Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_M02
(1167 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D56B30 Cluster: PREDICTED: similar to CG10670-PA... 154 5e-36
UniRef50_Q9U9Q6 Cluster: GM10765p; n=3; Sophophora|Rep: GM10765p... 153 6e-36
UniRef50_Q7QCK4 Cluster: ENSANGP00000021102; n=2; Culicidae|Rep:... 149 2e-34
UniRef50_UPI00015B61EE Cluster: PREDICTED: similar to CG10670-PA... 135 2e-30
UniRef50_UPI0000DB6CF0 Cluster: PREDICTED: similar to XPG-like e... 135 2e-30
UniRef50_Q6ZN37 Cluster: CDNA FLJ16464 fis, clone BRHIP2012360; ... 100 6e-20
UniRef50_UPI0000F1DE87 Cluster: PREDICTED: hypothetical protein;... 77 9e-13
UniRef50_UPI0000ECCA49 Cluster: CDNA FLJ16464 fis, clone BRHIP20... 71 8e-11
UniRef50_Q2VQ32 Cluster: Single strand DNA repair-like protein; ... 69 2e-10
UniRef50_Q9M2Z3 Cluster: Putative uncharacterized protein T21J18... 68 4e-10
UniRef50_UPI0000162BF3 Cluster: DNA repair protein, putative; n=... 67 9e-10
UniRef50_Q9LPD2 Cluster: F22M8.2 protein; n=4; core eudicotyledo... 67 9e-10
UniRef50_Q8W5R1 Cluster: Single-strand DNA endonuclease-1; n=5; ... 65 4e-09
UniRef50_Q76F73 Cluster: Flap endonuclease-1; n=2; Agaricomycoti... 58 4e-07
UniRef50_Q568J1 Cluster: Zgc:110269; n=4; Danio rerio|Rep: Zgc:1... 56 1e-06
UniRef50_UPI0000E4749C Cluster: PREDICTED: hypothetical protein;... 56 2e-06
UniRef50_Q4FYU7 Cluster: Flap endonuclease-1 (FEN-1), putative; ... 56 2e-06
UniRef50_Q75LI2 Cluster: Flap endonuclease 1b; n=8; Magnoliophyt... 56 2e-06
UniRef50_A3FPN7 Cluster: Flap endonuclease 1; n=2; Cryptosporidi... 55 3e-06
UniRef50_UPI000049A186 Cluster: FEN-1 nuclease; n=1; Entamoeba h... 55 4e-06
UniRef50_A2GNP0 Cluster: XPG I-region family protein; n=1; Trich... 55 4e-06
UniRef50_Q9SXQ6 Cluster: Flap endonuclease 1a; n=14; Eukaryota|R... 55 4e-06
UniRef50_P39748 Cluster: Flap endonuclease 1; n=22; Eumetazoa|Re... 54 7e-06
UniRef50_Q4A3A7 Cluster: Putative endonuclease; n=1; Emiliania h... 53 1e-05
UniRef50_Q54NU0 Cluster: XPG; n=1; Dictyostelium discoideum AX4|... 53 1e-05
UniRef50_A7RUB0 Cluster: Predicted protein; n=1; Nematostella ve... 53 2e-05
UniRef50_Q7R289 Cluster: GLP_422_59630_60715; n=1; Giardia lambl... 52 4e-05
UniRef50_A7RTI4 Cluster: Predicted protein; n=1; Nematostella ve... 51 5e-05
UniRef50_P26793 Cluster: Structure-specific endonuclease RAD27; ... 51 7e-05
UniRef50_A7F0Q6 Cluster: Putative uncharacterized protein; n=1; ... 50 1e-04
UniRef50_Q976H6 Cluster: Flap structure-specific endonuclease; n... 49 3e-04
UniRef50_Q8SS91 Cluster: STRUCTURE-SPECIFIC ENDONUCLEASE OF THE ... 47 8e-04
UniRef50_UPI0000DA3193 Cluster: PREDICTED: similar to excision r... 46 0.001
UniRef50_Q013G9 Cluster: FEN-1; n=1; Ostreococcus tauri|Rep: FEN... 45 0.003
UniRef50_Q4UFP0 Cluster: 5'-3' exonuclease, putative; n=2; Theil... 45 0.004
UniRef50_Q6C8E7 Cluster: Similar to sp|P28706 Schizosaccharomyce... 45 0.004
UniRef50_Q58839 Cluster: Flap structure-specific endonuclease; n... 45 0.004
UniRef50_P28715 Cluster: DNA-repair protein complementing XP-G c... 45 0.004
UniRef50_UPI0000DB70EE Cluster: PREDICTED: similar to CG10890-PC... 44 0.006
UniRef50_UPI000058838C Cluster: PREDICTED: similar to XPGC prote... 44 0.006
UniRef50_Q4AEJ2 Cluster: XPG; n=2; Gallus gallus|Rep: XPG - Gall... 44 0.006
UniRef50_Q6L2I9 Cluster: Flap structure-specific endonuclease; n... 44 0.008
UniRef50_Q4SHZ0 Cluster: Chromosome 5 SCAF14581, whole genome sh... 42 0.023
UniRef50_Q8PYF6 Cluster: Flap structure-specific endonuclease; n... 42 0.023
UniRef50_P14629 Cluster: DNA-repair protein complementing XP-G c... 42 0.031
UniRef50_P61942 Cluster: Flap structure-specific endonuclease; n... 42 0.040
UniRef50_A7AX58 Cluster: XPG N-terminal domain and XPG I-region ... 41 0.053
UniRef50_Q9U0K1 Cluster: Flap endonuclease 1; n=10; Eukaryota|Re... 40 0.12
UniRef50_A0E7S1 Cluster: Chromosome undetermined scaffold_81, wh... 39 0.22
UniRef50_Q4U2Q2 Cluster: XPG variant; n=7; Drosophila melanogast... 39 0.28
UniRef50_O96154 Cluster: DNA repair endonuclease, putative; n=1;... 39 0.28
UniRef50_Q1E1S0 Cluster: Putative uncharacterized protein; n=1; ... 39 0.28
UniRef50_Q2NFD4 Cluster: Flap structure-specific endonuclease; n... 39 0.28
UniRef50_A7ASU9 Cluster: Rad2 endonuclease, putative; n=1; Babes... 38 0.38
UniRef50_A2DH64 Cluster: Putative uncharacterized protein; n=1; ... 38 0.38
UniRef50_A0CXT3 Cluster: Chromosome undetermined scaffold_30, wh... 38 0.38
UniRef50_Q4JR61 Cluster: Putative uncharacterized protein; n=1; ... 38 0.50
UniRef50_A5KBK9 Cluster: DNA repair endonuclease, putative; n=1;... 38 0.50
UniRef50_A7PMD6 Cluster: Chromosome chr14 scaffold_21, whole gen... 38 0.66
UniRef50_Q8STM5 Cluster: Similarity to DNA repair protein RAD2; ... 38 0.66
UniRef50_UPI00006CAA8D Cluster: XPG N-terminal domain containing... 37 0.87
UniRef50_Q55XC5 Cluster: Putative uncharacterized protein; n=2; ... 37 0.87
UniRef50_UPI000023CEE4 Cluster: hypothetical protein FG04386.1; ... 37 1.1
UniRef50_Q00XT2 Cluster: 5'-3' exonuclease; n=2; Ostreococcus|Re... 37 1.1
UniRef50_Q4P7L5 Cluster: Putative uncharacterized protein; n=1; ... 37 1.1
UniRef50_Q54AQ1 Cluster: Xeroderma pigmentosum group G (XPG) fam... 35 3.5
UniRef50_Q5KPE3 Cluster: Single-stranded DNA specific endodeoxyr... 35 3.5
UniRef50_Q6ANA1 Cluster: Putative uncharacterized protein; n=1; ... 35 4.6
UniRef50_Q6BH44 Cluster: Similar to CA2827|CaRAD2 Candida albica... 35 4.6
UniRef50_Q754D7 Cluster: AFR133Cp; n=1; Eremothecium gossypii|Re... 34 6.1
UniRef50_A3LTL9 Cluster: Predicted protein; n=2; Saccharomycetal... 34 6.1
UniRef50_Q4Y208 Cluster: DNA repair endonuclease, putative; n=3;... 34 8.1
UniRef50_P28706 Cluster: DNA-repair protein rad13; n=1; Schizosa... 34 8.1
>UniRef50_UPI0000D56B30 Cluster: PREDICTED: similar to CG10670-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG10670-PA - Tribolium castaneum
Length = 591
Score = 154 bits (373), Expect = 5e-36
Identities = 72/134 (53%), Positives = 96/134 (71%)
Frame = +1
Query: 397 KLRGETIAVXLSGWVCDSQNVTEHHVQPKLYLRNLFFRTVYLLLAEINPIFVLEGDAPEL 576
+L+G+T+A+ LS WVC+SQNVTE+ VQP++YLRNL+FRT YLLL ++N +FVLEG APEL
Sbjct: 21 ELQGKTVAIDLSCWVCESQNVTEYTVQPRMYLRNLYFRTCYLLLMDVNVVFVLEGRAPEL 80
