Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_M08
         (1199 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6CQQ5 Cluster: Similar to sgd|S0006321 Saccharomyces c...    34   6.4  
UniRef50_Q7P568 Cluster: Putative uncharacterized protein FNV083...    34   8.4  
UniRef50_A3S1P0 Cluster: Glycosyltransferase, group 2 family pro...    34   8.4  

>UniRef50_Q6CQQ5 Cluster: Similar to sgd|S0006321 Saccharomyces
           cerevisiae YPR117w; n=1; Kluyveromyces lactis|Rep:
           Similar to sgd|S0006321 Saccharomyces cerevisiae YPR117w
           - Kluyveromyces lactis (Yeast) (Candida sphaerica)
          Length = 2379

 Score = 34.3 bits (75), Expect = 6.4
 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = +2

Query: 692 SQEVLPPVITQIIILRISFLLHDVIPSPWKSIVNIC*VRISLQKLVPA*YSNTGASL-NT 868
           +Q  LPP+I +III   + LL +   + +  I +     ++LQ LVP+ Y N    L NT
Sbjct: 373 NQLELPPIILKIIISNSNLLLKEDTKNYYHLISDSISSELNLQSLVPSAYKNDTTDLYNT 432

Query: 869 IAPDVR 886
           ++  V+
Sbjct: 433 LSSTVK 438


>UniRef50_Q7P568 Cluster: Putative uncharacterized protein FNV0838;
           n=1; Fusobacterium nucleatum subsp. vincentii ATCC
           49256|Rep: Putative uncharacterized protein FNV0838 -
           Fusobacterium nucleatum subsp. vincentii ATCC 49256
          Length = 272

 Score = 33.9 bits (74), Expect = 8.4
 Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
 Frame = -3

Query: 522 STILKFTFGNYVPYLIKKYI-LQLTNN*LLVHLKVCSTVLLLIECNLL---ITSQKHSLR 355
           S IL F   NY  YL +KYI + L  + LL  + V S +L LIE +L     T    S  
Sbjct: 70  SLILNFFLINYFYYLGEKYIEILLFLSLLLFFILVYSFLLFLIEEDLFYFKYTLISFSYL 129

Query: 354 SYFIYFKSVLVP-----ICNVNYIFFTVKYPLTLFI-REID 250
            + IY    ++P     IC +  IF+ V Y L +F+ +E++
Sbjct: 130 LFLIYLTVPIIPPKKEGICYIIGIFYIV-YVLMIFLFKEVE 169


>UniRef50_A3S1P0 Cluster: Glycosyltransferase, group 2 family
           protein; n=1; Prochlorococcus marinus str. MIT 9211|Rep:
           Glycosyltransferase, group 2 family protein -
           Prochlorococcus marinus str. MIT 9211
          Length = 306

 Score = 33.9 bits (74), Expect = 8.4
 Identities = 22/70 (31%), Positives = 34/70 (48%)
 Frame = -3

Query: 438 LVHLKVCSTVLLLIECNLLITSQKHSLRSYFIYFKSVLVPICNVNYIFFTVKYPLTLFIR 259
           L + K+   +L +++C+ +    K  L     YFK   V IC  N IFF+ K  + L+  
Sbjct: 77  LAYNKITGEMLTILDCDDIWMQNK--LSEQVKYFKQEEVGICYSNTIFFSHKNQMKLYTD 134

Query: 258 EIDPNGSVRS 229
           +I  N S  S
Sbjct: 135 DIRINDSTDS 144


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 997,639,905
Number of Sequences: 1657284
Number of extensions: 19920172
Number of successful extensions: 41055
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 39452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41048
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 120758430771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)