Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_M02
         (1167 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_05_0016 + 20089545-20089748,20090072-20090263,20090644-200908...    74   3e-13
03_06_0576 + 34832900-34832911,34833006-34833122,34833752-348338...    56   7e-08
08_01_0011 - 81673-81724,81826-82161,82426-82556,82629-82729,828...    53   4e-07
03_02_0078 + 5476288-5476626,5477474-5477670,5477750-5477885,547...    31   1.3  
09_06_0192 - 21450158-21450276,21451084-21451573,21451750-214518...    29   7.1  

>09_05_0016 +
           20089545-20089748,20090072-20090263,20090644-20090814,
           20090915-20091096,20091189-20091435,20091776-20091908,
           20092070-20092599,20092940-20093170
          Length = 629

 Score = 73.7 bits (173), Expect = 3e-13
 Identities = 52/141 (36%), Positives = 72/141 (51%), Gaps = 9/141 (6%)
 Frame = +1

Query: 400 LRGETIAVXLSGWVCD-SQNVTEHHVQPKL-YLRNLFFRTVYLLLAE-INPIFVLEGDAP 570
           LRG  +AV LS WV   S  +       +L +LR LFFRT+ L       P+FV++G   
Sbjct: 23  LRGRRVAVDLSFWVVSHSAAIRARSPHARLPHLRTLFFRTLSLFSKMGAFPVFVVDGQPS 82

Query: 571 ELKRDVMATRNAVQFRG------AAPRSEKACSSEKLPNVSRKRFKNVLKECETLLKSMG 732
            LK  V A R    FRG      A P +E   S++ L      +F   +++C  LL+ +G
Sbjct: 83  PLKSQVRAARF---FRGSGMDLAALPSTEAEASADALVQPRNAKFTRYVEDCVELLEYLG 139

Query: 733 VICLKGSGEAEATCAQLNAEG 795
           +  L+  GE EA CAQLN +G
Sbjct: 140 MPVLRAKGEGEALCAQLNNQG 160


>03_06_0576 +
           34832900-34832911,34833006-34833122,34833752-34833810,
           34833901-34833960,34834197-34834250,34834332-34834380,
           34834493-34834540,34834889-34834954,34835591-34835641,
           34835732-34835851,34835921-34836005,34836428-34836509,
           34836666-34836774,34837005-34837051,34837131-34837188,
           34839114-34839220,34839700-34839765,34839833-34839879,
           34839977-34840042,34840146-34840243,34840344-34840469,
           34840551-34840835,34840920-34840985,34841079-34841228
          Length = 675

 Score = 55.6 bits (128), Expect = 7e-08
 Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
 Frame = +1

Query: 487 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKA--CSSEK 660
           +L+ +  RTV +L A I P+FV +G+ P++K+  +A R +++  G++    +A     E 
Sbjct: 64  HLQGMLNRTVRILEAGIKPVFVFDGEPPDMKKKELAKR-SLKRDGSSEDLNRAIEVGDED 122

Query: 661 LPNVSRKRFKNVLK----ECETLLKSMGVICLKGSGEAEATCAQL 783
           L     KR   V K    +C+ LL  MGV  ++  GEAEA CA L
Sbjct: 123 LIEKFSKRTVKVTKKHNEDCKRLLSLMGVPVVQAPGEAEAQCAAL 167


>08_01_0011 -
           81673-81724,81826-82161,82426-82556,82629-82729,
           82849-82931,83154-83253,83366-83513,83664-83723,
           84272-84345,84482-84554,84648-84699,84764-84897,
           85096-85288,85386-85453
          Length = 534

 Score = 53.2 bits (122), Expect = 4e-07
 Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 2/136 (1%)
 Frame = +1

Query: 400 LRGETIAVXLSGWVCD--SQNVTEHHVQPKLYLRNLFFRTVYLLLAEINPIFVLEGDAPE 573
           L+ + + V LS W+    S N +    + K+YL+NLF R   LL      +FV       
Sbjct: 22  LQNKKVCVDLSCWLVQMYSANRSPAFAKDKVYLKNLFHRIRALLALNCTLLFVTGNPILL 81

Query: 574 LKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKRFKNVLKECETLLKSMGVICLKGS 753
                +A + + Q     P S  + S   L       F  ++KE + L  ++G+ CL G 
Sbjct: 82  FYFSFLAAKESDQ-----PNSHPSIS---LRRNKGSEFSCMIKEAKRLGMALGIPCLDGL 133

Query: 754 GEAEATCAQLNAEGVC 801
            EAEA CA L+ E +C
Sbjct: 134 EEAEAQCASLDLESLC 149


>03_02_0078 +
           5476288-5476626,5477474-5477670,5477750-5477885,
           5478055-5478132,5478227-5478280,5478466-5478650,
           5478781-5480374,5480506-5480700,5480753-5480904,
           5481213-5481486,5481597-5481733,5482219-5482258,
           5482773-5483261,5483605-5484168
          Length = 1477

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
 Frame = +1

Query: 400 LRGETIAVXLSGWVCDSQNVTEHHVQPKL---YLRNLFFRTVYLLLAEINPIFVLEGDAP 570
           L G+ +AV  S W+              +   +L     R   LL     P+FV +G  P
Sbjct: 22  LAGKRLAVDASIWMVQFMRAMRDDKGDMIRDAHLLGFLRRICKLLFLRARPVFVFDGATP 81

Query: 571 ELKRDVMATRNAVQFRGAAPRSEKACSSEKL 663
            LKR  +A R   + R AA +++   ++EKL
Sbjct: 82  ALKRRTLAARR--RHRDAA-QAKVRKTAEKL 109


>09_06_0192 -
           21450158-21450276,21451084-21451573,21451750-21451862,
           21451992-21452376,21452461-21452529,21453165-21453264,
           21454465-21454637,21454737-21454782,21454879-21454954,
           21455160-21455196,21455799-21456041
          Length = 616

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 13/21 (61%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = -1

Query: 771 CCFSF-SATFKTYHSHTLEKS 712
           CCF F S T  TY SHT +KS
Sbjct: 182 CCFDFPSLTVSTYSSHTQKKS 202


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,601,181
Number of Sequences: 37544
Number of extensions: 421512
Number of successful extensions: 867
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3561544780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)