Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP25_F_M02
(1167 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC117206-1|AAI17207.1| 908|Homo sapiens hypothetical protein FL... 100 9e-21
BC117204-1|AAI17205.1| 908|Homo sapiens hypothetical protein FL... 100 9e-21
AK131387-1|BAD18538.1| 908|Homo sapiens protein ( Homo sapiens ... 100 9e-21
X76771-1|CAA54166.1| 380|Homo sapiens flap endonuclease-1 protein. 54 1e-06
L37374-1|AAA91331.1| 380|Homo sapiens endonuclease protein. 54 1e-06
CR536562-1|CAG38799.1| 380|Homo sapiens FEN1 protein. 54 1e-06
BT019524-1|AAV38331.1| 380|Homo sapiens flap structure-specific... 54 1e-06
BC000323-1|AAH00323.1| 380|Homo sapiens flap structure-specific... 54 1e-06
AF523117-1|AAM74238.1| 380|Homo sapiens flap structure-specific... 54 1e-06
AC004770-3|AAC23394.1| 380|Homo sapiens FEN1_HUMAN protein. 54 1e-06
X69978-1|CAA49598.1| 1186|Homo sapiens XP-G factor protein. 45 6e-04
L20046-1|AAC37533.1| 1186|Homo sapiens excision repair protein p... 45 6e-04
BC031522-1|AAH31522.1| 1186|Homo sapiens excision repair cross-c... 45 6e-04
AL157769-8|CAI14530.1| 1186|Homo sapiens excision repair cross-c... 45 6e-04
AL157769-7|CAI14529.1| 142|Homo sapiens excision repair cross-c... 45 6e-04
AF550128-1|AAN46091.1| 1186|Homo sapiens excision repair cross-c... 45 6e-04
AF462447-1|AAP97715.1| 1186|Homo sapiens excision repair protein... 45 6e-04
AF255442-1|AAF89179.1| 1186|Homo sapiens xeroderma pigmentosum c... 45 6e-04
AF255436-1|AAF89178.1| 232|Homo sapiens xeroderma pigmentosum c... 45 6e-04
X71341-1|CAA50481.1| 88|Homo sapiens xeroderma pigmentosum gro... 42 0.004
D16305-1|BAA03812.1| 1185|Homo sapiens ERCC5 protein. 42 0.004
AB209312-1|BAD92549.1| 1611|Homo sapiens DNA-repair protein comp... 39 0.030
Y19205-1|CAC80724.1| 845|Homo sapiens SLITL1 protein. 32 3.5
BC113012-1|AAI13013.1| 845|Homo sapiens SLIT and NTRK-like fami... 32 3.5
BC113011-1|AAI13012.1| 845|Homo sapiens SLIT and NTRK-like fami... 32 3.5
AY358828-1|AAQ89187.1| 733|Homo sapiens LSGV9197 protein. 32 3.5
AL109653-2|CAC18888.1| 845|Homo sapiens SLIT and NTRK-like fami... 32 3.5
AL109653-1|CAI41645.1| 724|Homo sapiens SLIT and NTRK-like fami... 32 3.5
AK091015-1|BAC03566.1| 724|Homo sapiens protein ( Homo sapiens ... 32 3.5
BC115415-1|AAI15416.1| 522|Homo sapiens C21orf29 protein protein. 31 8.0
BC111762-1|AAI11763.1| 496|Homo sapiens UBAP2 protein protein. 31 8.0
BC021197-1|AAH21197.2| 583|Homo sapiens C21orf29 protein protein. 31 8.0
AY358682-1|AAQ89045.1| 363|Homo sapiens UBAP2 protein. 31 8.0
AL354989-1|CAI15298.1| 1119|Homo sapiens ubiquitin associated pr... 31 8.0
AL139113-9|CAM13517.1| 325|Homo sapiens ubiquitin associated pr... 31 8.0
AL139113-5|CAI39657.1| 1119|Homo sapiens ubiquitin associated pr... 31 8.0
AK074884-1|BAC11266.1| 597|Homo sapiens protein ( Homo sapiens ... 31 8.0
AJ487962-1|CAD32309.1| 669|Homo sapiens TSP-EAR protein protein. 31 8.0
AB040924-1|BAA96015.1| 757|Homo sapiens KIAA1491 protein protein. 31 8.0
>BC117206-1|AAI17207.1| 908|Homo sapiens hypothetical protein
FLJ40869 protein.