Query: 577 KRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKRFKNVLKECETLLKSMGVICLKGSG 756
K +A RNA+QF+GA P++ R RF + LK CE +L +G+ C+ G G
Sbjct: 81 KYKTIAARNALQFKGAKPKNGAKTK-------DRSRFNHTLKRCEEMLSLLGLACVTGEG 133
Query: 757 EAEATCAQLNAEGV 798
EAEA CAQLN G+
Sbjct: 134 EAEALCAQLNETGL 147
>UniRef50_Q9U9Q6 Cluster: GM10765p; n=3; Sophophora|Rep: GM10765p -
Drosophila melanogaster (Fruit fly)
Length = 726
Score = 153 bits (372), Expect = 6e-36
Identities = 74/157 (47%), Positives = 106/157 (67%), Gaps = 2/157 (1%)
Frame = +1
Query: 334 RKLWNFITVLL**YV*MKWV*KLRGETIAVXLSGWVCDSQNVTEHHVQPKLYLRNLFFRT 513
++LW +T + K + +LRG+ +A+ L+GWVC+S NV ++ V P+ +L+NLFFRT
Sbjct: 4 KELWGVLTP----HCERKPINELRGKKVAIDLAGWVCESLNVVDYFVHPRHHLKNLFFRT 59
Query: 514 VYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKAC--SSEKLPNVSRKRF 687
YL+ ++ P+FVLEG AP+LK V+A RN +QFRG P++ C S + R RF
Sbjct: 60 CYLIWEQVTPVFVLEGVAPKLKSQVIAKRNELQFRGVKPKNSPECTQSQPSKGDKGRSRF 119
Query: 688 KNVLKECETLLKSMGVICLKGSGEAEATCAQLNAEGV 798
+VLK+CETLL SMG+ C++G GEAEA CA LN G+
Sbjct: 120 NHVLKQCETLLLSMGIQCVQGPGEAEAYCAFLNKHGL 156
>UniRef50_Q7QCK4 Cluster: ENSANGP00000021102; n=2; Culicidae|Rep:
ENSANGP00000021102 - Anopheles gambiae str. PEST
Length = 500
Score = 149 bits (360), Expect = 2e-34
Identities = 74/158 (46%), Positives = 101/158 (63%), Gaps = 3/158 (1%)
Frame = +1
Query: 334 RKLWNFITVLL**YV*MKWV*KLRGETIAVXLSGWVCDSQNVTEHHVQPKLYLRNLFFRT 513
+ LWN +T ++ K + +L + +A+ LSGWVC+S NV ++ V P+ YLRNLFFRT
Sbjct: 4 KDLWNLLTP----HMERKPLFELSNKVVAIDLSGWVCESLNVVDYFVHPRFYLRNLFFRT 59
Query: 514 VYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKAC---SSEKLPNVSRKR 684
YLL I P+FVLEG AP LK V+ RN +QFRGA P+ C + K R R
Sbjct: 60 CYLLQTGITPVFVLEGTAPPLKYGVIVKRNQMQFRGARPKKIANCDKATPAKPTEQKRNR 119
Query: 685 FKNVLKECETLLKSMGVICLKGSGEAEATCAQLNAEGV 798
F +VLK+CE LL +MG++C++ GEAEA CA LN + +
Sbjct: 120 FHHVLKQCEELLSAMGLVCVQAPGEAEALCAYLNRDNL 157
>UniRef50_UPI00015B61EE Cluster: PREDICTED: similar to CG10670-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG10670-PA - Nasonia vitripennis
Length = 736
Score = 135 bits (326), Expect = 2e-30
Identities = 73/155 (47%), Positives = 99/155 (63%)
Frame = +1
Query: 334 RKLWNFITVLL**YV*MKWV*KLRGETIAVXLSGWVCDSQNVTEHHVQPKLYLRNLFFRT 513
+ LWN ++ L K + +L+G+ IA+ LS WV DSQ+VT++ QPK++LRNLFFRT
Sbjct: 4 KDLWNILSPLSE----RKPLFELQGKAIAIDLSCWVVDSQSVTDNIAQPKMHLRNLFFRT 59
Query: 514 VYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKRFKN 693
Y LL +I P+FVLEG AP LK + +A RN ++ ++ K R RF
Sbjct: 60 SYFLLHDIFPVFVLEGAAPTLKHNTIAKRNDIRHGREIKKTNK--------KAGRSRFNY 111
Query: 694 VLKECETLLKSMGVICLKGSGEAEATCAQLNAEGV 798
VLKECE +LK MG+ C+KG GEAEA CA LN +G+
Sbjct: 112 VLKECEEMLKYMGLTCVKGYGEAEAMCAYLNEDGL 146
>UniRef50_UPI0000DB6CF0 Cluster: PREDICTED: similar to XPG-like
endonuclease CG10670-PA; n=1; Apis mellifera|Rep:
PREDICTED: similar to XPG-like endonuclease CG10670-PA -
Apis mellifera
Length = 614
Score = 135 bits (326), Expect = 2e-30
Identities = 70/155 (45%), Positives = 103/155 (66%)
Frame = +1
Query: 334 RKLWNFITVLL**YV*MKWV*KLRGETIAVXLSGWVCDSQNVTEHHVQPKLYLRNLFFRT 513
+ LWN ++ L K + +L+G+TIA+ LS WV DSQ + +H+VQPK+YLRNL+FRT
Sbjct: 4 KDLWNILSPLCE----RKPLFELQGKTIAIDLSCWVVDSQTIVDHYVQPKMYLRNLYFRT 59
Query: 514 VYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKRFKN 693
++LL+ I P+FVLEG AP LK + +A RN ++ + EK +K R +FK
Sbjct: 60 IFLLMQGILPVFVLEGKAPALKYNTIAKRNDIR----SGFQEKKSIQKK----GRTQFKK 111
Query: 694 VLKECETLLKSMGVICLKGSGEAEATCAQLNAEGV 798
+L EC+ +L+ MG+ C++G GEAEA CA LN +G+
Sbjct: 112 ILNECKEMLEYMGLACVQGHGEAEAMCAYLNEDGL 146
>UniRef50_Q6ZN37 Cluster: CDNA FLJ16464 fis, clone BRHIP2012360;
n=19; Eutheria|Rep: CDNA FLJ16464 fis, clone
BRHIP2012360 - Homo sapiens (Human)
Length = 908
Score = 100 bits (240), Expect = 6e-20
Identities = 58/133 (43%), Positives = 86/133 (64%), Gaps = 1/133 (0%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDSQNVTEHHVQP-KLYLRNLFFRTVYLLLAEINPIFVLEGDAPEL 576
L G+TIAV LS WVC++Q V + K +LRNLFFR YL ++ +FV+EG+ P+L
Sbjct: 22 LGGKTIAVDLSLWVCEAQTVKKMMGSVMKPHLRNLFFRISYLTQMDVKLVFVMEGEPPKL 81
Query: 577 KRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKRFKNVLKECETLLKSMGVICLKGSG 756
K DV++ RN ++ G++ +S S+K R FK+VL+EC +L+ +G+ ++ +G
Sbjct: 82 KADVISKRNQTRY-GSSGKS----WSQK---TGRSHFKSVLRECLHMLECLGIPWVQAAG 133
Query: 757 EAEATCAQLNAEG 795
EAEA CA LNA G
Sbjct: 134 EAEAMCAYLNAGG 146
>UniRef50_UPI0000F1DE87 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 565
Score = 77.0 bits (181), Expect = 9e-13
Identities = 39/101 (38%), Positives = 62/101 (61%)
Frame = +1
Query: 496 NLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVS 675
NLFFR L L + +FV+EG+AP++K + M+ R ++F G +S + + N +
Sbjct: 4 NLFFRVSSLTLMGVKLVFVMEGEAPKIKAETMSKRTEMRFGGTKAKS----IPKPVKNTN 59
Query: 676 RKRFKNVLKECETLLKSMGVICLKGSGEAEATCAQLNAEGV 798
R RF VL+EC +L +GV + +GEAEA CA L+++G+
Sbjct: 60 RGRFNAVLRECAQMLDCLGVPWVTAAGEAEAMCAFLDSQGL 100
>UniRef50_UPI0000ECCA49 Cluster: CDNA FLJ16464 fis, clone
BRHIP2012360.; n=5; Tetrapoda|Rep: CDNA FLJ16464 fis,
clone BRHIP2012360. - Gallus gallus
Length = 538
Score = 70.5 bits (165), Expect = 8e-11
Identities = 38/87 (43%), Positives = 56/87 (64%)
Frame = +1
Query: 535 INPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKRFKNVLKECET 714
I +FV+EG+AP+LK D M+ RN +++ GA+ + A R FK++LKEC
Sbjct: 3 IKLVFVMEGEAPKLKADTMSKRNEIRY-GASNKHGVA-------RTGRSSFKSILKECLQ 54
Query: 715 LLKSMGVICLKGSGEAEATCAQLNAEG 795
LL+ +GV ++ +GEAEA CA LNA+G
Sbjct: 55 LLECLGVPWVQAAGEAEAMCAYLNAKG 81
>UniRef50_Q2VQ32 Cluster: Single strand DNA repair-like protein;
n=5; Magnoliophyta|Rep: Single strand DNA repair-like
protein - Triticum monococcum (Einkorn wheat) (Small
spelt)
Length = 646
Score = 68.9 bits (161), Expect = 2e-10
Identities = 54/146 (36%), Positives = 75/146 (51%), Gaps = 14/146 (9%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDSQNV----TEHHVQPKLYLRNLFFRTVYLLLAEIN--PIFVLEG 561
LRG +AV LS W+ + H +P ++RN FFRT+ L A++ P+FV++G
Sbjct: 23 LRGRRVAVDLSFWIVSHSTAIRARSPHARRP--HVRNTFFRTLSLF-AKMGAFPVFVVDG 79
Query: 562 DAPELKRDVMATRNAVQFRGA-----APRSEKACSSEKLPNVSRKR---FKNVLKECETL 717
+ LK A R FRG+ A S +A P + R F +K+C L
Sbjct: 80 EPSPLKSQARAARF---FRGSGVDPPASSSAEAEGEASAPAPVKARNAIFTRCVKDCVEL 136
Query: 718 LKSMGVICLKGSGEAEATCAQLNAEG 795
LK++G+ L GEAEA CAQLN EG
Sbjct: 137 LKNLGMPVLWAKGEAEALCAQLNNEG 162
