Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_M04
         (1226 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058563-1|AAL13792.1|  652|Drosophila melanogaster LD25239p pro...    31   4.2  
AE014296-1420|AAF50445.2|  652|Drosophila melanogaster CG7185-PA...    31   4.2  

>AY058563-1|AAL13792.1|  652|Drosophila melanogaster LD25239p protein.
          Length = 652

 Score = 30.7 bits (66), Expect = 4.2
 Identities = 26/95 (27%), Positives = 31/95 (32%), Gaps = 1/95 (1%)
 Frame = +1

Query: 883  GGGXPXKGXGQFKXXLNPGGXKKXXGLXFLKTXFPXWKXPPXXXGKXXXXPPXPXXKXXG 1062
            GG  P    G  +  +  GG     G+       P W+ PP   G     PP       G
Sbjct: 294  GGPRPGPPNGPPQRPMFQGGPM---GMPVRGPAGPDWRRPPMHGGFPPQGPPRGLPPAPG 350

Query: 1063 GXPPGXXKXXXSXXXXKXFFXXXGG-XXXPGXGGP 1164
               PG      +      FF   GG    PG GGP
Sbjct: 351  ---PGGPHGAPAPHVNPAFFNQPGGPAQHPGMGGP 382


>AE014296-1420|AAF50445.2|  652|Drosophila melanogaster CG7185-PA
            protein.
          Length = 652

 Score = 30.7 bits (66), Expect = 4.2
 Identities = 26/95 (27%), Positives = 31/95 (32%), Gaps = 1/95 (1%)
 Frame = +1

Query: 883  GGGXPXKGXGQFKXXLNPGGXKKXXGLXFLKTXFPXWKXPPXXXGKXXXXPPXPXXKXXG 1062
            GG  P    G  +  +  GG     G+       P W+ PP   G     PP       G
Sbjct: 294  GGPRPGPPNGPPQRPMFQGGPM---GMPVRGPAGPDWRRPPMHGGFPPQGPPRGLPPAPG 350

Query: 1063 GXPPGXXKXXXSXXXXKXFFXXXGG-XXXPGXGGP 1164
               PG      +      FF   GG    PG GGP
Sbjct: 351  ---PGGPHGAPAPHVNPAFFNQPGGPAQHPGMGGP 382


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,197,408
Number of Sequences: 53049
Number of extensions: 635516
Number of successful extensions: 911
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6539766705
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)