Length = 908
Score = 100 bits (240), Expect = 9e-21
Identities = 58/133 (43%), Positives = 86/133 (64%), Gaps = 1/133 (0%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDSQNVTEHHVQP-KLYLRNLFFRTVYLLLAEINPIFVLEGDAPEL 576
L G+TIAV LS WVC++Q V + K +LRNLFFR YL ++ +FV+EG+ P+L
Sbjct: 22 LGGKTIAVDLSLWVCEAQTVKKMMGSVMKPHLRNLFFRISYLTQMDVKLVFVMEGEPPKL 81
Query: 577 KRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKRFKNVLKECETLLKSMGVICLKGSG 756
K DV++ RN ++ G++ +S S+K R FK+VL+EC +L+ +G+ ++ +G
Sbjct: 82 KADVISKRNQTRY-GSSGKS----WSQK---TGRSHFKSVLRECLHMLECLGIPWVQAAG 133
Query: 757 EAEATCAQLNAEG 795
EAEA CA LNA G
Sbjct: 134 EAEAMCAYLNAGG 146
>BC117204-1|AAI17205.1| 908|Homo sapiens hypothetical protein
FLJ40869 protein.
Length = 908
Score = 100 bits (240), Expect = 9e-21
Identities = 58/133 (43%), Positives = 86/133 (64%), Gaps = 1/133 (0%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDSQNVTEHHVQP-KLYLRNLFFRTVYLLLAEINPIFVLEGDAPEL 576
L G+TIAV LS WVC++Q V + K +LRNLFFR YL ++ +FV+EG+ P+L
Sbjct: 22 LGGKTIAVDLSLWVCEAQTVKKMMGSVMKPHLRNLFFRISYLTQMDVKLVFVMEGEPPKL 81
Query: 577 KRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKRFKNVLKECETLLKSMGVICLKGSG 756
K DV++ RN ++ G++ +S S+K R FK+VL+EC +L+ +G+ ++ +G
Sbjct: 82 KADVISKRNQTRY-GSSGKS----WSQK---TGRSHFKSVLRECLHMLECLGIPWVQAAG 133
Query: 757 EAEATCAQLNAEG 795
EAEA CA LNA G
Sbjct: 134 EAEAMCAYLNAGG 146
>AK131387-1|BAD18538.1| 908|Homo sapiens protein ( Homo sapiens
cDNA FLJ16464 fis, clone BRHIP2012360. ).
Length = 908
Score = 100 bits (240), Expect = 9e-21
Identities = 58/133 (43%), Positives = 86/133 (64%), Gaps = 1/133 (0%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDSQNVTEHHVQP-KLYLRNLFFRTVYLLLAEINPIFVLEGDAPEL 576
L G+TIAV LS WVC++Q V + K +LRNLFFR YL ++ +FV+EG+ P+L
Sbjct: 22 LGGKTIAVDLSLWVCEAQTVKKMMGSVMKPHLRNLFFRISYLTQMDVKLVFVMEGEPPKL 81
Query: 577 KRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKRFKNVLKECETLLKSMGVICLKGSG 756
K DV++ RN ++ G++ +S S+K R FK+VL+EC +L+ +G+ ++ +G
Sbjct: 82 KADVISKRNQTRY-GSSGKS----WSQK---TGRSHFKSVLRECLHMLECLGIPWVQAAG 133
Query: 757 EAEATCAQLNAEG 795
EAEA CA LNA G
Sbjct: 134 EAEAMCAYLNAGG 146
>X76771-1|CAA54166.1| 380|Homo sapiens flap endonuclease-1 protein.