>UniRef50_Q9M2Z3 Cluster: Putative uncharacterized protein
T21J18_170; n=1; Arabidopsis thaliana|Rep: Putative
uncharacterized protein T21J18_170 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 337
Score = 68.1 bits (159), Expect = 4e-10
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDSQNVTEHH--VQPKLYLRNLFFRTVYLLLAEINPIFVLEGDAPE 573
L+ + + V LS W+ + V + + + K+YLR F R L+ + I V +G P
Sbjct: 22 LQNKRVCVDLSCWMVELHKVNKSYCATKEKVYLRGFFHRLRALIALNCSIILVSDGAIPG 81
Query: 574 LKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKRFKNVLKECETLLKSMGVICLKGS 753
+K R +F A E + + N+ + F ++KE + + ++G++CL G
Sbjct: 82 IKVPTYKRRLKARFEIADDGVEPSKETSLKRNMGSE-FSCIIKEAKVIASTLGILCLDGI 140
Query: 754 GEAEATCAQLNAEGVC 801
EAEA CA LN+E +C
Sbjct: 141 EEAEAQCALLNSESLC 156
>UniRef50_UPI0000162BF3 Cluster: DNA repair protein, putative; n=1;
Arabidopsis thaliana|Rep: DNA repair protein, putative -
Arabidopsis thaliana
Length = 570
Score = 66.9 bits (156), Expect = 9e-10
Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDSQNVTEHHVQPKLYLRNLFFRTVYLLLA-EINPIFVLEGDAPEL 576
LR + +AV LS W+ + + V K +LR FFRT+ L P+FV++G L
Sbjct: 23 LRNKRVAVDLSFWIVQHETAVKGFVL-KPHLRLTFFRTINLFSKFGAYPVFVVDGTPSPL 81
Query: 577 KRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSR-KRFKNVLKECETLLKSMGVICLKGS 753
K +R FR + + + +V R K F ++EC LL+ +G+ LK +
Sbjct: 82 KSQARISRF---FRSSGIDTCNLPVIKDGVSVERNKLFSEWVRECVELLELLGIPVLKAN 138
Query: 754 GEAEATCAQLNAEG 795
GEAEA CAQLN++G
Sbjct: 139 GEAEALCAQLNSQG 152
>UniRef50_Q9LPD2 Cluster: F22M8.2 protein; n=4; core
eudicotyledons|Rep: F22M8.2 protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 497
Score = 66.9 bits (156), Expect = 9e-10
Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDSQNVTEHHVQPKLYLRNLFFRTVYLLLA-EINPIFVLEGDAPEL 576
LR + +AV LS W+ + + V K +LR FFRT+ L P+FV++G L
Sbjct: 23 LRNKRVAVDLSFWIVQHETAVKGFVL-KPHLRLTFFRTINLFSKFGAYPVFVVDGTPSPL 81
Query: 577 KRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSR-KRFKNVLKECETLLKSMGVICLKGS 753
K +R FR + + + +V R K F ++EC LL+ +G+ LK +
Sbjct: 82 KSQARISRF---FRSSGIDTCNLPVIKDGVSVERNKLFSEWVRECVELLELLGIPVLKAN 138
Query: 754 GEAEATCAQLNAEG 795
GEAEA CAQLN++G
Sbjct: 139 GEAEALCAQLNSQG 152
>UniRef50_Q8W5R1 Cluster: Single-strand DNA endonuclease-1; n=5;
Magnoliophyta|Rep: Single-strand DNA endonuclease-1 -
Oryza sativa subsp. japonica (Rice)
Length = 641
Score = 64.9 bits (151), Expect = 4e-09
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 7/141 (4%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCD--SQNVTEHHVQPKLYLRNLFFRTVYLLLAEINPIFVLEGDAPE 573
L+ + + V LS W+ S N + + K+YL+NLF R LL +FV +G P
Sbjct: 22 LQNKKVCVDLSCWLVQMYSANRSPAFAKDKVYLKNLFHRIRALLALNCTLLFVTDGAIPS 81
Query: 574 LKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKR-----FKNVLKECETLLKSMGVI 738
LK R AA S++ S P++S +R F ++KE + L ++G+
Sbjct: 82 LKLATYRRRLG-SISHAAKESDQPNSH---PSISLRRNKGSEFSCMIKEAKRLGMALGIP 137
Query: 739 CLKGSGEAEATCAQLNAEGVC 801
CL G EAEA CA L+ E +C
Sbjct: 138 CLDGLEEAEAQCASLDLESLC 158
>UniRef50_Q76F73 Cluster: Flap endonuclease-1; n=2;
Agaricomycotina|Rep: Flap endonuclease-1 - Coprinus
cinereus (Inky cap fungus) (Hormographiella
aspergillata)
Length = 458
Score = 58.0 bits (134), Expect = 4e-07
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
Frame = +1
Query: 445 DSQNVTEHHVQPKLYLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATR--NAVQFR 618
D + +T + +L F+RT+ ++ I P +V +G PELK+ V++ R + +
Sbjct: 50 DGEMLTNDAGETTSHLMGFFYRTIRIVENGIKPAYVFDGKPPELKKGVLSKRFEKREEAK 109
Query: 619 GAAPRSEKACSSEKLPNVSRKRFKNVL---KECETLLKSMGVICLKGSGEAEATCAQLNA 789
+++ ++E + SR+ K +EC+ LL+ M V C+ EAEA CA+L
Sbjct: 110 EEGEEAKEIGTAEDVDRFSRRTVKVTKQHNEECQKLLRLMSVPCVIAPSEAEAQCAELAR 169
Query: 790 EG 795
G
Sbjct: 170 GG 171
>UniRef50_Q568J1 Cluster: Zgc:110269; n=4; Danio rerio|Rep:
Zgc:110269 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 333
Score = 56.4 bits (130), Expect = 1e-06
Identities = 41/98 (41%), Positives = 50/98 (51%)
Frame = +1
Query: 490 LRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSEKLPN 669
L LF+RT+ L +I P+FVL+G P KR V+ R Q G SS + PN
Sbjct: 38 LAGLFYRTLAFLEHDIKPVFVLDGKPPNQKRAVLEKR--AQSTG--------WSSSQGPN 87
Query: 670 VSRKRFKNVLKECETLLKSMGVICLKGSGEAEATCAQL 783
F +EC LL MGV C+K GEAEA CA L
Sbjct: 88 TG-SAFN---QECLRLLHLMGVPCIKAPGEAEALCAHL 121
>UniRef50_UPI0000E4749C Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1102
Score = 56.0 bits (129), Expect = 2e-06
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDSQNVTEHHVQPKL---YLRNLFFRTVYLLLAEINPIFVLEGDAP 570
L+G+ IAV L+ W+ +SQ +Q ++ +LRNLFFRT L + +FV++G P
Sbjct: 22 LKGKKIAVDLAIWLVESQVTGMKMMQGRVSKPHLRNLFFRTSIFLRLGVKLVFVIDGTPP 81
Query: 571 ELKRDVMATRNAVQFRG 621
ELK + +A RN V+ G
Sbjct: 82 ELKWEEIARRNEVRLGG 98
>UniRef50_Q4FYU7 Cluster: Flap endonuclease-1 (FEN-1), putative;
n=5; Trypanosomatidae|Rep: Flap endonuclease-1 (FEN-1),
putative - Leishmania major strain Friedlin
Length = 395
Score = 56.0 bits (129), Expect = 2e-06
Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 5/108 (4%)
Frame = +1
Query: 487 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATR--NAVQFRGAAPRSEKACSSEK 660
+L LF RT+ ++ I PI+V +G P+LK D + R A + A +++ A E
Sbjct: 67 HLNGLFARTLRMIDEGIKPIYVFDGKPPKLKADELEMRRQKAAEAERAFEKAKDAGDDEM 126
Query: 661 LPNVSRKRF---KNVLKECETLLKSMGVICLKGSGEAEATCAQLNAEG 795
+ +S++ ++ + E + LL+ MG+ ++ EAEA CA+L +G
Sbjct: 127 MEKMSKRTVRVSRDQIDESKKLLRLMGIPVIQAPSEAEAQCAELVKKG 174
>UniRef50_Q75LI2 Cluster: Flap endonuclease 1b; n=8;
Magnoliophyta|Rep: Flap endonuclease 1b - Oryza sativa
subsp. japonica (Rice)
Length = 412
Score = 55.6 bits (128), Expect = 2e-06
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Frame = +1
Query: 487 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKA--CSSEK 660
+L+ + RTV +L A I P+FV +G+ P++K+ +A R +++ G++ +A E
Sbjct: 64 HLQGMLNRTVRILEAGIKPVFVFDGEPPDMKKKELAKR-SLKRDGSSEDLNRAIEVGDED 122
Query: 661 LPNVSRKRFKNVLK----ECETLLKSMGVICLKGSGEAEATCAQL 783
L KR V K +C+ LL MGV ++ GEAEA CA L
Sbjct: 123 LIEKFSKRTVKVTKKHNEDCKRLLSLMGVPVVQAPGEAEAQCAAL 167
>UniRef50_A3FPN7 Cluster: Flap endonuclease 1; n=2;
Cryptosporidium|Rep: Flap endonuclease 1 -
Cryptosporidium parvum Iowa II
Length = 490
Score = 55.2 bits (127), Expect = 3e-06
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 5/120 (4%)
