Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_M05
         (1372 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119485-1|AAM50139.1|  846|Drosophila melanogaster GH07623p pro...    31   2.8  
AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA...    31   2.8  
AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB...    31   2.8  

>AY119485-1|AAM50139.1|  846|Drosophila melanogaster GH07623p protein.
          Length = 846

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 23/81 (28%), Positives = 25/81 (30%), Gaps = 3/81 (3%)
 Frame = +3

Query: 1008 PPXXNPXXXPRPXA-XXXPXPPXVXXXXPXXGPXXPXXPXRXTXXXRXXXVXXXXRXXPX 1184
            PP  NP   PRP +    P PP         GP  P  P R                 P 
Sbjct: 89   PPKVNPPPPPRPASPKVEPPPPAPPGVESPPGPQPPASP-RFDPPPPHTIEPPPPPAPPT 147

Query: 1185 XXXXAPPXPXXV--PPXAXPP 1241
                 PP P  +  PP   PP
Sbjct: 148  LVPPPPPAPPTIKPPPPPAPP 168



 Score = 30.7 bits (66), Expect = 4.9
 Identities = 18/78 (23%), Positives = 19/78 (24%)
 Frame = +3

Query: 1008 PPXXNPXXXPRPXAXXXPXPPXVXXXXPXXGPXXPXXPXRXTXXXRXXXVXXXXRXXPXX 1187
            PP   P   P P     P PP          P  P  P +                 P  
Sbjct: 156  PPTIKPPPPPAPPTVEPPPPPPPAPPTVEPPPPPPPAPTKVEPPPPPAPAEVEPPPPPAP 215

Query: 1188 XXXAPPXPXXVPPXAXPP 1241
                PP P   P    PP
Sbjct: 216  TELEPPPPPAPPKVELPP 233


>AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA,
            isoform A protein.
          Length = 1109

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 23/81 (28%), Positives = 25/81 (30%), Gaps = 3/81 (3%)
 Frame = +3

Query: 1008 PPXXNPXXXPRPXA-XXXPXPPXVXXXXPXXGPXXPXXPXRXTXXXRXXXVXXXXRXXPX 1184
            PP  NP   PRP +    P PP         GP  P  P R                 P 
Sbjct: 352  PPKVNPPPPPRPASPKVEPPPPAPPGVESPPGPQPPASP-RFDPPPPHTIEPPPPPAPPT 410

Query: 1185 XXXXAPPXPXXV--PPXAXPP 1241
                 PP P  +  PP   PP
Sbjct: 411  LVPPPPPAPPTIKPPPPPAPP 431



 Score = 30.7 bits (66), Expect = 4.9
 Identities = 18/78 (23%), Positives = 19/78 (24%)
 Frame = +3

Query: 1008 PPXXNPXXXPRPXAXXXPXPPXVXXXXPXXGPXXPXXPXRXTXXXRXXXVXXXXRXXPXX 1187
            PP   P   P P     P PP          P  P  P +                 P  
Sbjct: 419  PPTIKPPPPPAPPTVEPPPPPPPAPPTVEPPPPPPPAPTKVEPPPPPAPAEVEPPPPPAP 478

Query: 1188 XXXAPPXPXXVPPXAXPP 1241
                PP P   P    PP
Sbjct: 479  TELEPPPPPAPPKVELPP 496


>AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB,
            isoform B protein.
          Length = 1150

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 23/81 (28%), Positives = 25/81 (30%), Gaps = 3/81 (3%)
 Frame = +3

Query: 1008 PPXXNPXXXPRPXA-XXXPXPPXVXXXXPXXGPXXPXXPXRXTXXXRXXXVXXXXRXXPX 1184
            PP  NP   PRP +    P PP         GP  P  P R                 P 
Sbjct: 352  PPKVNPPPPPRPASPKVEPPPPAPPGVESPPGPQPPASP-RFDPPPPHTIEPPPPPAPPT 410

Query: 1185 XXXXAPPXPXXV--PPXAXPP 1241
                 PP P  +  PP   PP
Sbjct: 411  LVPPPPPAPPTIKPPPPPAPP 431



 Score = 30.7 bits (66), Expect = 4.9
 Identities = 18/78 (23%), Positives = 19/78 (24%)
 Frame = +3

Query: 1008 PPXXNPXXXPRPXAXXXPXPPXVXXXXPXXGPXXPXXPXRXTXXXRXXXVXXXXRXXPXX 1187
            PP   P   P P     P PP          P  P  P +                 P  
Sbjct: 419  PPTIKPPPPPAPPTVEPPPPPPPAPPTVEPPPPPPPAPTKVEPPPPPAPAEVEPPPPPAP 478

Query: 1188 XXXAPPXPXXVPPXAXPP 1241
                PP P   P    PP
Sbjct: 479  TELEPPPPPAPPKVELPP 496


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,465,513
Number of Sequences: 53049
Number of extensions: 170954
Number of successful extensions: 527
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 7517675745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)