Length = 380
Score = 54.0 bits (124), Expect = 1e-06
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Frame = +1
Query: 487 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAP-RSEKACSSEKL 663
+L +F+RT+ ++ I P++V +G P+LK +A R+ + + +A +E+
Sbjct: 63 HLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAEQE 122
Query: 664 PNVSRKRFKNVLK----ECETLLKSMGVICLKGSGEAEATCAQLNAEG 795
KR V K EC+ LL MG+ L EAEA+CA L G
Sbjct: 123 VEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAG 170
>L37374-1|AAA91331.1| 380|Homo sapiens endonuclease protein.
Length = 380
Score = 54.0 bits (124), Expect = 1e-06
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Frame = +1
Query: 487 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAP-RSEKACSSEKL 663
+L +F+RT+ ++ I P++V +G P+LK +A R+ + + +A +E+
Sbjct: 63 HLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAEQE 122
Query: 664 PNVSRKRFKNVLK----ECETLLKSMGVICLKGSGEAEATCAQLNAEG 795
KR V K EC+ LL MG+ L EAEA+CA L G
Sbjct: 123 VEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAG 170
>CR536562-1|CAG38799.1| 380|Homo sapiens FEN1 protein.
Length = 380
Score = 54.0 bits (124), Expect = 1e-06
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Frame = +1
Query: 487 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAP-RSEKACSSEKL 663
+L +F+RT+ ++ I P++V +G P+LK +A R+ + + +A +E+
Sbjct: 63 HLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAEQE 122
Query: 664 PNVSRKRFKNVLK----ECETLLKSMGVICLKGSGEAEATCAQLNAEG 795
KR V K EC+ LL MG+ L EAEA+CA L G
Sbjct: 123 VEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAG 170
>BT019524-1|AAV38331.1| 380|Homo sapiens flap structure-specific
endonuclease 1 protein.
Length = 380
Score = 54.0 bits (124), Expect = 1e-06
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Frame = +1
Query: 487 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAP-RSEKACSSEKL 663
+L +F+RT+ ++ I P++V +G P+LK +A R+ + + +A +E+
Sbjct: 63 HLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAEQE 122
Query: 664 PNVSRKRFKNVLK----ECETLLKSMGVICLKGSGEAEATCAQLNAEG 795
KR V K EC+ LL MG+ L EAEA+CA L G
Sbjct: 123 VEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAG 170
>BC000323-1|AAH00323.1| 380|Homo sapiens flap structure-specific
endonuclease 1 protein.
Length = 380
Score = 54.0 bits (124), Expect = 1e-06
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Frame = +1
Query: 487 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAP-RSEKACSSEKL 663
+L +F+RT+ ++ I P++V +G P+LK +A R+ + + +A +E+
Sbjct: 63 HLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAEQE 122
Query: 664 PNVSRKRFKNVLK----ECETLLKSMGVICLKGSGEAEATCAQLNAEG 795
KR V K EC+ LL MG+ L EAEA+CA L G
Sbjct: 123 VEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAG 170
>AF523117-1|AAM74238.1| 380|Homo sapiens flap structure-specific
endonuclease 1 protein.
Length = 380
Score = 54.0 bits (124), Expect = 1e-06
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Frame = +1
Query: 487 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAP-RSEKACSSEKL 663
+L +F+RT+ ++ I P++V +G P+LK +A R+ + + +A +E+
Sbjct: 63 HLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAEQE 122
Query: 664 PNVSRKRFKNVLK----ECETLLKSMGVICLKGSGEAEATCAQLNAEG 795
KR V K EC+ LL MG+ L EAEA+CA L G
Sbjct: 123 VEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAG 170
>AC004770-3|AAC23394.1| 380|Homo sapiens FEN1_HUMAN protein.
Length = 380
Score = 54.0 bits (124), Expect = 1e-06
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Frame = +1
Query: 487 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAP-RSEKACSSEKL 663
+L +F+RT+ ++ I P++V +G P+LK +A R+ + + +A +E+
Sbjct: 63 HLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAEQE 122
Query: 664 PNVSRKRFKNVLK----ECETLLKSMGVICLKGSGEAEATCAQLNAEG 795
KR V K EC+ LL MG+ L EAEA+CA L G
Sbjct: 123 VEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAG 170
>X69978-1|CAA49598.1| 1186|Homo sapiens XP-G factor protein.