Frame = +1
Query: 454 NVTEHHVQPKLYLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAA-- 627
N+T + ++ + RT LL A I P+FV +G PE+K+D + R+ + + A
Sbjct: 54 NLTNSSGESTSHINGMLSRTTRLLEAGIKPVFVFDGAPPEMKKDELTKRDERREKALAEL 113
Query: 628 PRSEKACSSEKLPNVSRKRF---KNVLKECETLLKSMGVICLKGSGEAEATCAQLNAEGV 798
++++ E + S + K +++ + LL +G+ C+ EAEA CA+L +G+
Sbjct: 114 EKAQEIGDEELIKKQSVRTIHVTKKQVEDVKKLLGFLGMPCIDAPSEAEAQCAELCKDGL 173
>UniRef50_UPI000049A186 Cluster: FEN-1 nuclease; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: FEN-1 nuclease - Entamoeba
histolytica HM-1:IMSS
Length = 376
Score = 54.8 bits (126), Expect = 4e-06
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Frame = +1
Query: 502 FFRTVYLLLAEINPIFVLEGDAPELK------RDVMATRNAVQFRGAAPRSEKACSSEKL 663
F+RT+ L+ + I PI+V +G PE+K R A + Q A +K ++KL
Sbjct: 69 FYRTIKLIESGIKPIYVFDGKPPEMKDGELHKRKENAQKAQEQLDKALEEGDKE-QAKKL 127
Query: 664 PNVSRKRFKNVLKECETLLKSMGVICLKGSGEAEATCAQLNAEGVC 801
+ + K E + LL+ MG+ C++ + EAE TCA L G C
Sbjct: 128 MKRTARMTKEQSDEVKKLLQLMGIPCIEANCEAEGTCAALVKAGKC 173
>UniRef50_A2GNP0 Cluster: XPG I-region family protein; n=1;
Trichomonas vaginalis G3|Rep: XPG I-region family
protein - Trichomonas vaginalis G3
Length = 335
Score = 54.8 bits (126), Expect = 4e-06
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 7/111 (6%)
Frame = +1
Query: 487 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRS-EKACSS--- 654
+L+ + RTV L+ + + P++V +G PE+K +A R ++ R A + EKA S
Sbjct: 32 HLQGVLSRTVRLIESGVKPVYVFDGKPPEMKGAELAKR--LERREEAQKELEKAIESGDQ 89
Query: 655 EKLPNVSRKRF---KNVLKECETLLKSMGVICLKGSGEAEATCAQLNAEGV 798
E + SR+ K ++EC+ LL+ +GV + EAEA CA LN G+
Sbjct: 90 EAIDKFSRRTVHLDKTQVEECKQLLECLGVPYVDAPCEAEAECAALNKAGL 140
>UniRef50_Q9SXQ6 Cluster: Flap endonuclease 1a; n=14; Eukaryota|Rep:
Flap endonuclease 1a - Oryza sativa subsp. japonica
(Rice)
Length = 380
Score = 54.8 bits (126), Expect = 4e-06
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
Frame = +1
Query: 487 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATR-----NAVQFRGAAPRSEKACS 651
+L+ +F RT+ LL A I P++V +G P+LK+ +A R +A + A +
Sbjct: 64 HLQGMFNRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKREDATKELTEAVEEGDKDA 123
Query: 652 SEKLPNVSRKRFKNVLKECETLLKSMGVICLKGSGEAEATCAQL 783
EK + K K +EC+ LL+ MGV ++ EAEA CA L
Sbjct: 124 IEKFSKRTVKVTKQHNEECKRLLRLMGVPVVEAPCEAEAECAAL 167
>UniRef50_P39748 Cluster: Flap endonuclease 1; n=22; Eumetazoa|Rep:
Flap endonuclease 1 - Homo sapiens (Human)
Length = 380
Score = 54.0 bits (124), Expect = 7e-06
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Frame = +1
Query: 487 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAP-RSEKACSSEKL 663
+L +F+RT+ ++ I P++V +G P+LK +A R+ + + +A +E+
Sbjct: 63 HLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAEQE 122
Query: 664 PNVSRKRFKNVLK----ECETLLKSMGVICLKGSGEAEATCAQLNAEG 795
KR V K EC+ LL MG+ L EAEA+CA L G
Sbjct: 123 VEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAG 170
>UniRef50_Q4A3A7 Cluster: Putative endonuclease; n=1; Emiliania
huxleyi virus 86|Rep: Putative endonuclease - Emiliania
huxleyi virus 86
Length = 358
Score = 53.2 bits (122), Expect = 1e-05
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Frame = +1
Query: 487 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAA--PRSEKACSSEK 660
+L +F+RT+ L+ A I P++V +G P LK+ + RN Q + + ++ A EK
Sbjct: 64 HLTGIFYRTIRLIEAGIKPVYVFDGKPPVLKKKELDKRNERQAQALSELKLTDDATEVEK 123
Query: 661 LPNVSRKRFKNVLKECETLLKSMGVICLKGSGEAEATCA 777
S + + +E + +L MG+ ++ EAEATCA
Sbjct: 124 QEKRSVRATREHSEEVKKMLTLMGIPVVQAPCEAEATCA 162
>UniRef50_Q54NU0 Cluster: XPG; n=1; Dictyostelium discoideum
AX4|Rep: XPG - Dictyostelium discoideum AX4
Length = 384
Score = 53.2 bits (122), Expect = 1e-05
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
Frame = +1
Query: 487 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNA--VQFRGAAPRSEKACSSEK 660
+L+ +F+RT+ L+ I PI+V +G AP LK +A R A + + + + ++E+
Sbjct: 64 HLQGMFYRTIKLISRGIKPIYVFDGSAPVLKSGELAKRQARRKEAKENLKEATEVGTNEE 123
Query: 661 LPNVSRKRFKNVLK---ECETLLKSMGVICLKGSGEAEATCAQLNAEG 795
+ +++ K +C LL MGV +K EAEA CA++ +G
Sbjct: 124 VQKFAKRVITVTRKQNEDCIKLLTLMGVPIVKAPCEAEAQCAEIVKKG 171
>UniRef50_A7RUB0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 194
Score = 52.8 bits (121), Expect = 2e-05
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDSQNVTEHHVQP-KLYLRNLFFRTVYLLLAEINPIFVLEGDAPEL 576
LRG+ + V LS W+C++ K +LRNLFFR L + +FV++G+ PEL
Sbjct: 22 LRGKRLCVDLSCWICEANGAKGLKTNVLKPHLRNLFFRIWQLTRCGVKLVFVVDGEPPEL 81
Query: 577 KRDVMATRNAVQFRGAAPRSEKAC 648
K + + R +F A C
Sbjct: 82 KWEAIIKRTQARFGSAGNAVVDGC 105
>UniRef50_Q7R289 Cluster: GLP_422_59630_60715; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_422_59630_60715 - Giardia lamblia
ATCC 50803
Length = 361
Score = 51.6 bits (118), Expect = 4e-05
Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Frame = +1
Query: 487 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAP----RSEKACSS 654
+L L + + L A I PIFV +G PE K+ + R Q R AA ++E+ +
Sbjct: 64 HLVGLLAKVIRLAEAGIKPIFVFDGKPPEDKQGELEKRR--QAREAAELEQQKAEEEGNL 121
Query: 655 EKLPNVSRKRFKNVLKEC---ETLLKSMGVICLKGSGEAEATCAQLNAEGVC 801
E+ +SR+ K + C E LL ++G+ + +GEAEA C + E VC
Sbjct: 122 ERAKQLSRRTVKVTQQHCKQAERLLDTLGIPYVVAAGEAEAQCVAMAKERVC 173
>UniRef50_A7RTI4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 250
Score = 51.2 bits (117), Expect = 5e-05
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Frame = +1
Query: 478 PKLYLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSE 657
P +L LF R LL + P+FV +G P LK+ + + + R ++ SE
Sbjct: 51 PNAHLFVLFHRLCKLLFYRVKPVFVFDGGVPVLKKKTLVRAYLEEMQTNLNREQRTLQSE 110
Query: 658 KL--PNVSRKRFKNVLKECETLLKSMGVICLKGSGEAEATCAQLNAEG 795
+ S + +L E + LL+ GV L EAEA CA L+ G
Sbjct: 111 RARQARASAEVSTEMLNESQELLRLFGVPFLVSPMEAEAQCAFLDMTG 158
>UniRef50_P26793 Cluster: Structure-specific endonuclease RAD27;
n=55; Fungi/Metazoa group|Rep: Structure-specific
endonuclease RAD27 - Saccharomyces cerevisiae (Baker's
yeast)
Length = 382
Score = 50.8 bits (116), Expect = 7e-05
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Frame = +1
Query: 445 DSQNVTEHHVQPKLYLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGA 624
D +T + +L +F+RT+ ++ I P +V +G P+LK + R++ +
Sbjct: 50 DGGQLTNEAGETTSHLMGMFYRTLRMIDNGIKPCYVFDGKPPDLKSHELTKRSSRRVETE 109
