Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_M05
(1372 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor, argini... 33 3.2
BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor, argini... 33 3.2
BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor, argini... 33 3.2
BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor, argini... 33 3.2
AL117417-1|CAB55911.1| 667|Homo sapiens hypothetical protein pr... 33 3.2
AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR pr... 33 3.2
AB032998-1|BAA86486.1| 929|Homo sapiens KIAA1172 protein protein. 33 3.2
>BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 32.7 bits (71), Expect = 3.2
Identities = 22/88 (25%), Positives = 23/88 (26%)
Frame = +2
Query: 1109 PXXXXXPHXPPXPXXXXXXXPXXXXXXXXXPPXAXSGPPXXPXXXPXXXXXXXXPRXXPL 1288
P PH P P P PP G P P P P P
Sbjct: 678 PPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFN-PMHLPP 736
Query: 1289 GLXPXGPXPXFXXTVXXXSAXSRPXXXP 1372
G P GP P V + P P
Sbjct: 737 GFLPPGPPPPITPPVSIPPPHTPPISIP 764
>BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 32.7 bits (71), Expect = 3.2
Identities = 22/88 (25%), Positives = 23/88 (26%)
Frame = +2
Query: 1109 PXXXXXPHXPPXPXXXXXXXPXXXXXXXXXPPXAXSGPPXXPXXXPXXXXXXXXPRXXPL 1288
P PH P P P PP G P P P P P
Sbjct: 678 PPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFN-PMHLPP 736
Query: 1289 GLXPXGPXPXFXXTVXXXSAXSRPXXXP 1372
G P GP P V + P P
Sbjct: 737 GFLPPGPPPPITPPVSIPPPHTPPISIP 764
>BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1146
Score = 32.7 bits (71), Expect = 3.2
Identities = 22/88 (25%), Positives = 23/88 (26%)
Frame = +2
Query: 1109 PXXXXXPHXPPXPXXXXXXXPXXXXXXXXXPPXAXSGPPXXPXXXPXXXXXXXXPRXXPL 1288
P PH P P P PP G P P P P P
Sbjct: 678 PPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFN-PMHLPP 736
Query: 1289 GLXPXGPXPXFXXTVXXXSAXSRPXXXP 1372
G P GP P V + P P
Sbjct: 737 GFLPPGPPPPITPPVSIPPPHTPPISIP 764
>BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 32.7 bits (71), Expect = 3.2
Identities = 22/88 (25%), Positives = 23/88 (26%)
Frame = +2
Query: 1109 PXXXXXPHXPPXPXXXXXXXPXXXXXXXXXPPXAXSGPPXXPXXXPXXXXXXXXPRXXPL 1288
P PH P P P PP G P P P P P
Sbjct: 678 PPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFN-PMHLPP 736
Query: 1289 GLXPXGPXPXFXXTVXXXSAXSRPXXXP 1372
G P GP P V + P P
Sbjct: 737 GFLPPGPPPPITPPVSIPPPHTPPISIP 764
>AL117417-1|CAB55911.1| 667|Homo sapiens hypothetical protein
protein.
Length = 667
Score = 32.7 bits (71), Expect = 3.2
Identities = 22/88 (25%), Positives = 23/88 (26%)
Frame = +2
Query: 1109 PXXXXXPHXPPXPXXXXXXXPXXXXXXXXXPPXAXSGPPXXPXXXPXXXXXXXXPRXXPL 1288
P PH P P P PP G P P P P P
Sbjct: 489 PPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFN-PMHLPP 547
Query: 1289 GLXPXGPXPXFXXTVXXXSAXSRPXXXP 1372
G P GP P V + P P
Sbjct: 548 GFLPPGPPPPITPPVSIPPPHTPPISIP 575
>AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR protein
rA4 protein.
Length = 1157
Score = 32.7 bits (71), Expect = 3.2
Identities = 22/88 (25%), Positives = 23/88 (26%)
Frame = +2
Query: 1109 PXXXXXPHXPPXPXXXXXXXPXXXXXXXXXPPXAXSGPPXXPXXXPXXXXXXXXPRXXPL 1288
P PH P P P PP G P P P P P
Sbjct: 688 PPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFN-PMHLPP 746
Query: 1289 GLXPXGPXPXFXXTVXXXSAXSRPXXXP 1372
G P GP P V + P P
Sbjct: 747 GFLPPGPPPPITPPVSIPPPHTPPISIP 774
>AB032998-1|BAA86486.1| 929|Homo sapiens KIAA1172 protein protein.
Length = 929
Score = 32.7 bits (71), Expect = 3.2
Identities = 22/88 (25%), Positives = 23/88 (26%)
Frame = +2
Query: 1109 PXXXXXPHXPPXPXXXXXXXPXXXXXXXXXPPXAXSGPPXXPXXXPXXXXXXXXPRXXPL 1288
P PH P P P PP G P P P P P
Sbjct: 482 PPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFN-PMHLPP 540
Query: 1289 GLXPXGPXPXFXXTVXXXSAXSRPXXXP 1372
G P GP P V + P P
Sbjct: 541 GFLPPGPPPPITPPVSIPPPHTPPISIP 568
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,268,519
Number of Sequences: 237096
Number of extensions: 643943
Number of successful extensions: 1749
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1471
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 19895715642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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