Length = 1186
Score = 44.8 bits (101), Expect = 6e-04
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDS-QNVTEHHVQP--KLYLRNLFFRTVYLLLAEINPIFVLEGDAP 570
L G+ +AV +S W+ + + V + H +L LF R LL I PIFV +GDAP
Sbjct: 22 LEGKILAVDISIWLNQALKGVRDRHGNSIENPHLLTLFHRLCKLLFFRIRPIFVFDGDAP 81
Query: 571 ELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKR 684
LK+ + R R S+ ++EKL KR
Sbjct: 82 LLKKQTLVKRRQ---RKDLASSDSRKTTEKLLKTFLKR 116
>L20046-1|AAC37533.1| 1186|Homo sapiens excision repair protein
protein.
Length = 1186
Score = 44.8 bits (101), Expect = 6e-04
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDS-QNVTEHHVQP--KLYLRNLFFRTVYLLLAEINPIFVLEGDAP 570
L G+ +AV +S W+ + + V + H +L LF R LL I PIFV +GDAP
Sbjct: 22 LEGKILAVDISIWLNQALKGVRDRHGNSIENPHLLTLFHRLCKLLFFRIRPIFVFDGDAP 81
Query: 571 ELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKR 684
LK+ + R R S+ ++EKL KR
Sbjct: 82 LLKKQTLVKRRQ---RKDLASSDSRKTTEKLLKTFLKR 116
>BC031522-1|AAH31522.1| 1186|Homo sapiens excision repair
cross-complementing rodent repair deficiency,
complementation g protein.
Length = 1186
Score = 44.8 bits (101), Expect = 6e-04
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDS-QNVTEHHVQP--KLYLRNLFFRTVYLLLAEINPIFVLEGDAP 570
L G+ +AV +S W+ + + V + H +L LF R LL I PIFV +GDAP
Sbjct: 22 LEGKILAVDISIWLNQALKGVRDRHGNSIENPHLLTLFHRLCKLLFFRIRPIFVFDGDAP 81
Query: 571 ELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKR 684
LK+ + R R S+ ++EKL KR
Sbjct: 82 LLKKQTLVKRRQ---RKDLASSDSRKTTEKLLKTFLKR 116
>AL157769-8|CAI14530.1| 1186|Homo sapiens excision repair
cross-complementing rodent repairt protein.
Length = 1186
Score = 44.8 bits (101), Expect = 6e-04
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDS-QNVTEHHVQP--KLYLRNLFFRTVYLLLAEINPIFVLEGDAP 570
L G+ +AV +S W+ + + V + H +L LF R LL I PIFV +GDAP
Sbjct: 22 LEGKILAVDISIWLNQALKGVRDRHGNSIENPHLLTLFHRLCKLLFFRIRPIFVFDGDAP 81
Query: 571 ELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKR 684
LK+ + R R S+ ++EKL KR
Sbjct: 82 LLKKQTLVKRRQ---RKDLASSDSRKTTEKLLKTFLKR 116
>AL157769-7|CAI14529.1| 142|Homo sapiens excision repair
cross-complementing rodent repairt protein.
Length = 142
Score = 44.8 bits (101), Expect = 6e-04
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDS-QNVTEHHVQP--KLYLRNLFFRTVYLLLAEINPIFVLEGDAP 570
L G+ +AV +S W+ + + V + H +L LF R LL I PIFV +GDAP
Sbjct: 22 LEGKILAVDISIWLNQALKGVRDRHGNSIENPHLLTLFHRLCKLLFFRIRPIFVFDGDAP 81
Query: 571 ELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKR 684
LK+ + R R S+ ++EKL KR
Sbjct: 82 LLKKQTLVKRRQ---RKDLASSDSRKTTEKLLKTFLKR 116
>AF550128-1|AAN46091.1| 1186|Homo sapiens excision repair
cross-complementing rodent repair deficiency,
complementation g protein.