Query: 625 APRSEKACSSEKLPNVSR--KRFKNVLKECETLLKSMGVICLKGSGEAEATCAQLNAEG 795
+E EK+ R K K +E + LL MG+ + EAEA CA+L +G
Sbjct: 110 KKLAEATTELEKMKQERRLVKVSKEHNEEAQKLLGLMGIPYIIAPTEAEAQCAELAKKG 168
>UniRef50_A7F0Q6 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 387
Score = 50.0 bits (114), Expect = 1e-04
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Frame = +1
Query: 457 VTEHHVQPKLYLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMA---TRNAVQFRGAA 627
+T + +L +F+RT+ ++ I P++V +G P+LK +A R A G
Sbjct: 65 LTNEEGETTSHLMGMFYRTLRIVDNGIKPVYVFDGAPPKLKSGELAKRFQRKATATEGLE 124
Query: 628 PRSEKACSSEKLPNVSRKRFKNVLK---ECETLLKSMGVICLKGSGEAEATCAQLNAEG 795
E ++E + SR+ + + EC+ LLK MG+ + EAEA CA L G
Sbjct: 125 EAKETG-TAEDIEKFSRRTVRVTREHNAECQKLLKLMGIPFIIAPTEAEAQCAVLARAG 182
>UniRef50_Q976H6 Cluster: Flap structure-specific endonuclease;
n=25; Archaea|Rep: Flap structure-specific endonuclease
- Sulfolobus tokodaii
Length = 351
Score = 48.8 bits (111), Expect = 3e-04
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Frame = +1
Query: 487 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQ-------FRGAAPRSEKA 645
+L LF+RT+ +L I PI+V +G PE K + R V+ + S K
Sbjct: 57 HLNGLFYRTISILEEGIIPIYVFDGKPPEQKAQELERRKKVKEEAEKKLEQAKTEGSIKT 116
Query: 646 CSSEKLPNVSRKRFKNVLKECETLLKSMGVICLKGSGEAEATCAQLNAEGV 798
+K +S + + +E + LLK+MG+ ++ E EA A +N G+
Sbjct: 117 SELKKYAQMSIRLTNEMAEESKELLKAMGIPVVQAPSEGEAEAAYINILGL 167
>UniRef50_Q8SS91 Cluster: STRUCTURE-SPECIFIC ENDONUCLEASE OF THE
XPG/RAD2 FAMILY; n=3; Eukaryota|Rep: STRUCTURE-SPECIFIC
ENDONUCLEASE OF THE XPG/RAD2 FAMILY - Encephalitozoon
cuniculi
Length = 345
Score = 47.2 bits (107), Expect = 8e-04
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Frame = +1
Query: 478 PKLYLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACS-- 651
P +L F+RT+ ++ I P++V +G PE+K + R + R AA R + S
Sbjct: 59 PTSHLVGFFYRTIRMVELGITPVYVFDGVPPEIKMKELEKRK--ERRAAADREYREASEV 116
Query: 652 -SEKLPNVSRKRFKNV----LKECETLLKSMGVICLKGSGEAEATCAQL 783
++L + KR V + EC+ LL MG+ EAEA CA L
Sbjct: 117 GDKELMEMYDKRKTKVTGVHVDECKRLLGLMGIPFETAPSEAEAYCALL 165
>UniRef50_UPI0000DA3193 Cluster: PREDICTED: similar to excision
repair cross-complementing rodent repair deficiency,
complementation group 5; n=4; Rattus norvegicus|Rep:
PREDICTED: similar to excision repair
cross-complementing rodent repair deficiency,
complementation group 5 - Rattus norvegicus
Length = 1072
Score = 46.4 bits (105), Expect = 0.001
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDS-QNVTEHHVQP--KLYLRNLFFRTVYLLLAEINPIFVLEGDAP 570
L G+ +AV +S W+ + + V + H +L LF R LL I PIFV +GDAP
Sbjct: 22 LEGKVLAVDISIWLNQALKGVRDRHGNAIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAP 81
Query: 571 ELKRDVMATR 600
LK+ +A R
Sbjct: 82 LLKKQTLAKR 91
>UniRef50_Q013G9 Cluster: FEN-1; n=1; Ostreococcus tauri|Rep: FEN-1
- Ostreococcus tauri
Length = 428
Score = 45.2 bits (102), Expect = 0.003
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
Frame = +1
Query: 451 QNVTEHHVQPKLYLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRN--AVQFRGA 624
Q +T + +L+ + RT +L A I P++V +G P +K +A R + A
Sbjct: 91 QTLTNEAGEVTSHLQGMLMRTSRMLEAGIKPVYVFDGKPPTMKGGELAKRKDKREEAEAA 150
Query: 625 APRSEKACSSEKLPNVSRKRF---KNVLKECETLLKSMGVICLKGSGEAEATCAQLNAEG 795
+ +A + E++ +S++ K E L + +G+ + EAEATCA + G
Sbjct: 151 LKAAREAGNQEEVEKLSKRTVRVSKEQSMEVMKLAQLLGIPAFEAPCEAEATCAAMCKAG 210
Query: 796 V 798
+
Sbjct: 211 L 211
>UniRef50_Q4UFP0 Cluster: 5'-3' exonuclease, putative; n=2;
Theileria|Rep: 5'-3' exonuclease, putative - Theileria
annulata
Length = 506
Score = 44.8 bits (101), Expect = 0.004
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Frame = +1
Query: 487 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNA------VQFRGAAPRSEKAC 648
++ L R LL I P+FV + PELK + R F+ A +K
Sbjct: 65 HIYGLMNRCSKLLEYGIKPVFVFDSKPPELKSKTLDKRRQKREEAKTDFKKAISEGDKE- 123
Query: 649 SSEKLPNVSRKRFKNVLKECETLLKSMGVICLKGSGEAEATCAQLNAEGVC 801
S++KL + K K++ + LL+ MG+ ++ EAEA CA L + +C
Sbjct: 124 SAKKLVGRTVKVTKDMNDSAKKLLRLMGIPVIEALEEAEAQCAYLVTKNLC 174
>UniRef50_Q6C8E7 Cluster: Similar to sp|P28706 Schizosaccharomyces
pombe DNA repair protein rad13; n=1; Yarrowia
lipolytica|Rep: Similar to sp|P28706 Schizosaccharomyces
pombe DNA repair protein rad13 - Yarrowia lipolytica
(Candida lipolytica)
Length = 1115
Score = 44.8 bits (101), Expect = 0.004
Identities = 25/67 (37%), Positives = 33/67 (49%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDSQNVTEHHVQPKLYLRNLFFRTVYLLLAEINPIFVLEGDAPELK 579
L G +AV S W+ T + +L F R + LL I P+FV +G APELK
Sbjct: 22 LGGNRLAVDASIWIYQFLKTTRGAGKKNAHLVGFFRRILKLLFLGIKPVFVFDGVAPELK 81
Query: 580 RDVMATR 600
R +A R
Sbjct: 82 RKTVARR 88
>UniRef50_Q58839 Cluster: Flap structure-specific endonuclease; n=6;
Methanococcales|Rep: Flap structure-specific
endonuclease - Methanococcus jannaschii
Length = 326
Score = 44.8 bits (101), Expect = 0.004
Identities = 27/105 (25%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Frame = +1
Query: 499 LFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSR 678
+F++T++LL +I PI+V +G+ P+LK R ++ + A + ++A E ++
Sbjct: 61 VFYKTIHLLENDITPIWVFDGEPPKLKEKTRKVRREMKEK-AELKMKEAIKKEDFEEAAK 119
Query: 679 --KRFK----NVLKECETLLKSMGVICLKGSGEAEATCAQLNAEG 795
KR +++ C+ LL MG+ ++ E EA + + +G
Sbjct: 120 YAKRVSYLTPKMVENCKYLLSLMGIPYVEAPSEGEAQASYMAKKG 164
>UniRef50_P28715 Cluster: DNA-repair protein complementing XP-G
cells; n=27; Eumetazoa|Rep: DNA-repair protein
complementing XP-G cells - Homo sapiens (Human)
Length = 1186
Score = 44.8 bits (101), Expect = 0.004
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDS-QNVTEHHVQP--KLYLRNLFFRTVYLLLAEINPIFVLEGDAP 570
L G+ +AV +S W+ + + V + H +L LF R LL I PIFV +GDAP
Sbjct: 22 LEGKILAVDISIWLNQALKGVRDRHGNSIENPHLLTLFHRLCKLLFFRIRPIFVFDGDAP 81
Query: 571 ELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKR 684
LK+ + R R S+ ++EKL KR
Sbjct: 82 LLKKQTLVKRRQ---RKDLASSDSRKTTEKLLKTFLKR 116
>UniRef50_UPI0000DB70EE Cluster: PREDICTED: similar to CG10890-PC,
isoform C; n=1; Apis mellifera|Rep: PREDICTED: similar
to CG10890-PC, isoform C - Apis mellifera
Length = 1047
Score = 44.4 bits (100), Expect = 0.006
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDS-QNVTEHHVQPK--LYLRNLFFRTVYLLLAEINPIFVLEGDAP 570
