Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP25_F_M01
         (1173 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    25   0.83 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   3.4  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   3.4  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   5.9  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    23   5.9  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 25.4 bits (53), Expect = 0.83
 Identities = 13/51 (25%), Positives = 25/51 (49%)
 Frame = +2

Query: 515 VATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVY 667
           +  +  +D K E H+E+  A + E+R+  +   +G+  T   L    + VY
Sbjct: 172 IVGESVIDEKAEEHKEQFTALVREIRNAFRH--DGLLLTMSVLPNVNSSVY 220


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 763 NLFLMFAQTLDHLLEVLVTLVGSCG 689
           NL+L     +  L++  +TLV  CG
Sbjct: 266 NLYLKHKLEISSLVQTAITLVAMCG 290


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2

Query: 230 AMEVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSP 355
           A    T  T+++  + S       V  A P G+P P  + SP
Sbjct: 194 ASRTTTSPTKVKASKASPAAAPRSV--ATPTGIPTPSTSASP 233


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 836 PAAASPGWRSRAAGTSPGYRRGPCELVPH 750
           P+ +SP   S +A TSP  R  P     H
Sbjct: 40  PSGSSPQHSSSSASTSPAARMYPYVSAAH 68


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 836 PAAASPGWRSRAAGTSPGYRRGPCELVPH 750
           P+ +SP   S +A TSP  R  P     H
Sbjct: 40  PSGSSPQHSSSSASTSPAARMYPYVSAAH 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,381
Number of Sequences: 336
Number of extensions: 2783
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 34228204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)