Length = 1186
Score = 44.8 bits (101), Expect = 6e-04
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDS-QNVTEHHVQP--KLYLRNLFFRTVYLLLAEINPIFVLEGDAP 570
L G+ +AV +S W+ + + V + H +L LF R LL I PIFV +GDAP
Sbjct: 22 LEGKILAVDISIWLNQALKGVRDRHGNSIENPHLLTLFHRLCKLLFFRIRPIFVFDGDAP 81
Query: 571 ELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKR 684
LK+ + R R S+ ++EKL KR
Sbjct: 82 LLKKQTLVKRRQ---RKDLASSDSRKTTEKLLKTFLKR 116
>AF462447-1|AAP97715.1| 1186|Homo sapiens excision repair protein
ERCC5 protein.
Length = 1186
Score = 44.8 bits (101), Expect = 6e-04
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDS-QNVTEHHVQP--KLYLRNLFFRTVYLLLAEINPIFVLEGDAP 570
L G+ +AV +S W+ + + V + H +L LF R LL I PIFV +GDAP
Sbjct: 22 LEGKILAVDISIWLNQALKGVRDRHGNSIENPHLLTLFHRLCKLLFFRIRPIFVFDGDAP 81
Query: 571 ELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKR 684
LK+ + R R S+ ++EKL KR
Sbjct: 82 LLKKQTLVKRRQ---RKDLASSDSRKTTEKLLKTFLKR 116
>AF255442-1|AAF89179.1| 1186|Homo sapiens xeroderma pigmentosum
complementation group G protein splice variant protein.
Length = 1186
Score = 44.8 bits (101), Expect = 6e-04
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDS-QNVTEHHVQP--KLYLRNLFFRTVYLLLAEINPIFVLEGDAP 570
L G+ +AV +S W+ + + V + H +L LF R LL I PIFV +GDAP
Sbjct: 22 LEGKILAVDISIWLNQALKGVRDRHGNSIENPHLLTLFHRLCKLLFFRIRPIFVFDGDAP 81
Query: 571 ELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKR 684
LK+ + R R S+ ++EKL KR
Sbjct: 82 LLKKQTLVKRRQ---RKDLASSDSRKTTEKLLKTFLKR 116
>AF255436-1|AAF89178.1| 232|Homo sapiens xeroderma pigmentosum
complementation group G protein splice variant protein.
Length = 232
Score = 44.8 bits (101), Expect = 6e-04
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDS-QNVTEHHVQP--KLYLRNLFFRTVYLLLAEINPIFVLEGDAP 570
L G+ +AV +S W+ + + V + H +L LF R LL I PIFV +GDAP
Sbjct: 22 LEGKILAVDISIWLNQALKGVRDRHGNSIENPHLLTLFHRLCKLLFFRIRPIFVFDGDAP 81
Query: 571 ELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKR 684
LK+ + R R S+ ++EKL KR
Sbjct: 82 LLKKQTLVKRRQ---RKDLASSDSRKTTEKLLKTFLKR 116
>X71341-1|CAA50481.1| 88|Homo sapiens xeroderma pigmentosum group
G complementing factor protein.
Length = 88
Score = 41.9 bits (94), Expect = 0.004
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDS-QNVTEHHVQP--KLYLRNLFFRTVYLLLAEINPIFVLEGDAP 570
L G+ +AV +S W+ + + V + H +L LF R LL I PIFV +GDAP
Sbjct: 22 LEGKILAVDISIWLNQALKGVRDRHGNSIENPHLLTLFHRLCKLLFFRIRPIFVFDGDAP 81
Query: 571 ELKRDVM 591
LK+ +
Sbjct: 82 LLKKQTL 88
>D16305-1|BAA03812.1| 1185|Homo sapiens ERCC5 protein.
Length = 1185
Score = 41.9 bits (94), Expect = 0.004
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +1
Query: 400 LRGETIAVXLSGWVCDS-QNVTEHHVQP--KLYLRNLFFRTVYLLLAEINPIFVLEGDAP 570
L G+ +AV +S W+ + + V + H + LF R LL I PIFV +GDAP
Sbjct: 22 LEGKILAVDISIWLNQALKGVRDRHGNSIENPHPLTLFHRLCKLLFFRIRPIFVFDGDAP 81
Query: 571 ELKRDVMATRNAVQFRGAAPRSEKACSSEKLPNVSRKR 684
LK+ + R R S+ ++EKL KR
Sbjct: 82 LLKKQTLVKRRQ---RKDLASSDSRKTTEKLLKTFLKR 116
>AB209312-1|BAD92549.1| 1611|Homo sapiens DNA-repair protein
complementing XP-G cells variant protein.