L G+ +A+ +S W+ Q + PK +L LF R LL +I PIFV +G P
Sbjct: 22 LEGKVLAIDISIWIHQVLQGYQDRFGNPKPNAHLIGLFHRICKLLYYKIKPIFVFDGGVP 81
Query: 571 ELKRDVMATR 600
LK+D +A R
Sbjct: 82 MLKKDTIALR 91
>UniRef50_UPI000058838C Cluster: PREDICTED: similar to XPGC protein;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to XPGC protein - Strongylocentrotus purpuratus
Length = 1102
Score = 44.4 bits (100), Expect = 0.006
Identities = 29/81 (35%), Positives = 42/81 (51%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDSQNVTEHHVQPKLYLRNLFFRTVYLLLAEINPIFVLEGDAPELK 579
L G+ IAV +S W+ + + +L+ LF R LL I PIFV +G P+LK
Sbjct: 22 LEGKVIAVDVSIWLNQAVLGVHGNSLSNPHLQVLFNRICKLLFYRIKPIFVFDGAPPQLK 81
Query: 580 RDVMATRNAVQFRGAAPRSEK 642
+ +A R + AA R+EK
Sbjct: 82 KQTLAARRQ-RKNLAAARTEK 101
>UniRef50_Q4AEJ2 Cluster: XPG; n=2; Gallus gallus|Rep: XPG - Gallus
gallus (Chicken)
Length = 1118
Score = 44.4 bits (100), Expect = 0.006
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDS-QNVTEHHVQP--KLYLRNLFFRTVYLLLAEINPIFVLEGDAP 570
L G+ +AV +S W+ + + V + H +L LF R LL I P+FV +G+AP
Sbjct: 22 LEGKILAVDISIWLNQAVKGVRDRHGNTIQNAHLLTLFNRLCKLLFFRIRPVFVFDGEAP 81
Query: 571 ELKRDVMATR 600
LKR +A R
Sbjct: 82 LLKRQTLAKR 91
>UniRef50_Q6L2I9 Cluster: Flap structure-specific endonuclease; n=7;
Thermoplasmatales|Rep: Flap structure-specific
endonuclease - Picrophilus torridus
Length = 338
Score = 44.0 bits (99), Expect = 0.008
Identities = 27/108 (25%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Frame = +1
Query: 487 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSE--K 660
+L +F+RT LL I P++V +G LK + + R+ ++ + E S++ K
Sbjct: 57 HLSGIFYRTSNLLENNIKPVYVFDGKPFHLKSETLRERSLIKEKNIMKLEEAIASNDDAK 116
Query: 661 LPNVSRK---RFKNVLKECETLLKSMGVICLKGSGEAEATCAQLNAEG 795
+ ++S + +++ E +TLL MG+ ++ E EA + + +G
Sbjct: 117 IRSLSSRINYITDDIVNESKTLLNLMGLPYVQAPSEGEAQASYMTLKG 164
>UniRef50_Q4SHZ0 Cluster: Chromosome 5 SCAF14581, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 5
SCAF14581, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 866
Score = 42.3 bits (95), Expect = 0.023
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDSQNVT---EHHVQPKLYLRNLFFRTVYLLLAEINPIFVLEGDAP 570
L G+ +AV +S W+ + E + +L LF R LL I P+FV +G+AP
Sbjct: 22 LEGKILAVDISIWLNQAVKGVRDREGNSVQNAHLLTLFHRICKLLFFRIRPVFVFDGEAP 81
Query: 571 ELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKR 684
LK+ +A R Q + R K ++EKL KR
Sbjct: 82 LLKKQTLALRR--QRKEELSRESKQ-TNEKLLRTFLKR 116
>UniRef50_Q8PYF6 Cluster: Flap structure-specific endonuclease; n=7;
Euryarchaeota|Rep: Flap structure-specific endonuclease
- Methanosarcina mazei (Methanosarcina frisia)
Length = 338
Score = 42.3 bits (95), Expect = 0.023
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Frame = +1
Query: 487 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKAC------ 648
+L L +RT L+ A I P+FV +G PE+K + R ++ + + E A
Sbjct: 57 HLSGLLYRTASLVEAGIKPVFVFDGKPPEMKTGTLNRRKEIR-ESSKEKWENAKAEGNLE 115
Query: 649 SSEKLPNVSRKRFKNVLKECETLLKSMGVICLKGSGEAEATCAQL 783
++ K S K ++++++ + LL MG+ ++ E EA A +
Sbjct: 116 AAYKYAQASSKVDQDIIEDSKYLLDIMGIPWIQAPCEGEAQAAHM 160
>UniRef50_P14629 Cluster: DNA-repair protein complementing XP-G
cells homolog; n=4; Xenopus|Rep: DNA-repair protein
complementing XP-G cells homolog - Xenopus laevis
(African clawed frog)
Length = 1196
Score = 41.9 bits (94), Expect = 0.031
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDSQNVT---EHHVQPKLYLRNLFFRTVYLLLAEINPIFVLEGDAP 570
L G+ +AV +S W+ + + + +L LF R LL I PIFV +G+AP
Sbjct: 22 LEGKILAVDISIWLNQAVKGARDRQGNAIQNAHLLTLFHRLCKLLFFRIRPIFVFDGEAP 81
Query: 571 ELKRDVMATR 600
LKR +A R
Sbjct: 82 LLKRQTLAKR 91
>UniRef50_P61942 Cluster: Flap structure-specific endonuclease; n=8;
Archaea|Rep: Flap structure-specific endonuclease -
Nanoarchaeum equitans
Length = 339
Score = 41.5 bits (93), Expect = 0.040
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Frame = +1
Query: 487 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATR--NAVQFRGAAPRSEKACSSEK 660
+L LF+RT+ LL I PI+V +G P+ K R + Q + K + ++
Sbjct: 58 HLSGLFYRTINLLEYGIKPIYVFDGTPPKFKIVAWEKRKKHKEQLESKYKEALKKGNIQE 117
Query: 661 LPNVSR---KRFKNVLKECETLLKSMGVICLKGSGEAEATCAQLNAEGV 798
++ K +++E + LL++MG+ ++ E EA A L +GV
Sbjct: 118 AIKYAKSLGKLDSYMVEEAKKLLEAMGIPYVQAPSEGEAEAAYLTKKGV 166
>UniRef50_A7AX58 Cluster: XPG N-terminal domain and XPG I-region
domain containing protein; n=1; Babesia bovis|Rep: XPG
N-terminal domain and XPG I-region domain containing
protein - Babesia bovis
Length = 672
Score = 41.1 bits (92), Expect = 0.053
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Frame = +1
Query: 487 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSEKLP 666
++ L R + LL I P+FV + PE K +A R ++ A EKA +
Sbjct: 65 HIAGLLNRCIRLLELGIRPVFVFDSTPPEAKSQTLAKRKLLR-EEAESSLEKAIEEDDKE 123
Query: 667 NVSR---KRFKNVLKECET---LLKSMGVICLKGSGEAEATCAQLNAEG 795
+ + + + KE E+ LL+ +GV ++ + EAEA CA L G
Sbjct: 124 AIRKYVGRTVRITQKENESAKKLLRLVGVPVIEAAEEAEAQCAYLCQRG 172
>UniRef50_Q9U0K1 Cluster: Flap endonuclease 1; n=10; Eukaryota|Rep:
Flap endonuclease 1 - Plasmodium falciparum
Length = 672
Score = 39.9 bits (89), Expect = 0.12
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Frame = +1
Query: 454 NVTEHHVQPKLYLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPR 633
N+T + ++ L R++ L+ + PI+V +G PELK + R + + A
Sbjct: 54 NLTNESGETTSHISGLMSRSIRLMENGLKPIYVFDGAPPELKGSELEKRGEKR-QKAEEL 112
Query: 634 SEKACSSEKLPNVSRKRFKNVL------KECETLLKSMGVICLKGSGEAEATCAQL 783
+KA L + ++ + V +E + LL MG+ ++ EAE+ CA L
Sbjct: 113 LKKAKEEGNLEEIKKQSGRTVRVTRKQNEEAKKLLTLMGIPIIEAPCEAESQCAFL 168
>UniRef50_A0E7S1 Cluster: Chromosome undetermined scaffold_81, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_81,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 872
Score = 39.1 bits (87), Expect = 0.22
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDS-QNVTEHHVQ-PKLYLRNLFFRTVYLLLAEINPIFVLEGDAPE 573
LRG +A+ +S W+ ++ V ++L + R ++LL I P+FV +G APE
Sbjct: 22 LRGLRVAIDVSIWMIKLLHGMSNSGVNFENVHLIGILKRIMFLLENGIKPVFVFDGPAPE 81
Query: 574 LKRDVMATR 600
LKR + R
Sbjct: 82 LKRQTLIKR 90
>UniRef50_Q4U2Q2 Cluster: XPG variant; n=7; Drosophila
melanogaster|Rep: XPG variant - Drosophila melanogaster
(Fruit fly)
Length = 1257
Score = 38.7 bits (86), Expect = 0.28
