Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_M04
         (1226 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8ESZ4 Cluster: Hypothetical conserved protein; n=2; Ba...    34   8.6  
UniRef50_Q0V4D7 Cluster: Putative uncharacterized protein; n=1; ...    34   8.6  

>UniRef50_Q8ESZ4 Cluster: Hypothetical conserved protein; n=2;
           Bacillaceae|Rep: Hypothetical conserved protein -
           Oceanobacillus iheyensis
          Length = 246

 Score = 33.9 bits (74), Expect = 8.6
 Identities = 28/86 (32%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
 Frame = -3

Query: 825 GGXXGPKPQXGGGXXFXGXFXXXALPPXFFXXGXPXX--PEGXPXGXF*GGPXTGXPXXK 652
           GG  G  P  G G  F G F      P     G P    P G P G   GGP  G P   
Sbjct: 87  GGFPGGGPDGGPGGGFPGGF------PGGGPGGGPGGGFPGGFPGGGPDGGPGGGFPGGI 140

Query: 651 RXXXXGGXXKLGXXPGXXFKGTRXVP 574
                GG    G  PG   +G +  P
Sbjct: 141 FDGFPGGGFPGGGFPGGGGQGGQQAP 166


>UniRef50_Q0V4D7 Cluster: Putative uncharacterized protein; n=1;
            Phaeosphaeria nodorum|Rep: Putative uncharacterized
            protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 565

 Score = 33.9 bits (74), Expect = 8.6
 Identities = 23/69 (33%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
 Frame = -1

Query: 1076 PGGXPPXXFXXGXGGXXXXXPXXXGGNFQXGXSVFKKXXPXXF-LXPPGFXXXLNWPXPF 900
            PGG PP     G GG         GG F  G   F    P  F + PP F     W  P 
Sbjct: 118  PGGYPPFGGPGGPGGPYPNRFGPQGG-FPGGPGPFPGGPPGAFGMPPPPFGAPPGWFPPG 176

Query: 899  XGXPPPXXP 873
             G   P  P
Sbjct: 177  QGFNHPPGP 185


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 709,052,750
Number of Sequences: 1657284
Number of extensions: 10955114
Number of successful extensions: 6994
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6802
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 123505711495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)