Length = 1611
Score = 39.1 bits (87), Expect = 0.030
Identities = 25/66 (37%), Positives = 32/66 (48%)
Frame = +1
Query: 487 YLRNLFFRTVYLLLAEINPIFVLEGDAPELKRDVMATRNAVQFRGAAPRSEKACSSEKLP 666
+L LF R LL I PIFV +GDAP LK+ + R R S+ ++EKL
Sbjct: 479 HLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQ---RKDLASSDSRKTTEKLL 535
Query: 667 NVSRKR 684
KR
Sbjct: 536 KTFLKR 541
>Y19205-1|CAC80724.1| 845|Homo sapiens SLITL1 protein.
Length = 845
Score = 32.3 bits (70), Expect = 3.5
Identities = 14/54 (25%), Positives = 33/54 (61%)
Frame = +2
Query: 785 MLKVYVLKQCRKNIHLLIYLFKKKKGLSSLVHSSKHIIVIA*TIVHGNFXCETH 946
+L V++L C L +++ K++KG+ S+ ++ ++ V + + +G++ ETH
Sbjct: 625 LLVVFILSVCF-GAGLFVFVLKRRKGVPSVPRNTNNLDVSSFQLQYGSYNTETH 677
>BC113012-1|AAI13013.1| 845|Homo sapiens SLIT and NTRK-like family,
member 2 protein.
Length = 845
Score = 32.3 bits (70), Expect = 3.5
Identities = 14/54 (25%), Positives = 33/54 (61%)
Frame = +2
Query: 785 MLKVYVLKQCRKNIHLLIYLFKKKKGLSSLVHSSKHIIVIA*TIVHGNFXCETH 946
+L V++L C L +++ K++KG+ S+ ++ ++ V + + +G++ ETH
Sbjct: 625 LLVVFILSVCF-GAGLFVFVLKRRKGVPSVPRNTNNLDVSSFQLQYGSYNTETH 677
>BC113011-1|AAI13012.1| 845|Homo sapiens SLIT and NTRK-like family,
member 2 protein.
Length = 845
Score = 32.3 bits (70), Expect = 3.5
Identities = 14/54 (25%), Positives = 33/54 (61%)
Frame = +2
Query: 785 MLKVYVLKQCRKNIHLLIYLFKKKKGLSSLVHSSKHIIVIA*TIVHGNFXCETH 946
+L V++L C L +++ K++KG+ S+ ++ ++ V + + +G++ ETH
Sbjct: 625 LLVVFILSVCF-GAGLFVFVLKRRKGVPSVPRNTNNLDVSSFQLQYGSYNTETH 677
>AY358828-1|AAQ89187.1| 733|Homo sapiens LSGV9197 protein.
Length = 733
Score = 32.3 bits (70), Expect = 3.5
Identities = 14/54 (25%), Positives = 33/54 (61%)
Frame = +2
Query: 785 MLKVYVLKQCRKNIHLLIYLFKKKKGLSSLVHSSKHIIVIA*TIVHGNFXCETH 946
+L V++L C L +++ K++KG+ S+ ++ ++ V + + +G++ ETH
Sbjct: 625 LLVVFILSVCF-GAGLFVFVLKRRKGVPSVPRNTNNLDVSSFQLQYGSYNTETH 677
>AL109653-2|CAC18888.1| 845|Homo sapiens SLIT and NTRK-like family,
member 2 protein.
Length = 845
Score = 32.3 bits (70), Expect = 3.5
Identities = 14/54 (25%), Positives = 33/54 (61%)
Frame = +2
Query: 785 MLKVYVLKQCRKNIHLLIYLFKKKKGLSSLVHSSKHIIVIA*TIVHGNFXCETH 946
+L V++L C L +++ K++KG+ S+ ++ ++ V + + +G++ ETH
Sbjct: 625 LLVVFILSVCF-GAGLFVFVLKRRKGVPSVPRNTNNLDVSSFQLQYGSYNTETH 677
>AL109653-1|CAI41645.1| 724|Homo sapiens SLIT and NTRK-like family,
member 2 protein.