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +1
Query: 487 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSEKLP 666
+L LF R LL + P+F+ +G P+LKRD +A R Q R + L
Sbjct: 75 HLLGLFHRLCKLLYYRVRPVFIFDGCVPQLKRDTIARRQ--QQRNKLSNEADRIQALLLQ 132
Query: 667 NVSRKRF--KNVLKECETLLKS 726
++++++ + + K E LLKS
Sbjct: 133 SLAKEKVVQQALGKNAELLLKS 154
>UniRef50_O96154 Cluster: DNA repair endonuclease, putative; n=1;
Plasmodium falciparum 3D7|Rep: DNA repair endonuclease,
putative - Plasmodium falciparum (isolate 3D7)
Length = 1516
Score = 38.7 bits (86), Expect = 0.28
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Frame = +1
Query: 436 WVCDSQNVTEHHVQPKLYLRNLFF---RTVYLLLAEINPIFVLEGDAPELKRDVMATRNA 606
W+ S+N++ + +L+F R LL I PIF+ +G+ PELKR + RN
Sbjct: 62 WIDFSENISSEIKTDNIKKAHLYFFFLRICKLLYYNIRPIFIFDGNPPELKRKTIFQRN- 120
Query: 607 VQFRGAAPRSEKACSSEKLP-NVSRKRFKNVLK 702
++ R + +K ++EKL N ++ N +K
Sbjct: 121 IKKRNYEEKFKK--TAEKLVYNYYQRTLLNSMK 151
>UniRef50_Q1E1S0 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 813
Score = 38.7 bits (86), Expect = 0.28
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 415 IAVXLSGWVCDSQNVTEHHVQPKLYLRNLFFRTVYLLLAEINPIFVLEGDA-PELKRDVM 591
IA+ +S W+ +Q + + P+L R LF+R L+ ++PIFV +G PE KR +
Sbjct: 84 IAIDVSIWLFQAQ-AAQGGLNPEL--RALFYRLARLISLPVHPIFVFDGSGRPEYKRGKL 140
Query: 592 ATRN 603
RN
Sbjct: 141 VIRN 144
>UniRef50_Q2NFD4 Cluster: Flap structure-specific endonuclease; n=2;
Methanobacteriaceae|Rep: Flap structure-specific
endonuclease - Methanosphaera stadtmanae (strain DSM
3091)
Length = 328
Score = 38.7 bits (86), Expect = 0.28
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Frame = +1
Query: 487 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRG-----AAPRSEKACS 651
+L + F+T L+ +I P++V +G AP+LK++ R ++ A +
Sbjct: 57 HLNGIMFQTSTLIEKDIKPVYVFDGKAPDLKKETQEERINIKKESEKKYLEAKEVGDVVA 116
Query: 652 SEKLPNVSRKRFKNVLKECETLLKSMGVICLKGSGEAEATCAQL 783
+ K + K ++K + LL MG+ ++ E EA + +
Sbjct: 117 ARKYAARTTHLNKEIIKSSKKLLDLMGIPYVQARTEGEAQASYM 160
>UniRef50_A7ASU9 Cluster: Rad2 endonuclease, putative; n=1; Babesia
bovis|Rep: Rad2 endonuclease, putative - Babesia bovis
Length = 1002
Score = 38.3 bits (85), Expect = 0.38
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDSQNVTEHHVQPKLYLRNLFF-RTVYLLLAEINPIFVLEGDAPEL 576
LRG+ +A+ S W+ +E ++ + +FF R YLL I PIFV +G P
Sbjct: 22 LRGKKVAIDASFWISHCL-ASEAALRRGNDIYGVFFLRICYLLEKRIYPIFVFDGRTPGA 80
Query: 577 KRDVMATRNAVQFR 618
KR + RN + R
Sbjct: 81 KRRTLLMRNMSRAR 94
>UniRef50_A2DH64 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 402
Score = 38.3 bits (85), Expect = 0.38
Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Frame = +1
Query: 442 CDSQNVTEHHVQPK--LYLRNLFFRTVYLLLAEINP--IFVLEGDAPELKRDVMATRNAV 609
CD++N+T H++Q K ++ +N + + + + INP I+VL +A L R ++TR ++
Sbjct: 85 CDNKNLTIHNIQTKQVVFEQNFDDKVLCIQFSRINPQLIYVLTSNANSLIRFNLSTRESM 144
Query: 610 QFRGA 624
F G+
Sbjct: 145 VFNGS 149
>UniRef50_A0CXT3 Cluster: Chromosome undetermined scaffold_30, whole
genome shotgun sequence; n=3; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_30, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 390
Score = 38.3 bits (85), Expect = 0.38
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Frame = +1
Query: 487 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSEKLP 666
+L LF RT+ L I P++V +G P LK +A R ++ A ++E A +
Sbjct: 67 HLVGLFNRTLQFLENGIKPVWVFDGKPPLLKSGELARRKKLK-EEAQVKTELALEQGDMQ 125
Query: 667 N--VSRKR---FKNVLKE-CETLLKSMGVICLKGSGEAEATCAQLNAEG 795
+ +R +V+KE +LK MG + EAEA CA+L G
Sbjct: 126 QALLQHQRTTTISSVMKEDAIKMLKLMGCPVIIAPCEAEAQCAELCRAG 174
>UniRef50_Q4JR61 Cluster: Putative uncharacterized protein; n=1;
Babesia sp. WA1|Rep: Putative uncharacterized protein -
Babesia sp. WA1
Length = 954
Score = 37.9 bits (84), Expect = 0.50
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDSQNVTEHHVQPKLYLRNLFFRTV-YLLLAEINPIFVLEGDAPEL 576
L G A+ S W+ + V++ +++ + +FF + YLL I PIFV +G P+
Sbjct: 22 LHGRKCAIDASFWIAHAL-VSQENLRRGFDIYAIFFLKICYLLETRIRPIFVFDGIPPDA 80
Query: 577 KRDVMATRNAVQFR 618
KR + R ++ R
Sbjct: 81 KRRTLLKRKLMRER 94
>UniRef50_A5KBK9 Cluster: DNA repair endonuclease, putative; n=1;
Plasmodium vivax|Rep: DNA repair endonuclease, putative
- Plasmodium vivax
Length = 1473
Score = 37.9 bits (84), Expect = 0.50
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = +1
Query: 481 KLYLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSEK 660
K++L F R LL I PIF+ +G PELKR + RN V+ R + +K ++EK
Sbjct: 80 KVHLYFFFLRICKLLYYNIRPIFIFDGTPPELKRKTIFQRN-VKRRNHEEKFKK--TAEK 136
Query: 661 L 663
L
Sbjct: 137 L 137
>UniRef50_A7PMD6 Cluster: Chromosome chr14 scaffold_21, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_21, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1066
Score = 37.5 bits (83), Expect = 0.66
Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 3/107 (2%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDSQNVTEHHVQPKL---YLRNLFFRTVYLLLAEINPIFVLEGDAP 570
L G+ +A+ S W+ + +L F R LL P+FV +G P
Sbjct: 22 LAGKRLAIDASIWMIQFMKAMRDEKGEMVRNGHLLGFFRRICKLLFLRTKPVFVFDGGTP 81
Query: 571 ELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKRFKNVLKECE 711
LKR + R Q A + K L ++ R K + K+ E
Sbjct: 82 ALKRRTVVARRR-QRENAQAKIRKTAEKLLLNHLKAMRLKELAKDLE 127
>UniRef50_Q8STM5 Cluster: Similarity to DNA repair protein RAD2;
n=1; Encephalitozoon cuniculi|Rep: Similarity to DNA
repair protein RAD2 - Encephalitozoon cuniculi
Length = 562
Score = 37.5 bits (83), Expect = 0.66
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = +1
Query: 406 GETIAVXLSGWVCDSQNVTEHHVQPKLYLRNLFFRTVYLLLAEINPIFVLEGDAPELKRD 585
G +AV S W+C ++ + +Y + R V LL I+PIFV +G APE+KR
Sbjct: 21 GVKLAVDTSIWICQYGHLRSDDI---VYFFSK--RIVKLLYHRIHPIFVFDGKAPEMKRH 75
Query: 586 VMATR 600
+ R
Sbjct: 76 AILQR 80
>UniRef50_UPI00006CAA8D Cluster: XPG N-terminal domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: XPG
N-terminal domain containing protein - Tetrahymena
thermophila SB210
Length = 1113
Score = 37.1 bits (82), Expect = 0.87
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDS-QNVTEHHVQPK---LYLRNLFFRTVYLLLAEINPIFVLEGDA 567
L G+ +A+ +S WV + + ++L +F R LL I P+FV +G A
Sbjct: 22 LEGQRLAIDVSIWVIRMLYGFASRRMNSEFKNIHLVGIFKRLCRLLSLGIKPVFVFDGKA 81
Query: 568 PELKRDVMATR 600
PELKR + R
Sbjct: 82 PELKRHTLYLR 92
