
Sbjct: 317 GLPPITGGPPPPPPPGG 333
>AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical
protein F13C5.2 protein.
Length = 374
Score = 33.1 bits (72), Expect = 0.40
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +1
Query: 235 GGXKXXGXXPPXGGGGXPXXKKKKXXG-GGPPXKKXXKKK 351
GG G GG G P K G GGPP K+ KKK
Sbjct: 62 GGESTRGGGTGRGGRGRPRGSKNSDGGAGGPPAKRGRKKK 101
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 1.2
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -1
Query: 640 PPFXGXPPXPPXGGXXPXPPPFPXXXXXXXXXXXXGPXXXXPXPXGGG 497
PP G PP PP GG PPP P P P GG
Sbjct: 274 PPPTGSPPPPPAGG--SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 319
Score = 28.7 bits (61), Expect = 8.7
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 640 PPFXGXPPXPPXGGXXPXPPP 578
PP G PP PP G P PPP
Sbjct: 266 PPRTGSPPPPPTGS--PPPPP 284
Score = 28.7 bits (61), Expect = 8.7
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = -2
Query: 642 PPPFXGXPLXPPXGGXXPXPPXSPXXXXXXXXXXXGAPXXXPPXPXGG 499
PPP G P PP GG P PP + PP GG
Sbjct: 273 PPPPTGSPPPPPAGG-SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 319
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 1.2
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -1
Query: 640 PPFXGXPPXPPXGGXXPXPPPFPXXXXXXXXXXXXGPXXXXPXPXGGG 497
PP G PP PP GG PPP P P P GG
Sbjct: 295 PPPTGSPPPPPAGG--SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 340
Score = 28.7 bits (61), Expect = 8.7
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 640 PPFXGXPPXPPXGGXXPXPPP 578
PP G PP PP G P PPP
Sbjct: 287 PPRTGSPPPPPTGS--PPPPP 305
Score = 28.7 bits (61), Expect = 8.7
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = -2
Query: 642 PPPFXGXPLXPPXGGXXPXPPXSPXXXXXXXXXXXGAPXXXPPXPXGG 499
PPP G P PP GG P PP + PP GG
Sbjct: 294 PPPPTGSPPPPPAGG-SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 340
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 1.2
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -1
Query: 640 PPFXGXPPXPPXGGXXPXPPPFPXXXXXXXXXXXXGPXXXXPXPXGGG 497
PP G PP PP GG PPP P P P GG
Sbjct: 280 PPPTGSPPPPPAGG--SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 325
Score = 28.7 bits (61), Expect = 8.7
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 640 PPFXGXPPXPPXGGXXPXPPP 578
PP G PP PP G P PPP
Sbjct: 272 PPRTGSPPPPPTGS--PPPPP 290
Score = 28.7 bits (61), Expect = 8.7
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = -2
Query: 642 PPPFXGXPLXPPXGGXXPXPPXSPXXXXXXXXXXXGAPXXXPPXPXGG 499
PPP G P PP GG P PP + PP GG
Sbjct: 279 PPPPTGSPPPPPAGG-SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 325
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 3.8
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 4/30 (13%)
Frame = -1
Query: 655 FXXGXPP----FXGXPPXPPXGGXXPXPPP 578
F G PP G PP PP G P PPP
Sbjct: 90 FAGGIPPPPPMMGGIPPPPPMFGAPPPPPP 119
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 3/52 (5%)
Frame = -1
Query: 646 GXPPFXGXPPXPPXGGXXP---XPPPFPXXXXXXXXXXXXGPXXXXPXPXGG 500
G P G PP PP G P PPP P P P P G
Sbjct: 326 GPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSG 377
Score = 28.7 bits (61), Expect = 8.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 640 PPFXGXPPXPPXGGXXPXPPPFP 572
P PP PP G P PPP P
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPPPP 303
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 3.8
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 3/52 (5%)
Frame = -1
Query: 646 GXPPFXGXPPXPPXGGXXP---XPPPFPXXXXXXXXXXXXGPXXXXPXPXGG 500
G P G PP PP G P PPP P P P P G
Sbjct: 336 GPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSG 387
Score = 28.7 bits (61), Expect = 8.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 640 PPFXGXPPXPPXGGXXPXPPPFP 572
P PP PP G P PPP P
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPPPP 313
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.5 bits (63), Expect = 5.0
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 646 GXPPFXGXPPXPPXGGXXPXPPPFP 572
G PP PP PP G P PPP P
Sbjct: 232 GAPP---PPPLPPVGAGAPPPPPPP 253
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.5 bits (63), Expect = 5.0
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 646 GXPPFXGXPPXPPXGGXXPXPPPFP 572
G PP PP PP G P PPP P
Sbjct: 218 GAPP---PPPLPPVGAGAPPPPPPP 239
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.5 bits (63), Expect = 5.0
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 646 GXPPFXGXPPXPPXGGXXPXPPPFP 572
G PP PP PP G P PPP P
Sbjct: 218 GAPP---PPPLPPVGAGAPPPPPPP 239
>U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical
protein K09H11.4 protein.
Length = 630
Score = 29.1 bits (62), Expect = 6.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 640 PPFXGXPPXPPXGGXXPXPPPFP 572
PPF P P GG P P FP
Sbjct: 395 PPFPAFPKFPSFGGFQPFQPDFP 417
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 6.6
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 326 GGPPPXXFFFFXXGXPPPPXGGXXPXXXXPP 234
G PPP G PPP GG P PP
Sbjct: 1467 GPPPPRGMNSPMRGMPPPMRGGGPPMRGGPP 1497
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 6.6
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = -3
Query: 320 PPPXXFFFFXXGXPPPPXG-GXXPXXXXPP 234
PPP F G PPPP G G P PP
Sbjct: 743 PPPMFQQGFNAGAPPPPFGRGAGPMSSFPP 772
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 28.7 bits (61), Expect = 8.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 640 PPFXGXPPXPPXGGXXPXPPPF 575
PPF P PP P PPPF
Sbjct: 778 PPFFALPVPPPPPVPPPPPPPF 799
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.7 bits (61), Expect = 8.7
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = -2
Query: 642 PPPFXGXPLXP-PXGGXXPXPPXSPXXXXXXXXXXXGAPXXXPPXPXGGGXF 490
PP G P P GG P PP P G PP P G G +
Sbjct: 393 PPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAY 444
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.304 0.141 0.455
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,221,160
Number of Sequences: 27780
Number of extensions: 357704
Number of successful extensions: 974
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3328592102
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.7 bits)
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