Length = 724
Score = 32.3 bits (70), Expect = 3.5
Identities = 14/54 (25%), Positives = 33/54 (61%)
Frame = +2
Query: 785 MLKVYVLKQCRKNIHLLIYLFKKKKGLSSLVHSSKHIIVIA*TIVHGNFXCETH 946
+L V++L C L +++ K++KG+ S+ ++ ++ V + + +G++ ETH
Sbjct: 625 LLVVFILSVCF-GAGLFVFVLKRRKGVPSVPRNTNNLDVSSFQLQYGSYNTETH 677
>AK091015-1|BAC03566.1| 724|Homo sapiens protein ( Homo sapiens
cDNA FLJ33696 fis, clone BRAWH2003964, weakly similar to
SLIT PROTEIN PRECURSOR. ).
Length = 724
Score = 32.3 bits (70), Expect = 3.5
Identities = 14/54 (25%), Positives = 33/54 (61%)
Frame = +2
Query: 785 MLKVYVLKQCRKNIHLLIYLFKKKKGLSSLVHSSKHIIVIA*TIVHGNFXCETH 946
+L V++L C L +++ K++KG+ S+ ++ ++ V + + +G++ ETH
Sbjct: 625 LLVVFILSVCF-GAGLFVFVLKRRKGVPSVPRNTNNLDVSSFQLQYGSYNTETH 677
>BC115415-1|AAI15416.1| 522|Homo sapiens C21orf29 protein protein.
Length = 522
Score = 31.1 bits (67), Expect = 8.0
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -2
Query: 704 SFKTFLNLFLETLGSFSLEQAFSDLGAAPRNWTAFRVAITSLLSSGASPS 555
S K +L++ LGSF L Q+F GAA +W F++ L+ S S
Sbjct: 353 STKVHSHLYIRLLGSFQLFQSFPTFGAA--DWEVFQIGERIFLAVANSHS 400
>BC111762-1|AAI11763.1| 496|Homo sapiens UBAP2 protein protein.
Length = 496
Score = 31.1 bits (67), Expect = 8.0
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -2
Query: 695 TFLNLFLETLGSFSLEQAFSDLGAAPRNWTAFRVAITSLLSSGASPSNTNIGFISA--NS 522
T LN+ L F E + S+ G+AP + + ++ I+ S + P NT++ SA NS
Sbjct: 357 TGLNVQFGAL-EFGSEPSLSEFGSAPSSENSNQIPISLYSKSLSEPLNTSLSMTSAVQNS 415
Query: 521 RYT 513
YT
Sbjct: 416 TYT 418
>BC021197-1|AAH21197.2| 583|Homo sapiens C21orf29 protein protein.
Length = 583
Score = 31.1 bits (67), Expect = 8.0
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -2
Query: 704 SFKTFLNLFLETLGSFSLEQAFSDLGAAPRNWTAFRVAITSLLSSGASPS 555
S K +L++ LGSF L Q+F GAA +W F++ L+ S S
Sbjct: 485 STKVHSHLYIRLLGSFQLFQSFPTFGAA--DWEVFQIGERIFLAVANSHS 532
>AY358682-1|AAQ89045.1| 363|Homo sapiens UBAP2 protein.
Length = 363
Score = 31.1 bits (67), Expect = 8.0
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -2
Query: 695 TFLNLFLETLGSFSLEQAFSDLGAAPRNWTAFRVAITSLLSSGASPSNTNIGFISA--NS 522
T LN+ L F E + S+ G+AP + + ++ I+ S + P NT++ SA NS
Sbjct: 201 TGLNVQFGAL-EFGSEPSLSEFGSAPSSENSNQIPISLYSKSLSEPLNTSLSMTSAVQNS 259
Query: 521 RYT 513
YT
Sbjct: 260 TYT 262
>AL354989-1|CAI15298.1| 1119|Homo sapiens ubiquitin associated
protein 2 protein.