>UniRef50_Q55XC5 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 893
Score = 37.1 bits (82), Expect = 0.87
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDSQNVTEHHVQPKLYLRNLFFRTVYLLLAEINPIFVLEG-DAPEL 576
LR T+ + S W+ + V +H P +LR +FF+ LL + P+FV +G + P +
Sbjct: 34 LRALTVGIDASIWIFHAA-VPQHGENP--FLRTIFFKITALLQHPVLPVFVFDGPNKPAM 90
Query: 577 KRD 585
KR+
Sbjct: 91 KRN 93
>UniRef50_UPI000023CEE4 Cluster: hypothetical protein FG04386.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG04386.1 - Gibberella zeae PH-1
Length = 790
Score = 36.7 bits (81), Expect = 1.1
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +1
Query: 415 IAVXLSGWVCDSQNVTEHHVQPKLYLRNLFFRTVYLLLAEINPIFVLEGD-APELKRDVM 591
IA+ ++ W +Q + P++ R LF+R V LL + PIFV +G P LKR+
Sbjct: 35 IAIDVAIWQFQNQ-AAQGGTNPEI--RTLFYRLVRLLACPVEPIFVFDGPYKPALKRNKQ 91
Query: 592 ATRNA 606
++R +
Sbjct: 92 SSRGS 96
>UniRef50_Q00XT2 Cluster: 5'-3' exonuclease; n=2; Ostreococcus|Rep:
5'-3' exonuclease - Ostreococcus tauri
Length = 987
Score = 36.7 bits (81), Expect = 1.1
Identities = 23/67 (34%), Positives = 34/67 (50%)
Frame = +1
Query: 493 RNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNV 672
R F R LL I P+FV +G AP LKR A R + R +A R+ +A L +
Sbjct: 11 RGFFRRIARLLHHGITPVFVFDGAAPGLKRRTTAARRRGRARASA-RARRAAERVLLNAL 69
Query: 673 SRKRFKN 693
+R+ ++
Sbjct: 70 TRRALES 76
>UniRef50_Q4P7L5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1532
Score = 36.7 bits (81), Expect = 1.1
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDSQNVT---EHHVQPKLYLRNLFFRTVYLLLAEINPIFVLEGDAP 570
L G+ +A+ S W+ Q + ++ +R + LL + P+FV +G AP
Sbjct: 22 LEGKRLAIDSSLWLYHFQMAMRDKDGRTLSNAHILGFLWRILKLLFHGVRPVFVFDGGAP 81
Query: 571 ELKRDVMATRNAVQFRGAAPRSEKACSSEKL 663
+KR ++ R A R + A ++EKL
Sbjct: 82 AMKRKTLSGRKA---RKQGAKESHARTAEKL 109
>UniRef50_Q54AQ1 Cluster: Xeroderma pigmentosum group G (XPG) family
protein; n=1; Dictyostelium discoideum AX4|Rep:
Xeroderma pigmentosum group G (XPG) family protein -
Dictyostelium discoideum AX4
Length = 977
Score = 35.1 bits (77), Expect = 3.5
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDS-QNVTEHHVQPKLYLRNL-FFRTVYLLLA-EINPIFVLEGDAP 570
L G+T+A+ S W+ + + P L FFR + LL+ + PIFV +G P
Sbjct: 22 LEGKTLAIDASIWIHTFIRTLKNEKGDPMTNAPILGFFRRICKLLSLRVKPIFVFDGGVP 81
Query: 571 ELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKRFKN 693
LKR + R + R A EK L N +K+ K+
Sbjct: 82 YLKRRTIEERRKRRER-AEQNIEKNQRRLLLINTIKKQLKD 121
>UniRef50_Q5KPE3 Cluster: Single-stranded DNA specific
endodeoxyribonuclease, putative; n=2; Filobasidiella
neoformans|Rep: Single-stranded DNA specific
endodeoxyribonuclease, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 1323
Score = 35.1 bits (77), Expect = 3.5
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDSQNVT---EHHVQPKLYLRNLFFRTVYLLLAEINPIFVLEGDAP 570
+ G+ +A+ S W+ Q + V ++ R LL I P+FV +G AP
Sbjct: 86 MEGKRLAIDSSIWLYQFQATMRDKDGRVLVNAHVLGFLRRINKLLFHGIKPVFVFDGGAP 145
Query: 571 ELKRDVMATRNAVQFRGAAPRSEKA 645
LKR +A R + AA ++ A
Sbjct: 146 ALKRSTIAERKRKKTGAAANHAKVA 170
>UniRef50_Q6ANA1 Cluster: Putative uncharacterized protein; n=1;
Desulfotalea psychrophila|Rep: Putative uncharacterized
protein - Desulfotalea psychrophila
Length = 604
Score = 34.7 bits (76), Expect = 4.6
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Frame = +1
Query: 484 LYLRNLFFRTVYLLLAEIN-----PIFV-LEGDAPELKRDVMATRNAVQFRGAAPRSEK 642
LY RN+F ++LL ++N P+ V +EG PEL+ +++AT +R + EK
Sbjct: 20 LYCRNIFITLFFVLLFQVNSFAALPLEVTVEGVEPELRENILATLRLYVYRDSERMQEK 78
>UniRef50_Q6BH44 Cluster: Similar to CA2827|CaRAD2 Candida albicans
CaRAD2; n=1; Debaryomyces hansenii|Rep: Similar to
CA2827|CaRAD2 Candida albicans CaRAD2 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 1034
Score = 34.7 bits (76), Expect = 4.6
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDSQNVT---EHHVQPKLYLRNLFFRTVYLLLAEINPIFVLEGDAP 570
L + +AV S W+ E + P+ ++ F R LL I PIFV +G AP
Sbjct: 22 LSRKKLAVDASIWIYQFLKAVRDQEGNSMPQAHIVGFFRRICKLLYFGIYPIFVFDGGAP 81
Query: 571 ELKRDVMATR 600
LKR + R
Sbjct: 82 ALKRQTINQR 91
>UniRef50_Q754D7 Cluster: AFR133Cp; n=1; Eremothecium gossypii|Rep:
AFR133Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 970
Score = 34.3 bits (75), Expect = 6.1
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Frame = +1
Query: 502 FFRTVY-LLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSR 678
FFR + LL I P+FV +G P LKR+ + R R R A ++ KL +
Sbjct: 58 FFRRICKLLYFGIKPVFVFDGGVPPLKRETIRQRKE---RREGKRESAAVTARKLLALQV 114
Query: 679 KRFKNVLKECETLLKSMGVICLKGSGEAE 765
++ + + + KS G + + S E E
Sbjct: 115 QQQGDTAFKGNSRSKSEGSVTFRPSDEYE 143
>UniRef50_A3LTL9 Cluster: Predicted protein; n=2;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 992
Score = 34.3 bits (75), Expect = 6.1
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDSQNV---TEHHVQPKLYLRNLFFRTVYLLLAEINPIFVLEGDAP 570
L + +AV S W+ +E + P+ ++ F R LL I PIFV +G AP
Sbjct: 22 LSRKKLAVDASIWIYQFLKAVRDSEGNSLPQSHIVGFFRRICKLLYFGIFPIFVFDGGAP 81
Query: 571 ELKRDVMATR 600
LKR+ + R
Sbjct: 82 ALKRETINQR 91
>UniRef50_Q4Y208 Cluster: DNA repair endonuclease, putative; n=3;
Plasmodium (Vinckeia)|Rep: DNA repair endonuclease,
putative - Plasmodium chabaudi
Length = 1281
Score = 33.9 bits (74), Expect = 8.1
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 481 KLYLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRN 603
K +L F R LL I PIF+ +G PELK+ + RN
Sbjct: 79 KGHLYFFFLRICKLLYYNIRPIFIFDGTPPELKKRTIFQRN 119
>UniRef50_P28706 Cluster: DNA-repair protein rad13; n=1;
Schizosaccharomyces pombe|Rep: DNA-repair protein rad13
- Schizosaccharomyces pombe (Fission yeast)
Length = 1112
Score = 33.9 bits (74), Expect = 8.1
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 502 FFRTVY-LLLAEINPIFVLEGDAPELKRDVMATRNA 606
FFR + LL I P+FV +G AP LKR + R A
Sbjct: 58 FFRRICKLLFFGIKPVFVFDGGAPSLKRQTIQKRQA 93
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 849,146,541
Number of Sequences: 1657284
Number of extensions: 15884576
Number of successful extensions: 34400
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 33074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34364
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 116285896298
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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