Length = 1119
Score = 31.1 bits (67), Expect = 8.0
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -2
Query: 695 TFLNLFLETLGSFSLEQAFSDLGAAPRNWTAFRVAITSLLSSGASPSNTNIGFISA--NS 522
T LN+ L F E + S+ G+AP + + ++ I+ S + P NT++ SA NS
Sbjct: 530 TGLNVQFGAL-EFGSEPSLSEFGSAPSSENSNQIPISLYSKSLSEPLNTSLSMTSAVQNS 588
Query: 521 RYT 513
YT
Sbjct: 589 TYT 591
>AL139113-9|CAM13517.1| 325|Homo sapiens ubiquitin associated
protein 2 protein.
Length = 325
Score = 31.1 bits (67), Expect = 8.0
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -2
Query: 695 TFLNLFLETLGSFSLEQAFSDLGAAPRNWTAFRVAITSLLSSGASPSNTNIGFISA--NS 522
T LN+ L F E + S+ G+AP + + ++ I+ S + P NT++ SA NS
Sbjct: 163 TGLNVQFGAL-EFGSEPSLSEFGSAPSSENSNQIPISLYSKSLSEPLNTSLSMTSAVQNS 221
Query: 521 RYT 513
YT
Sbjct: 222 TYT 224
>AL139113-5|CAI39657.1| 1119|Homo sapiens ubiquitin associated
protein 2 protein.
Length = 1119
Score = 31.1 bits (67), Expect = 8.0
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -2
Query: 695 TFLNLFLETLGSFSLEQAFSDLGAAPRNWTAFRVAITSLLSSGASPSNTNIGFISA--NS 522
T LN+ L F E + S+ G+AP + + ++ I+ S + P NT++ SA NS
Sbjct: 530 TGLNVQFGAL-EFGSEPSLSEFGSAPSSENSNQIPISLYSKSLSEPLNTSLSMTSAVQNS 588
Query: 521 RYT 513
YT
Sbjct: 589 TYT 591
>AK074884-1|BAC11266.1| 597|Homo sapiens protein ( Homo sapiens
cDNA FLJ90403 fis, clone NT2RP2006042, weakly similar to
GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
Length = 597
Score = 31.1 bits (67), Expect = 8.0
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -2
Query: 695 TFLNLFLETLGSFSLEQAFSDLGAAPRNWTAFRVAITSLLSSGASPSNTNIGFISA--NS 522
T LN+ L F E + S+ G+AP + + ++ I+ S + P NT++ SA NS
Sbjct: 8 TGLNVQFGAL-EFGSEPSLSEFGSAPSSENSNQIPISLYSKSLSEPLNTSLSMTSAVQNS 66
Query: 521 RYT 513
YT
Sbjct: 67 TYT 69
>AJ487962-1|CAD32309.1| 669|Homo sapiens TSP-EAR protein protein.
Length = 669
Score = 31.1 bits (67), Expect = 8.0
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -2
Query: 704 SFKTFLNLFLETLGSFSLEQAFSDLGAAPRNWTAFRVAITSLLSSGASPS 555
S K +L++ LGSF L Q+F GAA +W F++ L+ S S
Sbjct: 500 STKVHSHLYIRLLGSFQLFQSFPTFGAA--DWEVFQIGERIFLAVANSHS 547
>AB040924-1|BAA96015.1| 757|Homo sapiens KIAA1491 protein protein.
Length = 757
Score = 31.1 bits (67), Expect = 8.0
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -2
Query: 695 TFLNLFLETLGSFSLEQAFSDLGAAPRNWTAFRVAITSLLSSGASPSNTNIGFISA--NS 522
T LN+ L F E + S+ G+AP + + ++ I+ S + P NT++ SA NS
Sbjct: 168 TGLNVQFGAL-EFGSEPSLSEFGSAPSSENSNQIPISLYSKSLSEPLNTSLSMTSAVQNS 226
Query: 521 RYT 513
YT
Sbjct: 227 TYT 229
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,660,955
Number of Sequences: 237096
Number of extensions: 2443605
Number of successful extensions: 3754
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 3579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3741
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16293684080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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